BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027011
         (986 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containi...   434   e-119
ref|XP_002515341.1| pentatricopeptide repeat-containing protein,...   403   e-110
emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera]   392   e-107
ref|XP_002330760.1| predicted protein [Populus trichocarpa] gi|2...   386   e-105
emb|CBI20759.3| unnamed protein product [Vitis vinifera]              383   e-104

>ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containing protein At5g10690-like
            [Vitis vinifera]
          Length = 609

 Score =  434 bits (1116), Expect = e-119
 Identities = 217/318 (68%), Positives = 262/318 (82%), Gaps = 1/318 (0%)
 Frame = +1

Query: 22   LLPDAVTYTTLLKGFSDANNFISVQKLVIEMKSSENLIIDRIAYTAIVDALLICGSTKGA 201
            L PDA+TYTTLLKGF  A + +SVQK+V+EMKSS NL +DR AYTAIVDALL CGS+KGA
Sbjct: 273  LFPDAITYTTLLKGFGHAKDLLSVQKIVMEMKSSNNLFVDRTAYTAIVDALLNCGSSKGA 332

Query: 202  LCIFGEILKLTGVHPYLRPKPHLYLSMMRTFALKGDYHMVKRFHARMWPDTSGTISPALQ 381
            LC+FGEI+K  G +  LRPKPHLY+SMM   A +GDY++VK  H RM PD++GTISPA+Q
Sbjct: 333  LCMFGEIIKRAGQNFNLRPKPHLYISMMSALAARGDYNLVKSLHKRMRPDSAGTISPAVQ 392

Query: 382  VESDELLMEAAINDGQVDVAREVLSNVNTKWEEISWTSRGSMAAVRVEALSGFS-TMFSP 558
            +E+D+LLMEAA+NDGQVD A   LSN+ T+W+ I W SRG M AVR+EAL GF+ +MFSP
Sbjct: 393  IEADQLLMEAALNDGQVDAATHHLSNIITRWKGICWRSRGGMVAVRLEALLGFTRSMFSP 452

Query: 559  YLLPQVILDGPIKNIMMPFDEAQPLHANMYLEKVVMRFFRDAVVPVIDDWGSCVGLVHRE 738
            YLLPQV    PI+NIMMPF+EA+PL A + L++VVMRF++D+VVPVIDDWGSCVGL+HRE
Sbjct: 453  YLLPQVSPADPIENIMMPFEEARPLLATLDLKRVVMRFYKDSVVPVIDDWGSCVGLLHRE 512

Query: 739  DCKQLKTSLSKIMRGPPPCVTASTSIGRVIDLLLEKRYKMIVVVKPNNLYEIGYISSLRA 918
            DC++L   +S +MR PPPCVT +TSIGRV DL+LEKRYKM+VVVK +NLY   Y SSLRA
Sbjct: 513  DCRELDAPVSTMMRSPPPCVTTTTSIGRVADLILEKRYKMVVVVKYSNLYGSSYSSSLRA 572

Query: 919  VGVFTPEQLFKLATFASE 972
            VGVFT EQLFKLA  ASE
Sbjct: 573  VGVFTSEQLFKLA-IASE 589


>ref|XP_002515341.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545285|gb|EEF46790.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 600

 Score =  403 bits (1036), Expect = e-110
 Identities = 200/318 (62%), Positives = 247/318 (77%), Gaps = 1/318 (0%)
 Frame = +1

Query: 22   LLPDAVTYTTLLKGFSDANNFISVQKLVIEMKSSENLIIDRIAYTAIVDALLICGSTKGA 201
            L PD VTYTTLLKGF +A +  SV+ +V+EMK   NL IDR  +TA+VDALL  GS KGA
Sbjct: 266  LYPDVVTYTTLLKGFGNAKDLGSVKMIVLEMKLYHNLFIDRTGFTAMVDALLNSGSIKGA 325

Query: 202  LCIFGEILKLTGVHPYLRPKPHLYLSMMRTFALKGDYHMVKRFHARMWPDTSGTISPALQ 381
            LCIFGEI+K  GV+P LRPKPHLYLSMMR FA++GDY MVK  H R+WPD++GTISPA+Q
Sbjct: 326  LCIFGEIIKRAGVNPDLRPKPHLYLSMMRAFAVQGDYSMVKNLHKRLWPDSTGTISPAIQ 385

Query: 382  VESDELLMEAAINDGQVDVAREVLSNVNTKWEEISWTSRGSMAAVRVEALSGF-STMFSP 558
             E+D LLMEAA+N GQVD A E L  +  +W  ISWT+RG M AVR+EAL GF  ++FSP
Sbjct: 386  QEADHLLMEAALNGGQVDAALENLRKIIPRWNGISWTNRGGMVAVRIEALLGFRKSIFSP 445

