BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026968
         (1588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|...   381   e-120
ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|2...   350   e-113
ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]    348   e-111
ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9...   348   e-111
ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]        333   e-108

>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|297737327|emb|CBI26528.3|
            unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  381 bits (979), Expect(2) = e-120
 Identities = 187/292 (64%), Positives = 233/292 (79%)
 Frame = +3

Query: 483  GMLPPFATQSEETKTVARHCTAGIELRISTERLILLDTQPVFSPSVLAEMMRPDGSSTIS 662
            GMLPPFA QSE+ + +ARHCT GIE RIS ERLILLDTQPVFSPSVLAEMMRPDGSSTIS
Sbjct: 121  GMLPPFAIQSEDIRAMARHCTVGIEPRISAERLILLDTQPVFSPSVLAEMMRPDGSSTIS 180

Query: 663  LLNGEVLPADLAHELIGIQLGVFLASVCHVLLVVTEGIYDTDMWHLMLTADLLKHGIPDP 842
            +L GE L ++LAHEL+GIQLGV LAS+CH+LLV+++G++D +MW LMLT DLLKHGIPD 
Sbjct: 181  VLGGESLSSELAHELMGIQLGVLLASICHILLVISDGVHDINMWRLMLTVDLLKHGIPDL 240

Query: 843  SSLTPSHSQGTNLGTEKELNDVLRRNGEDYLASPVFVHTKLQDQETAPHKILQLRKTLAQ 1022
            SSLTPSHSQ +NLG++KE  D +   GE+YLA+P+FVHTKL+DQ+  P   + LRK LAQ
Sbjct: 241  SSLTPSHSQNSNLGSDKEGKDKVLEGGEEYLAAPIFVHTKLRDQDITPRNFVHLRKALAQ 300

Query: 1023 YFSSSSFMGLNHGRIPKEQIFSVKTRNINTQDLDSREVNLVLLPYRNQDEPQAAQYESFD 1202
            +FSSS+F+    G   KE + S    N+ + DLDS   NL L+P +++ +   AQYES+ 
Sbjct: 301  FFSSSTFVKEKCGNTTKEHLVSSVPPNMPSTDLDSTLPNLFLVPCKSKVDSPRAQYESYT 360

Query: 1203 TMLGKLRDQVLSMNCHSFAKSVSEREWLRNSTRIWESVKNSPVFSEYRRTLQ 1358
            +ML KLRDQVLSMNC SFA+++SER+WLRNS +IWE VKNSP+ +EY +TLQ
Sbjct: 361  SMLWKLRDQVLSMNCPSFARTISERDWLRNSAKIWELVKNSPIIAEYCKTLQ 412



 Score = 78.6 bits (192), Expect(2) = e-120
 Identities = 35/52 (67%), Positives = 44/52 (84%)
 Frame = +1

Query: 220 VASVNLLSPDSWDLHIDKILPYLTENSDFKVIGVIGTPGSGKSTIMNQLYGF 375
           + S+NLLS DSW+ H D+ LP+LT+N+DF V+GVIG PG GKSTIMN+LYGF
Sbjct: 65  IGSLNLLS-DSWEFHTDRFLPFLTDNTDFTVVGVIGPPGVGKSTIMNELYGF 115


>ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|222839217|gb|EEE77568.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  350 bits (899), Expect(2) = e-113
 Identities = 178/292 (60%), Positives = 223/292 (76%)
 Frame = +3

Query: 483  GMLPPFATQSEETKTVARHCTAGIELRISTERLILLDTQPVFSPSVLAEMMRPDGSSTIS 662
            GMLPPF  QSE+ + +ARHC+ GIE RIS ERLILLDTQPVFSPSVLAEMMRPDGSSTIS
Sbjct: 111  GMLPPFTVQSEDNRAMARHCSVGIEPRISAERLILLDTQPVFSPSVLAEMMRPDGSSTIS 170

Query: 663  LLNGEVLPADLAHELIGIQLGVFLASVCHVLLVVTEGIYDTDMWHLMLTADLLKHGIPDP 842
            +L+GE L  +LAHEL  IQLGV LAS+CHVLLVV++G+YD  M HLMLT DLLKHGIPDP
Sbjct: 171  VLSGENLSTELAHELTAIQLGVLLASICHVLLVVSDGVYDDSMRHLMLTVDLLKHGIPDP 230

Query: 843  SSLTPSHSQGTNLGTEKELNDVLRRNGEDYLASPVFVHTKLQDQETAPHKILQLRKTLAQ 1022
            SSL  ++ Q +N GTEKE  D +    E+Y+A+P+FVHTKLQD++  P   ++LRK LAQ
Sbjct: 231  SSLNSAYLQSSNAGTEKENKDKV-SEAEEYMATPLFVHTKLQDKDFTPCNFVELRKELAQ 289

