BLASTX nr result

ID: Coptis23_contig00026987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026987
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331921.1| predicted protein [Populus trichocarpa] gi|2...   226   7e-57
ref|XP_002305691.1| predicted protein [Populus trichocarpa] gi|2...   224   3e-56
ref|XP_002516352.1| hypothetical protein RCOM_1402790 [Ricinus c...   219   1e-54
emb|CAN81192.1| hypothetical protein VITISV_022847 [Vitis vinifera]   215   2e-53
ref|XP_003620160.1| hypothetical protein MTR_6g077930 [Medicago ...   212   2e-52

>ref|XP_002331921.1| predicted protein [Populus trichocarpa] gi|222874593|gb|EEF11724.1|
            predicted protein [Populus trichocarpa]
          Length = 1150

 Score =  226 bits (577), Expect = 7e-57
 Identities = 126/326 (38%), Positives = 188/326 (57%), Gaps = 16/326 (4%)
 Frame = +3

Query: 252  RKDRPRDYITASTKGNNTDLLSIGSEMAAKALNASYQLQILSESIQQATGSPLAEFEKLL 431
            +K    D +T+ +           S    +A+  + ++Q+ SE+IQ A G P+AEFE+ L
Sbjct: 755  KKHVAADALTSESSYQQFSAFEDESIKIIQAVKDTCRVQMESEAIQMAAGGPIAEFERFL 814

Query: 432  QXXXXXXXXXXXXLLQCRACLGNLHPFSSLCKHQLANISLRDVWSWYEKPGNYGLEVRAE 611
                         L  C+ CL +    +SLC+H++ NI L  +W WYE+ GNYGLEVRAE
Sbjct: 815  HLSSPVINFPS--LSCCQTCLDDRLVGASLCRHEIPNIPLGCIWKWYEEHGNYGLEVRAE 872

Query: 612  DTKTLKGMNIDSLSFNAHFVPFLSAIQLF-GHSQK---SRHSESVGHLSPEFSKNGEAEN 779
            + +     + D  SF+ +FVPFLSA+QLF  HS +   +++S     +S  +  +  +EN
Sbjct: 873  ECENSNSGSFDHFSFHGYFVPFLSAVQLFKNHSSQPINNKNSAPDHEISDTYKASESSEN 932

Query: 780  NYFHVEESIDELASSPGIISADGRDFSGLSSAPSCSNDMNLIFEFFESEQPQQRKPLYAK 959
            +      ++  L     +I          S   +CS+   L+FE+FESEQPQQR+PLY K
Sbjct: 933  S------NVGRLPIFSLLIPQPRTTAVAQSVNLTCSDGAELLFEYFESEQPQQRRPLYEK 986

Query: 960  VREIVKV-GTSNHQVFGDPSGLQCMQLHNIHPASWYSVAWYPIYRIPEGNFRASFLTYHS 1136
            ++E+ +   +S ++++GDP+ L  + LH++HP SWYSVAWYPIYRIP+G+FRA+FLTYHS
Sbjct: 987  IQELARGDASSRYKMYGDPTNLASLNLHDLHPRSWYSVAWYPIYRIPDGHFRAAFLTYHS 1046

Query: 1137 LGHLVQR-----------CIAEPLKG 1181
            LGHLV +           CI  P+ G
Sbjct: 1047 LGHLVHKSAEVDYASKDACIVSPVVG 1072


>ref|XP_002305691.1| predicted protein [Populus trichocarpa] gi|222848655|gb|EEE86202.1|
            predicted protein [Populus trichocarpa]
          Length = 1132

 Score =  224 bits (571), Expect = 3e-56
 Identities = 120/293 (40%), Positives = 172/293 (58%), Gaps = 12/293 (4%)
 Frame = +3

Query: 339  KALNASYQLQILSESIQQATGSPLAEFEKLLQXXXXXXXXXXXXLLQCRACLGNLHPFSS 518
            +A+  + ++Q+  E+IQ +TGSP+AEFE+ L             L  C+ CL +    + 
Sbjct: 768  QAVKDACRVQMECEAIQMSTGSPVAEFERFLHFSSPVISQLPG-LSCCQTCLCDRLVGAR 826

Query: 519  LCKHQLANISLRDVWSWYEKPGNYGLEVRAEDTKTLKGMNIDSLSFNAHFVPFLSAIQLF 698
             C+H++  I L  +W WYE+ GNYGLEVRAED +  K + +D +SF  +FVPFLSAIQLF
Sbjct: 827  PCRHEIPYIPLGCLWKWYEEHGNYGLEVRAEDFENSKSLGLDCVSFRGYFVPFLSAIQLF 886

