BLASTX nr result

ID: Coptis23_contig00027003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027003
         (1487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284915.2| PREDICTED: branched-chain-amino-acid aminotr...   298   3e-78
emb|CBI36739.3| unnamed protein product [Vitis vinifera]              297   4e-78
ref|XP_002512340.1| conserved hypothetical protein [Ricinus comm...   286   1e-74
ref|XP_003626320.1| Protein FAM86A [Medicago truncatula] gi|3555...   281   2e-73
ref|NP_198092.1| S-adenosyl-L-methionine-dependent methyltransfe...   261   3e-67

>ref|XP_002284915.2| PREDICTED: branched-chain-amino-acid aminotransferase-like protein
           2 [Vitis vinifera]
          Length = 960

 Score =  298 bits (762), Expect = 3e-78
 Identities = 164/306 (53%), Positives = 210/306 (68%), Gaps = 3/306 (0%)
 Frame = +1

Query: 76  YLISAFFAMEPTPFLISLSKECGGGSITKPVQTLILNQCINKAVSRENGPSGLYVKNFLK 255
           +L+SAF AMEPT  LISL++ CGGG IT+ VQ  I + CI+K V + + P   Y KNFLK
Sbjct: 15  HLLSAFLAMEPTHCLISLARVCGGGLITEGVQRFIWDNCISK-VEKSHVP---YSKNFLK 70

Query: 256 KVIVYVEESSDEVLDDLYEQFAYYITSFKDDILAKGNTRVCKTFSFLFPDDCFELSSCPK 435
           K+I  +E +  ++LD+LYEQ+A Y+   KDD L K N+RV K  SFLFP  CF + SCPK
Sbjct: 71  KLINEIESAHGDILDELYEQYASYMILLKDDRLVKENSRVLKCISFLFPPGCFGVPSCPK 130

Query: 436 SMKLEVPLRCSLNMLDGDTGCWIWPSSFYLSEFVLSYPEIFTGKSXXXXXXXXXXXXISL 615
           SM+L VPL CSLNML+GDTGC IWPSS +LSEF+LS+PEIF+ KS            I L
Sbjct: 131 SMQLAVPLHCSLNMLEGDTGCSIWPSSLFLSEFILSHPEIFSNKSCFEVGSGVGLVGICL 190

Query: 616 AKVKATKVILTDGDMSTLANLKLNLDLNHQLGAESEVAQGTDRDKNIVKGEYLSWEFASE 795
           A VKA+KVIL++G +S+LAN+KLNL+LN QL    +    T++D N+VK  +L WE A E
Sbjct: 191 AHVKASKVILSEGGLSSLANMKLNLELN-QLNNRMDDPGTTNQDPNLVKCIFLPWESAEE 249

Query: 796 SVLQGFTSDIVLGADVIYDPLCFPHLVRVLSILLKPRK--TPLHQGNKGCVDL-PTHEGF 966
           S LQ F  DI+LGADVIY+PLC PHL+RVL+ LL   +  +PL Q N  CV+  P     
Sbjct: 250 SELQNFMPDIILGADVIYNPLCLPHLIRVLATLLNQTRSSSPLQQDN--CVEFSPDSRCI 307

Query: 967 VDKRID 984
           +D R +
Sbjct: 308 MDARAE 313



 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 38/61 (62%), Positives = 50/61 (81%)
 Frame = +2

Query: 1175 PMAYITTVIRNVDTYRYFLNVASQADLSVVDITENQKPLNLLPYMQSYDRSNIRLLTVSV 1354
            P+AYI +VIRN++T+ YFL +A +A+L V D+TE  KP +LLPYMQSYDRS+IRL T+S 
Sbjct: 339  PVAYIASVIRNIETFNYFLALAEEANLDVKDLTEQCKPFDLLPYMQSYDRSSIRLFTLSY 398

Query: 1355 L 1357
            L
Sbjct: 399  L 399


>emb|CBI36739.3| unnamed protein product [Vitis vinifera]
          Length = 975

 Score =  297 bits (761), Expect = 4e-78
 Identities = 162/299 (54%), Positives = 206/299 (68%), Gaps = 2/299 (0%)
 Frame = +1