Query: 559  YLLPQVILDGPIKNIMMPFDEAQPLHANMYLEKVVMRFFRDAVVPVIDDWGSCVGLVHRE 738
            YLLPQ+    PI+ IM P +EAQPL   + L+KVVMRFFRD VVP++DDWG+C+GL+HRE
Sbjct: 446  YLLPQISSSEPIETIMTPLEEAQPLLGTLELKKVVMRFFRDEVVPIMDDWGNCIGLLHRE 505

Query: 739  DCKQLKTSLSKIMRGPPPCVTASTSIGRVIDLLLEKRYKMIVVVKPNNLYEIGYISSLRA 918
            DC +L  +L+ +MR PPPCVT  TSIG V+DL+L+K+Y+M+VV+K +NL  I Y SS RA
Sbjct: 506  DCTELNATLATMMRSPPPCVTTMTSIGHVVDLILDKKYRMVVVIKYSNLDSITY-SSSRA 564

Query: 919  VGVFTPEQLFKLATFASE 972
            VGVFT E+L+KLA   SE
Sbjct: 565  VGVFTAEKLYKLAKPVSE 582


>emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera]
          Length = 1120

 Score =  392 bits (1007), Expect = e-107
 Identities = 204/318 (64%), Positives = 245/318 (77%), Gaps = 1/318 (0%)
 Frame = +1

Query: 22   LLPDAVTYTTLLKGFSDANNFISVQKLVIEMKSSENLIIDRIAYTAIVDALLICGSTKGA 201
            L PDA+TYTTLLKGF  A + +SVQK+V+EMKSS NL +DR AYTAIVDALL CGS+KGA
Sbjct: 273  LFPDAITYTTLLKGFGHAKDLLSVQKIVMEMKSSNNLFVDRTAYTAIVDALLNCGSSKGA 332

Query: 202  LCIFGEILKLTGVHPYLRPKPHLYLSMMRTFALKGDYHMVKRFHARMWPDTSGTISPALQ 381
            LCIFGEI+K  G +  LRPKPHLY+SMM   A +GDY++VK  H RM PD++GTISPA+Q
Sbjct: 333  LCIFGEIIKRAGQNFNLRPKPHLYISMMSALAARGDYNLVKSLHKRMRPDSAGTISPAVQ 392

Query: 382  VESDELLMEAAINDGQVDVAREVLSNVNTKWEEISWTSRGSMAAVRVEALSGFS-TMFSP 558
            +E+D+LLMEAA+NDGQV                          AVR+EAL GF+ +MFSP
Sbjct: 393  IEADQLLMEAALNDGQV--------------------------AVRLEALLGFTRSMFSP 426

Query: 559  YLLPQVILDGPIKNIMMPFDEAQPLHANMYLEKVVMRFFRDAVVPVIDDWGSCVGLVHRE 738
            YLLPQV    PI+NIMMPF+EA+PL A + L++VVMRF++D+VVPVIDDWGSCVGL+H E
Sbjct: 427  YLLPQVSPADPIENIMMPFEEARPLLATLDLKRVVMRFYKDSVVPVIDDWGSCVGLLHHE 486

Query: 739  DCKQLKTSLSKIMRGPPPCVTASTSIGRVIDLLLEKRYKMIVVVKPNNLYEIGYISSLRA 918
            DC++L   +S +MR PPPCVT +TSIGRV DL+LEKRYKM+VVVK +NLY   Y SSLRA
Sbjct: 487  DCRELDAPVSTMMRSPPPCVTTTTSIGRVADLILEKRYKMVVVVKYSNLYGSSYSSSLRA 546

Query: 919  VGVFTPEQLFKLATFASE 972
            VGVFT EQLFKLA  ASE
Sbjct: 547  VGVFTSEQLFKLA-MASE 563


>ref|XP_002330760.1| predicted protein [Populus trichocarpa] gi|222872562|gb|EEF09693.1|
            predicted protein [Populus trichocarpa]
          Length = 607

 Score =  386 bits (992), Expect = e-105
 Identities = 194/319 (60%), Positives = 240/319 (75%), Gaps = 8/319 (2%)
 Frame = +1

Query: 22   LLPDAVTYTTLLKGFSDANNFISVQKLVIEMKSSENLIIDRIAYTAIVDALLICGSTKGA 201
            L PD VTYTTLL+GF  A + +SV K+V EMK   NL+IDR A+TA+VDALL CGS  GA
Sbjct: 265  LYPDVVTYTTLLQGFGGAKDLLSVLKIVYEMKMHRNLVIDRTAFTAMVDALLNCGSMNGA 324