Query: 699  GHSQKSRHSESVGHLSPEFSKNGEAENNYFHVEESIDELASSPGIISADGRDFSGLSSAP 878
                   H+    + +P+    G  E +    +     L     +I       +  S   
Sbjct: 887  -----KNHTSQPINKAPDHGIFGTHEASESSEDSKAGRLPIFSVLIPKPRTTAAAQSVDV 941

Query: 879  SCSNDMNLIFEFFESEQPQQRKPLYAKVREIVKVGTSNH-QVFGDPSGLQCMQLHNIHPA 1055
            +CS+D  L+FE+FE EQPQQR+P Y K++E+V+   S+  +++GDP+ L  + LH++HP 
Sbjct: 942  ACSDDAELLFEYFEPEQPQQRQPFYEKIQELVRGNASSRCKMYGDPTNLASLNLHDLHPR 1001

Query: 1056 SWYSVAWYPIYRIPEGNFRASFLTYHSLGHLVQR-----------CIAEPLKG 1181
            SWYSVAWYPIYRIP+GNFR +FLTYHSLGHLV R           C+  P+ G
Sbjct: 1002 SWYSVAWYPIYRIPDGNFRTAFLTYHSLGHLVHRSAKFDSPSKNECVVSPVVG 1054


>ref|XP_002516352.1| hypothetical protein RCOM_1402790 [Ricinus communis]
            gi|223544518|gb|EEF46036.1| hypothetical protein
            RCOM_1402790 [Ricinus communis]
          Length = 951

 Score =  219 bits (557), Expect = 1e-54
 Identities = 120/329 (36%), Positives = 184/329 (55%), Gaps = 15/329 (4%)
 Frame = +3

Query: 219  NSVCKNTEHNF----RKDRPR----------DYITASTKGNNTDLLSIGSEMAAKALNAS 356
            N+ C + E NF    R   P           D +T+  + +N  +  + S     A+N +
Sbjct: 607  NASCLSREDNFIPKPRNPNPMLKHNGNHVTADCLTSEFQDHNCSVSEVESSKILHAVNDA 666

Query: 357  YQLQILSESIQQATGSPLAEFEKLLQXXXXXXXXXXXXLLQCRACLGNLHPFSSLCKHQL 536
             ++Q+ SE++Q   G P+AE E+ L             L  C  CL +     +LC+ ++
Sbjct: 667  CRIQLKSEAVQMVIGGPIAELERFLHFSSPVICQLPSFL--CCPCLRDQLVHVALCRDEI 724

Query: 537  ANISLRDVWSWYEKPGNYGLEVRAEDTKTLKGMNIDSLSFNAHFVPFLSAIQLFGHSQKS 716
             NISL  VW WYEK G+YGLE++AED +  + + +D  +F A+FVP+LSA+QL+   +  
Sbjct: 725  PNISLGCVWQWYEKHGSYGLEIKAEDYRNSRRLGLDHGTFCAYFVPYLSAVQLWKRHEPI 784

Query: 717  RHSESVGHLSPEFSKNGEAENNYFHVEESIDELASSPGIISADGRDFSGLSSAPSCSNDM 896
              + +  H +  FS+  E           + ++   P       +  S  S+  + S+D+
Sbjct: 785  MRNNNEDH-AHRFSERCEISIASEKCSNGLPQMVLQPC------KRESSKSAEVTPSDDI 837

Query: 897  NLIFEFFESEQPQQRKPLYAKVREIVKV-GTSNHQVFGDPSGLQCMQLHNIHPASWYSVA 1073
             L+FE+FES+QP++R PLY K+  +V+  G    +++GDP+ L  + LH++HP SWYSVA
Sbjct: 838  ELLFEYFESDQPRRRLPLYEKIHALVRGDGPKQGKIYGDPTNLSSLNLHDLHPVSWYSVA 897

Query: 1074 WYPIYRIPEGNFRASFLTYHSLGHLVQRC 1160
            WYPIYRIP+GNFRA+FLTYHS  HLV RC
Sbjct: 898  WYPIYRIPDGNFRAAFLTYHSFSHLVSRC 926


>emb|CAN81192.1| hypothetical protein VITISV_022847 [Vitis vinifera]
          Length = 1239

 Score =  215 bits (547), Expect = 2e-53
 Identities = 129/325 (39%), Positives = 183/325 (56%), Gaps = 24/325 (7%)
 Frame = +3

Query: 279  TASTKGNNTDLLSIGSEMAAKALNASYQLQILSESIQQATGSPLAEFEKLLQXXXXXXXX 458
            T S K  +       S   + AL+ +Y++Q LSES+Q ATG P+A+FE+LL         
Sbjct: 851  THSCKEKHIYAFGADSSKISGALHDAYRVQQLSESVQLATGCPIADFERLLHAASPIICR 910

