BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027022
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632308.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransf...   296   2e-78
ref|XP_002307594.1| predicted protein [Populus trichocarpa] gi|2...   278   7e-73
ref|XP_002524762.1| WD-repeat protein, putative [Ricinus communi...   275   5e-72
ref|XP_003553467.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransf...   267   2e-69
ref|NP_563675.1| transducin/WD-40 repeat-containing protein [Ara...   266   3e-69

>ref|XP_003632308.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransferase subunit WDR4-like
           [Vitis vinifera] gi|296085216|emb|CBI28711.3| unnamed
           protein product [Vitis vinifera]
          Length = 433

 Score =  296 bits (758), Expect = 2e-78
 Identities = 144/201 (71%), Positives = 167/201 (83%), Gaps = 4/201 (1%)
 Frame = -1

Query: 592 EVAPALIAIHPVEKSVVVAIGSELRVFDLQEDCASSLVDDSGRPLHMDSIRAISFGADGR 413
           EVAPALI++HP  K +VV+IGS+LRVFDLQ  C+ +LVDDS  PLH DSIRAI FGA+G+
Sbjct: 16  EVAPALISVHPDHKFIVVSIGSDLRVFDLQGGCSVTLVDDSSGPLHKDSIRAIRFGAEGK 75

Query: 412 LFVSAGDDKLVKIWTTNPWHCIRTVLSEKRASALAISPDNLFVSFADKFGVVWVVSTEVD 233
           LFVSAGDDKLVKIW  N WHCI TV SEKR SA+AIS D LFV FADKFGVVW ++ +  
Sbjct: 76  LFVSAGDDKLVKIWNANSWHCISTVCSEKRVSAVAISKDGLFVCFADKFGVVWALNLDGF 135

Query: 232 DERK----DEASPIFAHYCSIITSLEFSPDGRFIVSADRDFKIRVTVFPKRPLSGAHEIQ 65
           DE +     +A+P+ AHYCSIITSLEFS DGRFI+SADRDFKIRV+VFPK+PL GAHEIQ
Sbjct: 136 DENQVLVDKKAAPVLAHYCSIITSLEFSLDGRFIISADRDFKIRVSVFPKKPLDGAHEIQ 195

Query: 64  SFCLGHTEFVTCLSFVCTQEY 2
           SFCLGHTEFV+CL+FVC  +Y
Sbjct: 196 SFCLGHTEFVSCLAFVCAPDY 216


>ref|XP_002307594.1| predicted protein [Populus trichocarpa] gi|222857043|gb|EEE94590.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score =  278 bits (711), Expect = 7e-73
 Identities = 135/201 (67%), Positives = 163/201 (81%), Gaps = 4/201 (1%)
 Frame = -1

Query: 592 EVAPALIAIHPVEKSVVVAIGSELRVFDLQEDCASSLVDDSGRPLHMDSIRAISFGADGR 413
           EVAPALI++HP + SV VA+GS+LR FDL+ +C  +LVD++G   H DSIRAI +GA G+
Sbjct: 16  EVAPALISVHPTQDSVAVAVGSDLRFFDLRGNCGVTLVDETGEAFHKDSIRAIRYGAKGK 75

Query: 412 LFVSAGDDKLVKIWTTNPWHCIRTVLSEKRASALAISPDNLFVSFADKFGVVWVVSTEVD 233
           LFVSAGDDKLVK+W+T+ W CI +V SEKR SA+AIS D L+V FADKFGVVWVV     
Sbjct: 76  LFVSAGDDKLVKVWSTDSWRCIASVCSEKRVSAVAISNDGLYVCFADKFGVVWVVDLRGL 135

Query: 232 DERK----DEASPIFAHYCSIITSLEFSPDGRFIVSADRDFKIRVTVFPKRPLSGAHEIQ 65
           D  +     +A+P+ AHYCSIITSLEFSPDG FIV+ADRDFKIRVTVFPK+PL GAHEIQ
Sbjct: 136 DGNETLVNKKAAPLLAHYCSIITSLEFSPDGWFIVTADRDFKIRVTVFPKKPLDGAHEIQ 195

Query: 64  SFCLGHTEFVTCLSFVCTQEY 2
           SFCLGHTEFV+CL+F+ T +Y
Sbjct: 196 SFCLGHTEFVSCLAFLVTVDY 216


>ref|XP_002524762.1| WD-repeat protein, putative [Ricinus communis]
           gi|223535946|gb|EEF37605.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 435

 Score =  275 bits (704), Expect = 5e-72
 Identities = 138/202 (68%), Positives = 163/202 (80%), Gaps = 5/202 (2%)
 Frame = -1

Query: 592 EVAPALIAIHPVEKSVVVAIGSELRVFDLQEDCASSLVDD-SGRPLHMDSIRAISFGADG 416
           EVAPALI++HP + SV VA+GS+LRVFDLQ  C   LVD+ S  PLH DSIRAI + A+G
Sbjct: 18  EVAPALISVHPTQNSVAVAVGSDLRVFDLQGGCGVCLVDNNSSEPLHKDSIRAIRYSANG 77

