BLASTX nr result

ID: Coptis23_contig00026992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026992
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79632.1| hypothetical protein VITISV_038058 [Vitis vinifera]    52   9e-10
emb|CAN67611.1| hypothetical protein VITISV_011154 [Vitis vinifera]    52   1e-09
emb|CAN70082.1| hypothetical protein VITISV_008997 [Vitis vinifera]    51   1e-09
emb|CAN80433.1| hypothetical protein VITISV_014126 [Vitis vinifera]    50   3e-09
emb|CAN81727.1| hypothetical protein VITISV_017319 [Vitis vinifera]    51   3e-09

>emb|CAN79632.1| hypothetical protein VITISV_038058 [Vitis vinifera]
          Length = 890

 Score = 52.4 bits (124), Expect(2) = 9e-10
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
 Frame = -3

Query: 288 SISLQRLTVAPIRPKQQPS--------WMDPLKQYLLDGTLPSDEKQAWXXXXXXXXXXX 133
           S+ ++   + PI  +  PS        W   + +YL  GTLP D KQA            
Sbjct: 479 SLPIKEAILLPIHVQANPSANQTNDQEWTHDIAEYLRTGTLPGDPKQAHKIRVQAARFTH 538

Query: 132 LDGELYNQSFGGPHLRCLTPKEAELI 55
           + G LY +SF GP+LRCL   EA+ +
Sbjct: 539 IGGHLYKRSFTGPYLRCLGHSEAQYV 564



 Score = 35.4 bits (80), Expect(2) = 9e-10
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 52  EIHSGECGNHSGGRSLA 2
           E+H G CGNHSGGRSLA
Sbjct: 567 ELHEGICGNHSGGRSLA 583


>emb|CAN67611.1| hypothetical protein VITISV_011154 [Vitis vinifera]
          Length = 880

 Score = 51.6 bits (122), Expect(2) = 1e-09
 Identities = 28/69 (40%), Positives = 37/69 (53%)
 Frame = -3

Query: 270 LTVAPIRPKQQPSWMDPLKQYLLDGTLPSDEKQAWXXXXXXXXXXXLDGELYNQSFGGPH 91
           +T+   +P  Q  W + + QYL  GTLP D KQA            + G LY +SF GP+
Sbjct: 489 VTIEANQPDGQ-EWTNNIAQYLRTGTLPEDPKQAHKIRVQAARFTLIGGHLYKRSFTGPY 547

Query: 90  LRCLTPKEA 64
           LRCL+  EA
Sbjct: 548 LRCLSHSEA 556



 Score = 35.8 bits (81), Expect(2) = 1e-09
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 52  EIHSGECGNHSGGRSLA 2
           E+H G CGNHSGGRSLA
Sbjct: 562 ELHEGVCGNHSGGRSLA 578


>emb|CAN70082.1| hypothetical protein VITISV_008997 [Vitis vinifera]
          Length = 938

 Score = 50.8 bits (120), Expect(2) = 1e-09
 Identities = 25/66 (37%), Positives = 33/66 (50%)
 Frame = -3

Query: 252 RPKQQPSWMDPLKQYLLDGTLPSDEKQAWXXXXXXXXXXXLDGELYNQSFGGPHLRCLTP 73
           R      W + + +YL  GTLP D KQA              G LY +SF GP+LRCL+ 
Sbjct: 543 RQANDQEWTNNITEYLRIGTLPEDPKQAHKVRVQAARFTLRGGHLYKRSFTGPYLRCLSH 602

Query: 72  KEAELI 55
            EA+ +
Sbjct: 603 PEAQYV 608



 Score = 36.2 bits (82), Expect(2) = 1e-09
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = -2

Query: 55  LEIHSGECGNHSGGRSLA 2
           +E+H G CGNHSGGRSLA
Sbjct: 610 VELHEGVCGNHSGGRSLA 627


>emb|CAN80433.1| hypothetical protein VITISV_014126 [Vitis vinifera]
          Length = 985

 Score = 50.1 bits (118), Expect(2) = 3e-09
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
 Frame = -3

Query: 288 SISLQRLTVAPIRPKQQP-----SWMDPLKQYLLDGTLPSDEKQAWXXXXXXXXXXXLDG 124
           S+ ++ + + PI  +  P      W D + +YL  GTLP D KQA            + G
Sbjct: 551 SLPIKEVILLPIHVQIDPYTNDQDWTDNVAEYLRTGTLPGDPKQAHKIRVQAARFTLIGG 610

Query: 123 ELYNQSFGGPHLRCLTPKEAE 61
            LY +SF  P+LRCL   EA+
Sbjct: 611 HLYKRSFTRPYLRCLGHSEAQ 631



 Score = 36.2 bits (82), Expect(2) = 3e-09
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = -2

Query: 85  VSHT*GGRADLEIHSGECGNHSGGRSLA 2
           + H+    A  E+H G CGNHSGGRSLA
Sbjct: 625 LGHSEAQYALAELHEGVCGNHSGGRSLA 652


>emb|CAN81727.1| hypothetical protein VITISV_017319 [Vitis vinifera]
          Length = 660

 Score = 50.8 bits (120), Expect(2) = 3e-09
 Identities = 24/59 (40%), Positives = 33/59 (55%)
 Frame = -3

Query: 231 WMDPLKQYLLDGTLPSDEKQAWXXXXXXXXXXXLDGELYNQSFGGPHLRCLTPKEAELI 55
           WM+ + +Y+  GTLP D KQA            + G LY +SF GP+LRCL   EA+ +
Sbjct: 536 WMNGITEYIRTGTLPGDLKQAHKVRVQAACFTLIGGHLYKRSFTGPYLRCLGHSEAQYV 594



 Score = 35.4 bits (80), Expect(2) = 3e-09
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 52  EIHSGECGNHSGGRSLA 2
           E+H G CGNHSGGRSLA
Sbjct: 597 ELHEGICGNHSGGRSLA 613


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