BLASTX nr result

ID: Coptis23_contig00027002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027002
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320134.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_002301358.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
emb|CBI22698.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002272091.1| PREDICTED: U-box domain-containing protein 3...    66   3e-09
ref|XP_002274993.2| PREDICTED: U-box domain-containing protein 3...    65   6e-09

>ref|XP_002320134.1| predicted protein [Populus trichocarpa] gi|222860907|gb|EEE98449.1|
           predicted protein [Populus trichocarpa]
          Length = 810

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 41/83 (49%), Positives = 54/83 (65%)
 Frame = -2

Query: 249 TEKMTTLKSKKAIFVSQQADLSCHIWFVCQGCLIQTRKGSLDGTEIRVTETPLESSPLTS 70
           ++ M  +KSKKA+ V  QA  SCHIWF+C+G LIQTRKG+LDGT+  V  +  + SP T 
Sbjct: 145 SKNMMDIKSKKAVSVCLQAPASCHIWFICKGHLIQTRKGALDGTDTDVRPSSQQKSPNT- 203

Query: 69  LIAENPQTEHIRSRSIAEGQIDH 1
              E  Q+  +RS+SI  GQ  H
Sbjct: 204 ---EAGQSNIMRSQSILFGQHHH 223


>ref|XP_002301358.1| predicted protein [Populus trichocarpa] gi|222843084|gb|EEE80631.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 41/80 (51%), Positives = 53/80 (66%)
 Frame = -2

Query: 249 TEKMTTLKSKKAIFVSQQADLSCHIWFVCQGCLIQTRKGSLDGTEIRVTETPLESSPLTS 70
           ++ M  +KSKKAI V  QA  SCHIWF+C+G LI TR+G+LDGT   V  +  ++SP T 
Sbjct: 142 SKNMMDIKSKKAISVCLQAPASCHIWFICKGHLIHTREGALDGTGTDVGSSSQQTSPHT- 200

Query: 69  LIAENPQTEHIRSRSIAEGQ 10
              E  Q  H+RS+SIA GQ
Sbjct: 201 ---EAGQLSHMRSQSIALGQ 217


>emb|CBI22698.3| unnamed protein product [Vitis vinifera]
          Length = 840

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
 Frame = -2

Query: 249 TEKMTTLKSKKAIFVSQQADLSCHIWFVCQGCLIQTRKGSLDGTEIRVTETPLESSPLTS 70
           ++KM  LKSKKAIFV QQA LSCHIWF C+G LI TR GS      R  ET +E SP   
Sbjct: 141 SKKMAELKSKKAIFVCQQAPLSCHIWFACKGYLIYTR-GS------RQVETEIEVSPPLL 193

Query: 69  LI---AENPQTEHIRSRSIAEGQ 10
           L+    E+ Q+ ++ S SI   Q
Sbjct: 194 LLNKNVESKQSANLISESITYKQ 216


>ref|XP_002272091.1| PREDICTED: U-box domain-containing protein 33-like [Vitis vinifera]
          Length = 823

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
 Frame = -2

Query: 249 TEKMTTLKSKKAIFVSQQADLSCHIWFVCQGCLIQTRKGSLDGTEIRVTETPLESSPLTS 70
           ++KM  LKSKKAIFV QQA LSCHIWF C+G LI TR GS      R  ET +E SP   
Sbjct: 141 SKKMAELKSKKAIFVCQQAPLSCHIWFACKGYLIYTR-GS------RQVETEIEVSPPLL 193

Query: 69  LI---AENPQTEHIRSRSIAEGQ 10
           L+    E+ Q+ ++ S SI   Q
Sbjct: 194 LLNKNVESKQSANLISESITYKQ 216


>ref|XP_002274993.2| PREDICTED: U-box domain-containing protein 33-like [Vitis vinifera]
           gi|297745303|emb|CBI40383.3| unnamed protein product
           [Vitis vinifera]
          Length = 881

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/80 (42%), Positives = 49/80 (61%)
 Frame = -2

Query: 249 TEKMTTLKSKKAIFVSQQADLSCHIWFVCQGCLIQTRKGSLDGTEIRVTETPLESSPLTS 70
           + +M   KSKKA +V  +A L CHIWFVC+G LI TR+GSL+G +I +   P + +   +
Sbjct: 170 SRRMLEPKSKKAAYVRDKAPLFCHIWFVCRGHLIYTREGSLNGADIELRTPPSQQASPNN 229

Query: 69  LIAENPQTEHIRSRSIAEGQ 10
              E  Q+   RS S++ GQ
Sbjct: 230 ---ETGQSNTFRSMSVSLGQ 246


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