Query: 76  YLISAFFAMEPTPFLISLSKECGGGSITKPVQTLILNQCINKAVSRENGPSGLYVKNFLK 255
           +L+SAF AMEPT  LISL++ CGGG IT+ VQ  I + CI+K V + + P   Y KNFLK
Sbjct: 15  HLLSAFLAMEPTHCLISLARVCGGGLITEGVQRFIWDNCISK-VEKSHVP---YSKNFLK 70

Query: 256 KVIVYVEESSDEVLDDLYEQFAYYITSFKDDILAKGNTRVCKTFSFLFPDDCFELSSCPK 435
           K+I  +E +  ++LD+LYEQ+A Y+   KDD L K N+RV K  SFLFP  CF + SCPK
Sbjct: 71  KLINEIESAHGDILDELYEQYASYMILLKDDRLVKENSRVLKCISFLFPPGCFGVPSCPK 130

Query: 436 SMKLEVPLRCSLNMLDGDTGCWIWPSSFYLSEFVLSYPEIFTGKSXXXXXXXXXXXXISL 615
           SM+L VPL CSLNML+GDTGC IWPSS +LSEF+LS+PEIF+ KS            I L
Sbjct: 131 SMQLAVPLHCSLNMLEGDTGCSIWPSSLFLSEFILSHPEIFSNKSCFEVGSGVGLVGICL 190

Query: 616 AKVKATKVILTDGDMSTLANLKLNLDLNHQLGAESEVAQGTDRDKNIVKGEYLSWEFASE 795
           A VKA+KVIL++G +S+LAN+KLNL+LN QL    +    T++D N+VK  +L WE A E
Sbjct: 191 AHVKASKVILSEGGLSSLANMKLNLELN-QLNNRMDDPGTTNQDPNLVKCIFLPWESAEE 249

Query: 796 SVLQGFTSDIVLGADVIYDPLCFPHLVRVLSILLKPRK--TPLHQGNKGCVDLPTHEGF 966
           S LQ F  DI+LGADVIY+PLC PHL+RVL+ LL   +  +PL Q N  CV+      F
Sbjct: 250 SELQNFMPDIILGADVIYNPLCLPHLIRVLATLLNQTRSSSPLQQDN--CVEFSPDSRF 306



 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 39/62 (62%), Positives = 51/62 (82%)
 Frame = +2

Query: 1175 PMAYITTVIRNVDTYRYFLNVASQADLSVVDITENQKPLNLLPYMQSYDRSNIRLLTVSV 1354
            P+AYI +VIRN++T+ YFL +A +A+L V D+TE  KP +LLPYMQSYDRS+IRL T+S 
Sbjct: 307  PVAYIASVIRNIETFNYFLALAEEANLDVKDLTEQCKPFDLLPYMQSYDRSSIRLFTLSY 366

Query: 1355 LH 1360
            LH
Sbjct: 367  LH 368


>ref|XP_002512340.1| conserved hypothetical protein [Ricinus communis]
           gi|223548301|gb|EEF49792.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 411

 Score =  286 bits (732), Expect = 1e-74
 Identities = 153/296 (51%), Positives = 197/296 (66%), Gaps = 8/296 (2%)
 Frame = +1

Query: 76  YLISAFFAMEPTPFLISLSKECGGGSITKPVQTLILNQCINKAVSRENGPSGLYVKNFLK 255
           +LISAF AM+PT  LISL++ CGGG +T+ VQ  I   CI+K   + N P   Y+KNF+K
Sbjct: 15  HLISAFLAMDPTGTLISLARACGGGLVTETVQRFIWEFCISKTTDKGNTP---YLKNFVK 71

Query: 256 KVIVYVEESSDE-VLDDLYEQFAYYITSFKDDILAKGNTRVCKTFSFLFPDDCFELSSCP 432
           K+I  +E S    VLD+LYEQ+ YY+TS KDDI      RVCK  SFLFPD C     CP
Sbjct: 72  KLICEIESSHGTIVLDELYEQYGYYVTSLKDDI---SGARVCKCISFLFPDGCSSSPICP 128

