BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027017
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17483.3| unnamed protein product [Vitis vinifera]              152   2e-35
ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat...   152   2e-35
ref|XP_002522430.1| pentatricopeptide repeat-containing protein,...   152   4e-35
emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]   150   8e-35
ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   145   3e-33

>emb|CBI17483.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/109 (66%), Positives = 89/109 (81%)
 Frame = -2

Query: 328 ESGVCPNEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVR 149
           ES V PNE+TFA++IS CANLAR+ WGEQLH+ ++H+GL  SLSV N+IMTMY+KCG++ 
Sbjct: 318 ESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLT 377

Query: 148 SSSMVFNGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRMRGEGQKPNE 2
           SSS++F+ M RRDIVSW+TIIAGYSQ GH  EAF+  S MR EG KP E
Sbjct: 378 SSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTE 426



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/103 (38%), Positives = 58/103 (56%)
 Frame = -2

Query: 310 NEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVRSSSMVF 131
           + +TFA  + ACA+   + +G ++H+  +  G + S  VAN + TMY+KCG++     +F
Sbjct: 223 DSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLF 282

Query: 130 NGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRMRGEGQKPNE 2
             M  RD+VSWTTII    Q G  E A   + RMR     PNE
Sbjct: 283 EKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNE 325



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/100 (37%), Positives = 58/100 (58%)
 Frame = -2

Query: 328 ESGVCPNEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVR 149
           ESG+  + F  +    AC   + V +GE LH + +  GL  S+ V +A++ MY+K G++ 
Sbjct: 116 ESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIF 175

Query: 148 SSSMVFNGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRM 29
               VF+ M  R++VSWT II G  + G+ +EA  Y+S M
Sbjct: 176 EGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEM 215


>ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/109 (66%), Positives = 89/109 (81%)
 Frame = -2

Query: 328 ESGVCPNEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVR 149
           ES V PNE+TFA++IS CANLAR+ WGEQLH+ ++H+GL  SLSV N+IMTMY+KCG++ 
Sbjct: 311 ESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLT 370

Query: 148 SSSMVFNGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRMRGEGQKPNE 2
           SSS++F+ M RRDIVSW+TIIAGYSQ GH  EAF+  S MR EG KP E
Sbjct: 371 SSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTE 419



 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 42/106 (39%), Positives = 69/106 (65%)
 Frame = -2

Query: 322 GVCPNEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVRSS 143
           G  P EF  AS++SAC N+A +  G+QLH++V+ +GLE++  V +A++ MY KCG +  +
Sbjct: 414 GPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEA 473

Query: 142 SMVFNGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRMRGEGQKPN 5
           S +F+     DIVSWT +I GY++ G+  E  D + ++   G +P+
Sbjct: 474 SRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPD 519



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/103 (38%), Positives = 58/103 (56%)
 Frame = -2

Query: 310 NEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVRSSSMVF 131
           + +TFA  + ACA+   + +G ++H+  +  G + S  VAN + TMY+KCG++     +F
Sbjct: 216 DSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLF 275

Query: 130 NGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRMRGEGQKPNE 2
             M  RD+VSWTTII    Q G  E A   + RMR     PNE
Sbjct: 276 EKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNE 318



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/100 (37%), Positives = 58/100 (58%)
 Frame = -2

Query: 328 ESGVCPNEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVR 149
           ESG+  + F  +    AC   + V +GE LH + +  GL  S+ V +A++ MY+K G++ 
Sbjct: 109 ESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIF 168

Query: 148 SSSMVFNGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRM 29
               VF+ M  R++VSWT II G  + G+ +EA  Y+S M
Sbjct: 169 EGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEM 208


>ref|XP_002522430.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538315|gb|EEF39922.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 556

 Score =  152 bits (383), Expect = 4e-35
 Identities = 70/109 (64%), Positives = 89/109 (81%)
 Frame = -2

Query: 328 ESGVCPNEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVR 149
           E GV PN+FTFA++IS CANL +  WGEQLH H++ +GL   LSVAN+++T+YSKCG+++
Sbjct: 310 EIGVSPNDFTFAAVISGCANLGKTEWGEQLHGHMLCLGLMTFLSVANSVITLYSKCGQLK 369

Query: 148 SSSMVFNGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRMRGEGQKPNE 2
           S+SMVF  + RRD+VSW+TIIAGYSQ G  EEAF+Y SRMR EG KPNE
Sbjct: 370 SASMVFKELTRRDVVSWSTIIAGYSQGGCAEEAFEYLSRMRREGPKPNE 418



 Score =  104 bits (259), Expect = 9e-21
 Identities = 46/106 (43%), Positives = 71/106 (66%)
 Frame = -2

Query: 322 GVCPNEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVRSS 143
           G  PNE T AS++S C N+A +  G+QLH+H +HVGLE +  + +A++ MYSKCG ++ +
Sbjct: 413 GPKPNELTLASVLSVCGNMAILEQGKQLHAHALHVGLEQTAMIQSALINMYSKCGSIKEA 472

Query: 142 SMVFNGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRMRGEGQKPN 5
           S +F+     DIVSWT +I GY++ G  +EA D + ++   G KP+
Sbjct: 473 SKIFDEAENNDIVSWTAMINGYAEHGCRQEAIDLFEKIPRIGLKPD 518



 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/108 (41%), Positives = 62/108 (57%)
 Frame = -2