Query: 1023 YFSSSSFMGLNHGRIPKEQIFSVKTRNINTQDLDSREVNLVLLPYRNQDEPQAAQYESFD 1202
            YFSSSSF+    G + KEQI      N +  D DS+ +NL ++P +++D+   AQY+S+ 
Sbjct: 290  YFSSSSFIKEKGGSMEKEQISYSVPSNSHDNDPDSKSINLFVIPLKDKDDSLKAQYKSYI 349

Query: 1203 TMLGKLRDQVLSMNCHSFAKSVSEREWLRNSTRIWESVKNSPVFSEYRRTLQ 1358
            + L KLRDQVLSMN  SFA++VSER+WL+NS +IWE VK S + +EY + LQ
Sbjct: 350  SALWKLRDQVLSMNGLSFARTVSERDWLKNSAKIWELVKGSAIIAEYGQALQ 401



 Score = 85.5 bits (210), Expect(2) = e-113
 Identities = 42/66 (63%), Positives = 51/66 (77%), Gaps = 6/66 (9%)
 Frame = +1

Query: 211 HHH------VASVNLLSPDSWDLHIDKILPYLTENSDFKVIGVIGTPGSGKSTIMNQLYG 372
           HHH      + S+NLLS DSWD HID+ LP+LTEN+DF V+G+IG PG GKSTI+N+LYG
Sbjct: 46  HHHRSRLPSITSLNLLS-DSWDFHIDRFLPFLTENTDFTVVGIIGPPGVGKSTILNELYG 104

Query: 373 FHDATS 390
           F D TS
Sbjct: 105 F-DGTS 109


>ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]
          Length = 412

 Score =  348 bits (893), Expect(2) = e-111
 Identities = 167/292 (57%), Positives = 222/292 (76%)
 Frame = +3

Query: 483  GMLPPFATQSEETKTVARHCTAGIELRISTERLILLDTQPVFSPSVLAEMMRPDGSSTIS 662
            GMLPPF   SE+ + +ARHCT GIE RIS+ER+ILLDTQPVFSPSVLAE+MRPDGSST+S
Sbjct: 115  GMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVS 174

Query: 663  LLNGEVLPADLAHELIGIQLGVFLASVCHVLLVVTEGIYDTDMWHLMLTADLLKHGIPDP 842
            ++NGE   A+LAHEL+ IQLG+ LAS+C+++LV++EG++D +MWHLMLT DLLKHG+PDP
Sbjct: 175  VINGESPSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDLLKHGLPDP 234

Query: 843  SSLTPSHSQGTNLGTEKELNDVLRRNGEDYLASPVFVHTKLQDQETAPHKILQLRKTLAQ 1022
            SS   SH+Q +N+ +EKE  +      E+Y+A+P+FVH K+QD++  P  ILQL++  A 
Sbjct: 235  SSPISSHAQNSNVASEKEYKE-KTSTSEEYMATPIFVHAKVQDRDLVPQNILQLKRAFAY 293

Query: 1023 YFSSSSFMGLNHGRIPKEQIFSVKTRNINTQDLDSREVNLVLLPYRNQDEPQAAQYESFD 1202
            YF +SSFMG    ++  EQ+ S    +    D+D  +  L+L+P RN+D+    QYESF+
Sbjct: 294  YFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTRGQYESFN 353

Query: 1203 TMLGKLRDQVLSMNCHSFAKSVSEREWLRNSTRIWESVKNSPVFSEYRRTLQ 1358
              L KLRDQVLSMN  SF ++VSER+WL+NS +IWESVK+SP+  EY RTLQ
Sbjct: 354  LALWKLRDQVLSMNGASFPRTVSERDWLKNSVKIWESVKSSPIVMEYARTLQ 405



 Score = 82.4 bits (202), Expect(2) = e-111
 Identities = 36/52 (69%), Positives = 47/52 (90%)
 Frame = +1

Query: 220 VASVNLLSPDSWDLHIDKILPYLTENSDFKVIGVIGTPGSGKSTIMNQLYGF 375
           + S+NLLS DSWDLHID+ LP+LTEN++FKV+G+IG PG GKSTIMN++YG+
Sbjct: 59  LGSLNLLS-DSWDLHIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGY 109


>ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9-like [Cucumis sativus]
          Length = 411

 Score =  348 bits (892), Expect(2) = e-111
 Identities = 167/292 (57%), Positives = 221/292 (75%)
 Frame = +3

Query: 483  GMLPPFATQSEETKTVARHCTAGIELRISTERLILLDTQPVFSPSVLAEMMRPDGSSTIS 662
            GMLPPF   SE+ + +ARHCT GIE RIS+ER+ILLDTQPVFSPSVLAE+MRPDGSST+S
Sbjct: 115  GMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVS 174

Query: 663  LLNGEVLPADLAHELIGIQLGVFLASVCHVLLVVTEGIYDTDMWHLMLTADLLKHGIPDP 842
            ++NGE   A+LAHEL+ IQLG+ LAS+C+++LV++EG++D +MWHLMLT DLLKHG+PDP
Sbjct: 175  VINGESPSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDLLKHGLPDP 234

