BLASTX nr result
ID: Coptis23_contig00027002
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00027002 (250 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002320134.1| predicted protein [Populus trichocarpa] gi|2... 76 2e-12 ref|XP_002301358.1| predicted protein [Populus trichocarpa] gi|2... 76 3e-12 emb|CBI22698.3| unnamed protein product [Vitis vinifera] 66 3e-09 ref|XP_002272091.1| PREDICTED: U-box domain-containing protein 3... 66 3e-09 ref|XP_002274993.2| PREDICTED: U-box domain-containing protein 3... 65 6e-09 >ref|XP_002320134.1| predicted protein [Populus trichocarpa] gi|222860907|gb|EEE98449.1| predicted protein [Populus trichocarpa] Length = 810 Score = 76.3 bits (186), Expect = 2e-12 Identities = 41/83 (49%), Positives = 54/83 (65%) Frame = -2 Query: 249 TEKMTTLKSKKAIFVSQQADLSCHIWFVCQGCLIQTRKGSLDGTEIRVTETPLESSPLTS 70 ++ M +KSKKA+ V QA SCHIWF+C+G LIQTRKG+LDGT+ V + + SP T Sbjct: 145 SKNMMDIKSKKAVSVCLQAPASCHIWFICKGHLIQTRKGALDGTDTDVRPSSQQKSPNT- 203 Query: 69 LIAENPQTEHIRSRSIAEGQIDH 1 E Q+ +RS+SI GQ H Sbjct: 204 ---EAGQSNIMRSQSILFGQHHH 223 >ref|XP_002301358.1| predicted protein [Populus trichocarpa] gi|222843084|gb|EEE80631.1| predicted protein [Populus trichocarpa] Length = 809 Score = 75.9 bits (185), Expect = 3e-12 Identities = 41/80 (51%), Positives = 53/80 (66%) Frame = -2 Query: 249 TEKMTTLKSKKAIFVSQQADLSCHIWFVCQGCLIQTRKGSLDGTEIRVTETPLESSPLTS 70 ++ M +KSKKAI V QA SCHIWF+C+G LI TR+G+LDGT V + ++SP T Sbjct: 142 SKNMMDIKSKKAISVCLQAPASCHIWFICKGHLIHTREGALDGTGTDVGSSSQQTSPHT- 200 Query: 69 LIAENPQTEHIRSRSIAEGQ 10 E Q H+RS+SIA GQ Sbjct: 201 ---EAGQLSHMRSQSIALGQ 217 >emb|CBI22698.3| unnamed protein product [Vitis vinifera] Length = 840 Score = 65.9 bits (159), Expect = 3e-09 Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 3/83 (3%) Frame = -2 Query: 249 TEKMTTLKSKKAIFVSQQADLSCHIWFVCQGCLIQTRKGSLDGTEIRVTETPLESSPLTS 70 ++KM LKSKKAIFV QQA LSCHIWF C+G LI TR GS R ET +E SP Sbjct: 141 SKKMAELKSKKAIFVCQQAPLSCHIWFACKGYLIYTR-GS------RQVETEIEVSPPLL 193 Query: 69 LI---AENPQTEHIRSRSIAEGQ 10 L+ E+ Q+ ++ S SI Q Sbjct: 194 LLNKNVESKQSANLISESITYKQ 216 >ref|XP_002272091.1| PREDICTED: U-box domain-containing protein 33-like [Vitis vinifera] Length = 823 Score = 65.9 bits (159), Expect = 3e-09 Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 3/83 (3%) Frame = -2 Query: 249 TEKMTTLKSKKAIFVSQQADLSCHIWFVCQGCLIQTRKGSLDGTEIRVTETPLESSPLTS 70 ++KM LKSKKAIFV QQA LSCHIWF C+G LI TR GS R ET +E SP Sbjct: 141 SKKMAELKSKKAIFVCQQAPLSCHIWFACKGYLIYTR-GS------RQVETEIEVSPPLL 193 Query: 69 LI---AENPQTEHIRSRSIAEGQ 10 L+ E+ Q+ ++ S SI Q Sbjct: 194 LLNKNVESKQSANLISESITYKQ 216 >ref|XP_002274993.2| PREDICTED: U-box domain-containing protein 33-like [Vitis vinifera] gi|297745303|emb|CBI40383.3| unnamed protein product [Vitis vinifera] Length = 881 Score = 65.1 bits (157), Expect = 6e-09 Identities = 34/80 (42%), Positives = 49/80 (61%) Frame = -2 Query: 249 TEKMTTLKSKKAIFVSQQADLSCHIWFVCQGCLIQTRKGSLDGTEIRVTETPLESSPLTS 70 + +M KSKKA +V +A L CHIWFVC+G LI TR+GSL+G +I + P + + + Sbjct: 170 SRRMLEPKSKKAAYVRDKAPLFCHIWFVCRGHLIYTREGSLNGADIELRTPPSQQASPNN 229 Query: 69 LIAENPQTEHIRSRSIAEGQ 10 E Q+ RS S++ GQ Sbjct: 230 ---ETGQSNTFRSMSVSLGQ 246