BLASTX nr result
ID: Coptis23_contig00026959
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00026959 (465 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002511362.1| adenosine diphosphatase, putative [Ricinus c... 102 4e-20 ref|XP_003550722.1| PREDICTED: nucleoside-diphosphatase mig-23-l... 96 3e-18 ref|XP_002321616.1| predicted protein [Populus trichocarpa] gi|2... 95 5e-18 ref|XP_002278485.2| PREDICTED: nucleoside-diphosphatase mig-23-l... 94 9e-18 emb|CBI14994.3| unnamed protein product [Vitis vinifera] 94 9e-18 >ref|XP_002511362.1| adenosine diphosphatase, putative [Ricinus communis] gi|223550477|gb|EEF51964.1| adenosine diphosphatase, putative [Ricinus communis] Length = 440 Score = 102 bits (253), Expect = 4e-20 Identities = 54/117 (46%), Positives = 71/117 (60%), Gaps = 23/117 (19%) Frame = +2 Query: 41 SHNGVTLQNLTVSPGLVARFHALSGFFAVYNVLNLSPRTNSTTFLEKGWELCSQLWSD-- 214 S+NG + NLT + +RFHALSGFFAVYN+LNL+P+ N T+ EK +LCS W D Sbjct: 274 SYNGNRIFNLTAATNPTSRFHALSGFFAVYNMLNLAPQANMTSIWEKREQLCSTSWGDLS 333 Query: 215 ---------------------LIEDALCMDNPELIFGPGDVSWTLGAALVEGKSIRL 322 LI+DALC+ + E+IF PGD+ WTLGAAL+EG+ + L Sbjct: 334 NISGNQNSFAHYCFQVPYMASLIKDALCLGDFEIIFDPGDIFWTLGAALIEGEYLWL 390 >ref|XP_003550722.1| PREDICTED: nucleoside-diphosphatase mig-23-like [Glycine max] Length = 558 Score = 95.9 bits (237), Expect = 3e-18 Identities = 64/158 (40%), Positives = 84/158 (53%), Gaps = 24/158 (15%) Frame = +2 Query: 50 GVTLQNLTVSPGLVARFHALSGFFAVYNVLNLSPRTNSTTFLEKGWELCSQLWS------ 211 G + NLT + +FHALSGFF VYN L LSPRTN T E G +LCS LWS Sbjct: 376 GTGILNLTAVAHPI-KFHALSGFFFVYNKLKLSPRTNLTMVWESGKQLCSNLWSGLSNVS 434 Query: 212 -----------------DLIEDALCMDNPELIFGPGDVSWTLGAALVEGKSIRLIK*VRS 340 LIE LC+ + E++FGPGD+SWTLGAAL+EGK + L S Sbjct: 435 DNPKYAGQFCFRVAYMASLIEYGLCLGDVEMVFGPGDISWTLGAALIEGKFLWL----NS 490 Query: 341 SRWQLNQLYSE-KNGSPLFSSFFYPSISLSLFYCLWKS 451 +R + + + S KN + S F ++ L L ++ S Sbjct: 491 TRHKSHVIISTLKNVKVMSSPTFLFAVLLLLLLIVYFS 528 >ref|XP_002321616.1| predicted protein [Populus trichocarpa] gi|222868612|gb|EEF05743.1| predicted protein [Populus trichocarpa] Length = 543 Score = 95.1 bits (235), Expect = 5e-18 Identities = 52/116 (44%), Positives = 65/116 (56%), Gaps = 23/116 (19%) Frame = +2 Query: 32 TKLSHNGVTLQNLTVSPGLVARFHALSGFFAVYNVLNLSPRTNSTTFLEKGWELCSQLWS 211 T LS G N RFHALSGFFAVYN+L+L+P N T EKG ++CS+ W Sbjct: 366 TGLSSYGSDTLNFIAGTHPSRRFHALSGFFAVYNMLDLAPIANLTKIWEKGQQMCSKSWP 425 Query: 212 D-----------------------LIEDALCMDNPELIFGPGDVSWTLGAALVEGK 310 D LIEDALC+ + E++FGPGD+SWTLGA+LVE + Sbjct: 426 DSSNTSGNQNNLGKYCFRVPYMASLIEDALCLGDKEIVFGPGDLSWTLGASLVEAE 481 >ref|XP_002278485.2| PREDICTED: nucleoside-diphosphatase mig-23-like [Vitis vinifera] Length = 547 Score = 94.4 bits (233), Expect = 9e-18 Identities = 65/157 (41%), Positives = 81/157 (51%), Gaps = 24/157 (15%) Frame = +2 Query: 41 SHNGVTLQNLTVSPGLVARFHALSGFFAVYNVLNLSPRTNSTTFLEKGWELCSQ------ 202 SH+G + N + A FHALSGFF VY +LNLS R N T E+G LCS+ Sbjct: 366 SHSGSNILNSKATTHAAACFHALSGFFVVYTMLNLSQRANMTEIWERGQLLCSRSDAHFG 425 Query: 203 ---------------LWSDLIEDALCMDNPELIFGPGDVSWTLGAALVEGKSIRLIK*VR 337 + LIED LC+ + E+ FGPGDVSWTLGAALVEG+ + L Sbjct: 426 SISGNYARQFCFSVPYLASLIEDGLCLGDAEINFGPGDVSWTLGAALVEGEYLWLS--TT 483 Query: 338 SSRWQLNQLYSEKNGSPLFSSFFYPSISLSLF---YC 439 +SR ++ L K S L S FF + L L YC Sbjct: 484 NSRLSISSL---KIKSVLASPFFLFILLLGLLLIVYC 517 >emb|CBI14994.3| unnamed protein product [Vitis vinifera] Length = 624 Score = 94.4 bits (233), Expect = 9e-18 Identities = 65/157 (41%), Positives = 81/157 (51%), Gaps = 24/157 (15%) Frame = +2 Query: 41 SHNGVTLQNLTVSPGLVARFHALSGFFAVYNVLNLSPRTNSTTFLEKGWELCSQ------ 202 SH+G + N + A FHALSGFF VY +LNLS R N T E+G LCS+ Sbjct: 443 SHSGSNILNSKATTHAAACFHALSGFFVVYTMLNLSQRANMTEIWERGQLLCSRSDAHFG 502 Query: 203 ---------------LWSDLIEDALCMDNPELIFGPGDVSWTLGAALVEGKSIRLIK*VR 337 + LIED LC+ + E+ FGPGDVSWTLGAALVEG+ + L Sbjct: 503 SISGNYARQFCFSVPYLASLIEDGLCLGDAEINFGPGDVSWTLGAALVEGEYLWLS--TT 560 Query: 338 SSRWQLNQLYSEKNGSPLFSSFFYPSISLSLF---YC 439 +SR ++ L K S L S FF + L L YC Sbjct: 561 NSRLSISSL---KIKSVLASPFFLFILLLGLLLIVYC 594