Query: 202  LCIFGEILKLTGVHPYLRPKPHLYLSMMRTFALKGDYHMVKRFHARMWPDTSGTISPALQ 381
            +C+FGEI+K  GV+P LRPKPHLYLS+MR FA +GDY+MVK  H R+WPD+SG IS ALQ
Sbjct: 325  VCVFGEIIKRAGVNPKLRPKPHLYLSLMRAFASQGDYNMVKNLHKRLWPDSSGAISLALQ 384

Query: 382  VESDELLMEAAINDGQVDVAREVLSNVNTKWEEISWT-------SRGSMAAVRVEALSGF 540
             E+D LLMEAA+NDGQV+VA E L+NV  KW+ I WT       + G + A+R+E L GF
Sbjct: 385  EEADHLLMEAALNDGQVNVALENLTNVVLKWKRIPWTIVPNPQFTCGMLVAMRIEVLLGF 444

Query: 541  -STMFSPYLLPQVILDGPIKNIMMPFDEAQPLHANMYLEKVVMRFFRDAVVPVIDDWGSC 717
             +++FSPYLLPQV    PI++IMMP   A+PL   ++L+KVVMRFF D VVP++DDWGSC
Sbjct: 445  TNSIFSPYLLPQVSPSEPIESIMMPLKAAKPLLGTLHLKKVVMRFFWDQVVPIVDDWGSC 504

Query: 718  VGLVHREDCKQLKTSLSKIMRGPPPCVTASTSIGRVIDLLLEKRYKMIVVVKPNNLYEIG 897
            VGL+HREDC +L   L  +MR PPPCVT +TSIG V+DL+LEK Y+M+VVVK +NL    
Sbjct: 505  VGLLHREDCTELNAPLMTMMRSPPPCVTTTTSIGHVVDLILEKMYRMVVVVKYSNLNSST 564

Query: 898  YISSLRAVGVFTPEQLFKL 954
              S  + VGVFT EQLFKL
Sbjct: 565  NSSGSKTVGVFTTEQLFKL 583


>emb|CBI20759.3| unnamed protein product [Vitis vinifera]
          Length = 570

 Score =  383 bits (984), Expect = e-104
 Identities = 186/277 (67%), Positives = 229/277 (82%), Gaps = 1/277 (0%)
 Frame = +1

Query: 22   LLPDAVTYTTLLKGFSDANNFISVQKLVIEMKSSENLIIDRIAYTAIVDALLICGSTKGA 201
            L PDA+TYTTLLKGF  A + +SVQK+V+EMKSS NL +DR AYTAIVDALL CGS+KGA
Sbjct: 290  LFPDAITYTTLLKGFGHAKDLLSVQKIVMEMKSSNNLFVDRTAYTAIVDALLNCGSSKGA 349

Query: 202  LCIFGEILKLTGVHPYLRPKPHLYLSMMRTFALKGDYHMVKRFHARMWPDTSGTISPALQ 381
            LC+FGEI+K  G +  LRPKPHLY+SMM   A +GDY++VK  H RM PD++GTISPA+Q
Sbjct: 350  LCMFGEIIKRAGQNFNLRPKPHLYISMMSALAARGDYNLVKSLHKRMRPDSAGTISPAVQ 409

Query: 382  VESDELLMEAAINDGQVDVAREVLSNVNTKWEEISWTSRGSMAAVRVEALSGFS-TMFSP 558
            +E+D+LLMEAA+NDGQVD A   LSN+ T+W+ I W SRG M AVR+EAL GF+ +MFSP
Sbjct: 410  IEADQLLMEAALNDGQVDAATHHLSNIITRWKGICWRSRGGMVAVRLEALLGFTRSMFSP 469

Query: 559  YLLPQVILDGPIKNIMMPFDEAQPLHANMYLEKVVMRFFRDAVVPVIDDWGSCVGLVHRE 738
            YLLPQV    PI+NIMMPF+EA+PL A + L++VVMRF++D+VVPVIDDWGSCVGL+HRE
Sbjct: 470  YLLPQVSPADPIENIMMPFEEARPLLATLDLKRVVMRFYKDSVVPVIDDWGSCVGLLHRE 529

Query: 739  DCKQLKTSLSKIMRGPPPCVTASTSIGRVIDLLLEKR 849
            DC++L   +S +MR PPPCVT +TSIGRV DL+LEKR
Sbjct: 530  DCRELDAPVSTMMRSPPPCVTTTTSIGRVADLILEKR 566