Query: 843  SSLTPSHSQGTNLGTEKELNDVLRRNGEDYLASPVFVHTKLQDQETAPHKILQLRKTLAQ 1022
            SS   SH+Q +N+ +EKE         E+Y+A+P+FVH K+QD++  P  ILQL++  A 
Sbjct: 235  SSPISSHAQNSNVASEKEYKKT--STSEEYMATPIFVHAKVQDRDLVPQNILQLKRAFAY 292

Query: 1023 YFSSSSFMGLNHGRIPKEQIFSVKTRNINTQDLDSREVNLVLLPYRNQDEPQAAQYESFD 1202
            YF +SSFMG    ++  EQ+ S    +    D+D  +  L+L+P RN+D+    QYESF+
Sbjct: 293  YFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTRGQYESFN 352

Query: 1203 TMLGKLRDQVLSMNCHSFAKSVSEREWLRNSTRIWESVKNSPVFSEYRRTLQ 1358
              L KLRDQVLSMN  SF ++VSER+WL+NS +IWESVK+SP+  EY RTLQ
Sbjct: 353  LALWKLRDQVLSMNGASFPRTVSERDWLKNSVKIWESVKSSPIVMEYARTLQ 404



 Score = 82.4 bits (202), Expect(2) = e-111
 Identities = 36/52 (69%), Positives = 47/52 (90%)
 Frame = +1

Query: 220 VASVNLLSPDSWDLHIDKILPYLTENSDFKVIGVIGTPGSGKSTIMNQLYGF 375
           + S+NLLS DSWDLHID+ LP+LTEN++FKV+G+IG PG GKSTIMN++YG+
Sbjct: 59  LGSLNLLS-DSWDLHIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGY 109


>ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]
          Length = 392

 Score =  333 bits (855), Expect(2) = e-108
 Identities = 176/292 (60%), Positives = 214/292 (73%)
 Frame = +3

Query: 483  GMLPPFATQSEETKTVARHCTAGIELRISTERLILLDTQPVFSPSVLAEMMRPDGSSTIS 662
            GMLPPFA QSEET+ +ARHC+ GIE RISTER+ILLDTQPVFS SVLAEMMRPDGSSTIS
Sbjct: 103  GMLPPFAIQSEETRAMARHCSTGIEPRISTERIILLDTQPVFSASVLAEMMRPDGSSTIS 162

Query: 663  LLNGEVLPADLAHELIGIQLGVFLASVCHVLLVVTEGIYDTDMWHLMLTADLLKHGIPDP 842
            +L+GE L A+LAHELIGIQL V LAS+CH+LLVV+EG++D  +WHLMLT DLLKHGI DP
Sbjct: 163  VLSGETLSAELAHELIGIQLAVLLASICHILLVVSEGVHDDSLWHLMLTVDLLKHGISDP 222

Query: 843  SSLTPSHSQGTNLGTEKELNDVLRRNGEDYLASPVFVHTKLQDQETAPHKILQLRKTLAQ 1022
            S +T S SQ ++ G EK   D L  + E+Y+A+PVFVHTKLQDQ+  P   +QLRK L Q
Sbjct: 223  SLMTSSLSQSSSSGLEK---DKLPEH-EEYMATPVFVHTKLQDQDFTPSNFVQLRKALMQ 278

Query: 1023 YFSSSSFMGLNHGRIPKEQIFSVKTRNINTQDLDSREVNLVLLPYRNQDEPQAAQYESFD 1202
            YF  SSF  +     P+E + S   R      +DS  +    +P + +DE  +AQ+ES+ 
Sbjct: 279  YFRPSSF--VREQNKPEEHVSSSLVRG---SQMDSNLIKFYAIPLKKKDENPSAQHESYV 333

Query: 1203 TMLGKLRDQVLSMNCHSFAKSVSEREWLRNSTRIWESVKNSPVFSEYRRTLQ 1358
            + L KLRDQ+LSM   SF + VSEREWL+NS +IWE VKNS    EY RTLQ
Sbjct: 334  SALWKLRDQILSMKSPSFTRPVSEREWLKNSAKIWEQVKNSATILEYCRTLQ 385



 Score = 86.3 bits (212), Expect(2) = e-108
 Identities = 45/61 (73%), Positives = 50/61 (81%)
 Frame = +1

Query: 220 VASVNLLSPDSWDLHIDKILPYLTENSDFKVIGVIGTPGSGKSTIMNQLYGFHDATSSSA 399
           VAS+NLLS DSWD HID+ LP+LTEN+DF VIGVIG PG GKSTIMN+LYGF    SSS 
Sbjct: 47  VASLNLLS-DSWDFHIDRFLPFLTENTDFTVIGVIGPPGVGKSTIMNELYGF---DSSSP 102

Query: 400 G 402
           G
Sbjct: 103 G 103