Query: 459  XXXXLLQCRACLGNLHPFSSLCKHQLANISLRDVWSWYEKPGNYGLEVRAEDTKTLKGMN 638
                 + C+ C+ +      LC+H+  NI+LR +W WYEK G+YGLEVR ED +  K + 
Sbjct: 911  SNSVKI-CQTCVRD-EVGRPLCRHEAPNITLRSLWKWYEKHGSYGLEVRLEDCEYSKRLG 968

Query: 639  IDSLSFNAHFVPFLSAIQLFGHSQKSRHSES--VGHLSPEFSKNGEAENNYFHV------ 794
                +F A+FVP LSA+QLF    +S H ++  V   + E SK  ++  N   +      
Sbjct: 969  FYHSAFRAYFVPSLSAVQLF-KKPRSHHMDNGPVVSRACEMSKTSQSSFNIGQLPIFSIL 1027

Query: 795  --EESIDELASSPGIISADGRDFSGLSSA--PSCSNDMNLIFEFFESEQPQQRKPLYAKV 962
                  +E + SP          S +S +   + ++D  L+FE+FES+QPQ RKPL+ K+
Sbjct: 1028 FPRPCTEETSFSPLENQMHSSQVSSMSQSVDTTITDDSELLFEYFESDQPQLRKPLFEKI 1087

Query: 963  REIVKV-GTSNHQVFGDPSGLQCMQLHNIHPASWYSVAWYPIYRIPEGNFRASFLTYHSL 1139
            +E+V   G S ++V+GDP+ L  M L  +H +SWYSVAWYPIYRIP+G FRA+FLTYHS 
Sbjct: 1088 KELVSGDGPSWNKVYGDPTKLDSMNLDELHHSSWYSVAWYPIYRIPDGEFRAAFLTYHSF 1147

Query: 1140 GHLVQR-----------CIAEPLKG 1181
            GHLV R           CI  P+ G
Sbjct: 1148 GHLVHRSSTFDSHRKDACIVSPVVG 1172


>ref|XP_003620160.1| hypothetical protein MTR_6g077930 [Medicago truncatula]
            gi|355495175|gb|AES76378.1| hypothetical protein
            MTR_6g077930 [Medicago truncatula]
          Length = 1107

 Score =  212 bits (539), Expect = 2e-52
 Identities = 123/287 (42%), Positives = 170/287 (59%), Gaps = 4/287 (1%)
 Frame = +3

Query: 309  LLSIGSEMAAKALNASYQLQILSESIQQATGSPLAEFEKLLQXXXXXXXXXXXXLLQCRA 488
            LL   S   A+A+N + ++Q+  + + + TG+P+AEFEKLL             L  C  
Sbjct: 744  LLENDSYRIAQAVNDACRVQLACDVVHKVTGAPVAEFEKLLHFCSPVICRSPDSL-GCFT 802

Query: 489  CLGNLHPFSSLCKHQLANISLRDVWSWYEKPGNYGLEVRA---EDTKTLKGMNIDSLSFN 659
            C  N      LC+H++  +SL  +W WYEK G+YGLE+RA   ED KTL G  +    F 
Sbjct: 803  CAKNHLIGVPLCRHEIPEVSLGCLWEWYEKHGSYGLEIRAWDYEDPKTLGG--VGHFPFR 860

Query: 660  AHFVPFLSAIQLFGHSQKSRHSESVGHLSPEFSKNGEAENNYFHVEESIDELASSPGIIS 839
            A+FVP LSA+QLF + +    + SV  L+ + S+  E  +N    E+S     S+    S
Sbjct: 861  AYFVPSLSAVQLFKNRESRCVNNSVSFLNCKVSEACEMIDNS---EDSFIGRFSNASNPS 917

Query: 840  ADGRDFSGLSSAPSCSNDMNLIFEFFESEQPQQRKPLYAKVREIVKVGTS-NHQVFGDPS 1016
             D           +CS D  L+FE+FE EQPQQR+PLY +++E+V+       + +GD +
Sbjct: 918  TDS----------TCSGDSELLFEYFECEQPQQRRPLYERIQELVRGDVQIQSKTYGDAT 967

Query: 1017 GLQCMQLHNIHPASWYSVAWYPIYRIPEGNFRASFLTYHSLGHLVQR 1157
             L+ + L ++HP SWYSVAWYPIYRIP+GNFRASFLTYHSLGHLV R
Sbjct: 968  KLESINLRDLHPRSWYSVAWYPIYRIPDGNFRASFLTYHSLGHLVCR 1014


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