Query: 325 SGVCPNEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVRS 146
           S V  + +TFA  + ACANL  +  G Q+H   +   LE S  VAN + TMY+KCG++  
Sbjct: 210 SKVVCDSYTFAIALKACANLGALDHGRQIHCQALKRSLEASSFVANTLATMYNKCGKLDY 269

Query: 145 SSMVFNGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRMRGEGQKPNE 2
            S +F  M  R++VSWT II  Y+Q G  E A   + RM+  G  PN+
Sbjct: 270 GSRLFEKMTIRNVVSWTMIITTYTQSGQEENALRAFIRMQEIGVSPND 317



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/98 (28%), Positives = 51/98 (52%)
 Frame = -2

Query: 322 GVCPNEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVRSS 143
           G+  + F  +  +  C       +GE LH + +      S+ V +A++ MY K  +++  
Sbjct: 110 GLRMDPFILSLALKICGLSLNESYGESLHGYSVKSDFVDSVFVGSALVDMYMKFDKIQQG 169

Query: 142 SMVFNGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRM 29
             +F+ M  R++VSWT II G+   G+ +E   Y+S+M
Sbjct: 170 CQIFHAMPIRNVVSWTAIITGFVHAGYSKEGLVYFSQM 207


>emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  150 bits (380), Expect = 8e-35
 Identities = 71/109 (65%), Positives = 88/109 (80%)
 Frame = -2

Query: 328 ESGVCPNEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVR 149
           ES V PNE+TFA++IS CANLAR+ WGEQLH+ ++H+GL  SLSV N+IMTMY+KCG++ 
Sbjct: 311 ESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLT 370

Query: 148 SSSMVFNGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRMRGEGQKPNE 2
           SSS++F+ M RRDIVSW+TIIAGY Q GH  EAF+  S MR EG KP E
Sbjct: 371 SSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTE 419



 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 42/106 (39%), Positives = 69/106 (65%)
 Frame = -2

Query: 322 GVCPNEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVRSS 143
           G  P EF  AS++SAC N+A +  G+QLH++V+ +GLE++  V +A++ MY KCG +  +
Sbjct: 414 GPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEA 473

Query: 142 SMVFNGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRMRGEGQKPN 5
           S +F+     DIVSWT +I GY++ G+  E  D + ++   G +P+
Sbjct: 474 SRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPD 519



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/103 (38%), Positives = 58/103 (56%)
 Frame = -2

Query: 310 NEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVRSSSMVF 131
           + +TFA  + ACA+   + +G ++H+  +  G + S  VAN + TMY+KCG++     +F
Sbjct: 216 DSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLF 275

Query: 130 NGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRMRGEGQKPNE 2
             M  RD+VSWTTII    Q G  E A   + RMR     PNE
Sbjct: 276 EKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNE 318



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/100 (37%), Positives = 58/100 (58%)
 Frame = -2

Query: 328 ESGVCPNEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVR 149
           ESG+  + F  +    AC   + V +GE LH + +  GL  S+ V +A++ MY+K G++ 
Sbjct: 109 ESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIF 168

Query: 148 SSSMVFNGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRM 29
               VF+ M  R++VSWT II G  + G+ +EA  Y+S M
Sbjct: 169 EGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEM 208


>ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g47840-like [Cucumis
           sativus]
          Length = 712

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/108 (63%), Positives = 85/108 (78%)
 Frame = -2

Query: 325 SGVCPNEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVRS 146
           S V PNE+TF+++IS CAN AR+ WGEQLH+HV+ VG   +LSVAN+IMT+YSKCG + S
Sbjct: 312 SNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELAS 371

Query: 145 SSMVFNGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRMRGEGQKPNE 2
            S VF  M  RDI++W+TIIA YSQ G+ EEAF+Y SRMR EG KPNE
Sbjct: 372 VSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNE 419



 Score =  100 bits (249), Expect = 1e-19
 Identities = 43/106 (40%), Positives = 72/106 (67%)
 Frame = -2

Query: 322 GVCPNEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVRSS 143
           G  PNEF  AS++S C ++A +  G+QLH+HV+ VGLE +  V +A++ MY+KCG +  +
Sbjct: 414 GPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEA 473

Query: 142 SMVFNGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRMRGEGQKPN 5
           S +F    + DI+SWT +I+GY++ GH +EA + +  ++  G +P+
Sbjct: 474 SKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPD 519



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/103 (32%), Positives = 53/103 (51%)
 Frame = -2

Query: 310 NEFTFASIISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVRSSSMVF 131
           + + +A  + A A+   +  G  +H+  +  G + +  VAN++ TMY+KCG++      F
Sbjct: 216 DSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTF 275

Query: 130 NGMVRRDIVSWTTIIAGYSQDGHWEEAFDYYSRMRGEGQKPNE 2
             M   D+VSWTTI+  Y Q G  +     + RMR     PNE
Sbjct: 276 RKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNE 318



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/86 (32%), Positives = 43/86 (50%)
 Frame = -2

Query: 286 ISACANLARVYWGEQLHSHVIHVGLEYSLSVANAIMTMYSKCGRVRSSSMVFNGMVRRDI 107
           +  C       +G  LH   +  GL  S+ V +A++ MY K G +  S  VF+ M  R+ 
Sbjct: 123 LKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNA 182

Query: 106 VSWTTIIAGYSQDGHWEEAFDYYSRM 29
           V+WT +I G  + G+ E    Y+S M
Sbjct: 183 VTWTAVITGLVRAGYSEAGLAYFSGM 208