Query: 415 RLFVSAGDDKLVKIWTTNPWHCIRTVLSEKRASALAISPDNLFVSFADKFGVVWVVST-E 239
           +LFVSAGDDKLV IW+T+ W C+ +V SEKR SA+AIS D L+V FADKFGVVWVV   E
Sbjct: 78  KLFVSAGDDKLVNIWSTDSWGCVSSVCSEKRVSAVAISNDGLYVCFADKFGVVWVVDLHE 137

Query: 238 VDDERK---DEASPIFAHYCSIITSLEFSPDGRFIVSADRDFKIRVTVFPKRPLSGAHEI 68
           ++  +     +ASP+ AHYCSIITSLEFSPDGRFIVSADRDFKIRVTVFPK+ L GAHEI
Sbjct: 138 LEGNQSLVNKKASPLLAHYCSIITSLEFSPDGRFIVSADRDFKIRVTVFPKKTLDGAHEI 197

Query: 67  QSFCLGHTEFVTCLSFVCTQEY 2
           QSFCLGHTEFV+CL+F+   +Y
Sbjct: 198 QSFCLGHTEFVSCLAFIWAADY 219


>ref|XP_003553467.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransferase subunit WDR4-like
           [Glycine max]
          Length = 417

 Score =  267 bits (682), Expect = 2e-69
 Identities = 135/201 (67%), Positives = 161/201 (80%), Gaps = 2/201 (0%)
 Frame = -1

Query: 601 SNKEVAPALIAIHPVEKSVVVAIGSELRVFDLQEDCASSLVDDSG-RPLHMDSIRAISFG 425
           ++ EVAPALIA+HP + SV VA+G  LRVFDL    A+SL DDS   PLH ++IRAI FG
Sbjct: 7   NDTEVAPALIAVHPDQSSVAVAVGPHLRVFDLLSGSAASLTDDSDCAPLHKNNIRAIRFG 66

Query: 424 ADGRLFVSAGDDKLVKIWTTNPWHCIRTVLSEKRASALAISPDNLFVSFADKFGVVWVVS 245
           A G+LFVSAGDDK VK+W+T  W CI TV SEKR +A+AIS D  FV FADKFGVVWVV 
Sbjct: 67  AKGKLFVSAGDDKTVKVWSTQSWRCITTVSSEKRVTAVAISNDGTFVCFADKFGVVWVV- 125

Query: 244 TEVDDERKDEA-SPIFAHYCSIITSLEFSPDGRFIVSADRDFKIRVTVFPKRPLSGAHEI 68
            +VD    D+  +P+ +HYCSIITSLEFSPDGRFI+SADRDFKIRVT FP++PL+GAH+I
Sbjct: 126 -DVDPPLHDKKPAPLLSHYCSIITSLEFSPDGRFILSADRDFKIRVTNFPQKPLNGAHQI 184

Query: 67  QSFCLGHTEFVTCLSFVCTQE 5
           QSFCLGHTEFV+CL+F+  QE
Sbjct: 185 QSFCLGHTEFVSCLAFIQAQE 205


>ref|NP_563675.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
           gi|13877931|gb|AAK44043.1|AF370228_1 unknown protein
           [Arabidopsis thaliana] gi|16323464|gb|AAL15226.1|
           unknown protein [Arabidopsis thaliana]
           gi|332189411|gb|AEE27532.1| transducin/WD-40
           repeat-containing protein [Arabidopsis thaliana]
          Length = 427

 Score =  266 bits (680), Expect = 3e-69
 Identities = 128/200 (64%), Positives = 160/200 (80%), Gaps = 4/200 (2%)
 Frame = -1

Query: 592 EVAPALIAIHPVEKSVVVAIGSELRVFDLQEDCASSLVDDSGRPLHMDSIRAISFGADGR 413
           EVAPALI++HP +KSV VA+GS+LR+FDL E+C  SLVD+S  P+  +SIRAI +   G+
Sbjct: 17  EVAPALISVHPSQKSVAVAVGSDLRIFDLIENCPVSLVDESDGPIRKESIRAIRYSTSGK 76

Query: 412 LFVSAGDDKLVKIWTTNPWHCIRTVLSEKRASALAISPDNLFVSFADKFGVVWVVSTEVD 233
           LFVSAGDDKLVKIW+ + W C+ TV SEKR SA+AIS D+  V +ADKFGVVWV+  +  
Sbjct: 77  LFVSAGDDKLVKIWSADSWRCLNTVCSEKRVSAVAISSDDSHVCYADKFGVVWVIELDGI 136

Query: 232 DERK----DEASPIFAHYCSIITSLEFSPDGRFIVSADRDFKIRVTVFPKRPLSGAHEIQ 65
           ++ K     + + + +HYCSIITSLEFSPDGR+I+SADRDFKIRVTVFPK+PL GAHEIQ
Sbjct: 137 NDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQ 196

Query: 64  SFCLGHTEFVTCLSFVCTQE 5
           SFCLGH+EF+TC +FV T E
Sbjct: 197 SFCLGHSEFITCTAFVSTPE 216