Query: 433 KSMKLEVPLRCSLNMLDGDTGCWIWPSSFYLSEFVLSYPEIFTGKSXXXXXXXXXXXXIS 612
           KS KL VPL CSLNML+GDTGC +WPSS YLSEFVLS+P+IF+ K+            + 
Sbjct: 129 KSRKLVVPLHCSLNMLEGDTGCSVWPSSLYLSEFVLSFPDIFSNKTCFEVGSGVGLVGVC 188

Query: 613 LAKVKATKVILTDGDMSTLANLKLNLDLNHQLGAESEVAQGTDRDKNIVKGE-------Y 771
           L+ VKA+KVIL+DGD+STLAN+K NL+LN +   ++ + + T +D+N VK E       +
Sbjct: 189 LSHVKASKVILSDGDLSTLANMKFNLELN-ESSVDTGMPERTMQDQNRVKAEMDKVKCIH 247

Query: 772 LSWEFASESVLQGFTSDIVLGADVIYDPLCFPHLVRVLSILLKPRKTPLHQGNKGC 939
           L WE A+ + LQ F  DIVLGAD+IYDP C P+LV+VL+ILLK  +       + C
Sbjct: 248 LPWESATRNELQEFMPDIVLGADIIYDPSCLPYLVQVLAILLKQTRAHSQMPEENC 303



 Score = 81.6 bits (200), Expect = 5e-13
 Identities = 41/74 (55%), Positives = 56/74 (75%)
 Frame = +2

Query: 1130 EGRSAMSPIGISKKKPMAYITTVIRNVDTYRYFLNVASQADLSVVDITENQKPLNLLPYM 1309
            +G S  +P    +K P+AYI +VIRN+DT+  FL +A QA+LSV DITE ++P +LLPYM
Sbjct: 340  DGSSDAAP----RKGPVAYIASVIRNIDTFNCFLGLAEQANLSVRDITEKRRPFDLLPYM 395

Query: 1310 QSYDRSNIRLLTVS 1351
            QSY+RS+IRL  V+
Sbjct: 396  QSYNRSSIRLFCVA 409


>ref|XP_003626320.1| Protein FAM86A [Medicago truncatula] gi|355501335|gb|AES82538.1|
           Protein FAM86A [Medicago truncatula]
          Length = 397

 Score =  281 bits (720), Expect = 2e-73
 Identities = 151/280 (53%), Positives = 189/280 (67%), Gaps = 3/280 (1%)
 Frame = +1

Query: 76  YLISAFFAMEPTPFLISLSKECGGGSITKPVQTLILNQCINKAVSRENGPSGLY---VKN 246
           YL+SA  AMEP+  LIS +K CG GSIT+ VQ  IL+ C++        PS  Y   +KN
Sbjct: 12  YLLSAILAMEPSYCLISHAKACGEGSITEQVQQFILDHCLST-------PSDFYAPYLKN 64

Query: 247 FLKKVIVYVEESSDEVLDDLYEQFAYYITSFKDDILAKGNTRVCKTFSFLFPDDCFELSS 426
           FLKK+I  VE     VLD  Y+ +A YITSFKDD L K ++R+CK  SFLFPD C EL +
Sbjct: 65  FLKKLITQVESDHGSVLDKFYQLYAQYITSFKDDSLDKRDSRICKRISFLFPDGCSELQT 124

Query: 427 CPKSMKLEVPLRCSLNMLDGDTGCWIWPSSFYLSEFVLSYPEIFTGKSXXXXXXXXXXXX 606
           C  S  L  PL+CS+NML+GDTGC IWPSS +LSE +LS+PE+F+ K             
Sbjct: 125 CSHSSVLNFPLQCSINMLEGDTGCSIWPSSLFLSELILSHPELFSNKVCFEIGSGVGLVG 184

Query: 607 ISLAKVKATKVILTDGDMSTLANLKLNLDLNHQLGAESEVAQGTDRDKNIVKGEYLSWEF 786
           + LA VKA+KVIL+DGD+STLAN+K NL+LN+ L  E+  AQ  + D + VK  YL WE 
Sbjct: 185 LCLAHVKASKVILSDGDLSTLANMKFNLELNN-LNVETGTAQ-RNEDTSAVKCMYLPWES 242

Query: 787 ASESVLQGFTSDIVLGADVIYDPLCFPHLVRVLSILLKPR 906
           ASES LQ    D++LGADVIYDP+C PHLVRV++ILL  R
Sbjct: 243 ASESQLQDIIPDVILGADVIYDPVCLPHLVRVITILLNQR 282



 Score = 74.3 bits (181), Expect = 8e-11
 Identities = 33/65 (50%), Positives = 50/65 (76%)
 Frame = +2

Query: 1157 GISKKKPMAYITTVIRNVDTYRYFLNVASQADLSVVDITENQKPLNLLPYMQSYDRSNIR 1336
            G  K+ P+AYI  VIRN++T+ YFL +  QA+L + D+TE  KP+ LLPYMQSY++++I+
Sbjct: 325  GQPKEAPVAYIACVIRNIETFNYFLTLGDQANLHIEDLTELLKPMVLLPYMQSYNQADIK 384

Query: 1337 LLTVS 1351
            LL ++
Sbjct: 385  LLCIT 389


>ref|NP_198092.1| S-adenosyl-L-methionine-dependent methyltransferase
           domain-containing protein [Arabidopsis thaliana]
           gi|29029094|gb|AAO64926.1| At5g27400 [Arabidopsis
           thaliana] gi|110743031|dbj|BAE99408.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332006299|gb|AED93682.1|
           S-adenosyl-L-methionine-dependent methyltransferase
           domain-containing protein [Arabidopsis thaliana]
          Length = 369

 Score =  261 bits (667), Expect = 3e-67
 Identities = 142/284 (50%), Positives = 184/284 (64%)
 Frame = +1

Query: 79  LISAFFAMEPTPFLISLSKECGGGSITKPVQTLILNQCINKAVSRENGPSGLYVKNFLKK 258
           ++SAF A+EP   +I+L++ C GGSIT+  Q      C+  A    NG +G Y K  LKK
Sbjct: 14  VLSAFLAIEPVDSVITLARGCTGGSITENAQRFFWEICVEAAA---NG-NGSYAKKLLKK 69

Query: 259 VIVYVEESSDEVLDDLYEQFAYYITSFKDDILAKGNTRVCKTFSFLFPDDCFELSSCPKS 438
           +I  VE  + EVLD++YE++A Y+ + K+DIL K N R+ K  SFLFP+  ++  SCP+S
Sbjct: 70  LINEVELENGEVLDEVYEEYALYMLTSKEDILVKENIRITKFISFLFPEGSYKHPSCPRS 129

Query: 439 MKLEVPLRCSLNMLDGDTGCWIWPSSFYLSEFVLSYPEIFTGKSXXXXXXXXXXXXISLA 618
            KL +PL CSLNML+GDTGC IWPSS +LSEFVLS+PE+F  K+            I LA
Sbjct: 130 RKLVIPLHCSLNMLEGDTGCSIWPSSLFLSEFVLSFPELFANKACFEVGSGVGMVGICLA 189

Query: 619 KVKATKVILTDGDMSTLANLKLNLDLNHQLGAESEVAQGTDRDKNIVKGEYLSWEFASES 798
            VKA +VILTDGD+ TL+N+KLNL+ NH    +  + Q  +     VK  +L WE ASES
Sbjct: 190 HVKAKEVILTDGDLLTLSNMKLNLERNHLNYDDEFLKQPGEAQSTRVKCTHLPWETASES 249

Query: 799 VLQGFTSDIVLGADVIYDPLCFPHLVRVLSILLKPRKTPLHQGN 930
            L  +  DIVLGADVIYDP C PHL+RVL  LL   K P  +GN
Sbjct: 250 ELSQYRPDIVLGADVIYDPSCLPHLLRVLVALL---KNPPKRGN 290



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
 Frame = +2

Query: 1178 MAYITTVIRNVDTYRYFLNVASQADLSVVDITENQKP-LNLLPYMQSYDRSNIRLLTVS 1351
            +AYI +VIRNVDT+   L +A Q DLS+ D+T    P   LLPYM SYDRS +RL ++S
Sbjct: 309  VAYIASVIRNVDTFNVCLTLADQMDLSITDVTAELTPRFELLPYMHSYDRSTVRLFSIS 367


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