BLASTX nr result
ID: Coptis23_contig00026950
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00026950
(613 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002515411.1| conserved hypothetical protein [Ricinus comm... 72 3e-15
ref|XP_004145581.1| PREDICTED: uncharacterized protein LOC101212... 65 1e-14
emb|CBI21156.3| unnamed protein product [Vitis vinifera] 67 2e-14
ref|XP_003631800.1| PREDICTED: uncharacterized protein LOC100266... 67 2e-14
emb|CAN79208.1| hypothetical protein VITISV_025934 [Vitis vinifera] 67 2e-14
>ref|XP_002515411.1| conserved hypothetical protein [Ricinus communis]
gi|223545355|gb|EEF46860.1| conserved hypothetical
protein [Ricinus communis]
Length = 766
Score = 72.4 bits (176), Expect(2) = 3e-15
Identities = 32/67 (47%), Positives = 48/67 (71%)
Frame = -2
Query: 612 RSRVAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNG 433
RSR WT +M R++V+L+L+H+ RGN + + N++AWM M ++F KFGSQYD D L +
Sbjct: 14 RSRTYWTPTMERFFVDLMLEHMHRGNRIGHTFNKQAWMDMLAMFNAKFGSQYDKDVLKSR 73
Query: 432 FKSLRKQ 412
+ +L KQ
Sbjct: 74 YTNLWKQ 80
Score = 34.7 bits (78), Expect(2) = 3e-15
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -3
Query: 404 IKNLLGHSGFHFDEMLEMVSVDVHV*DNYVKV 309
+K LLG SGF +DE EMV D +V + Y+KV
Sbjct: 84 VKTLLGQSGFTWDETREMVVADDYVWNAYLKV 115
Score = 58.9 bits (141), Expect(2) = 2e-11
Identities = 29/66 (43%), Positives = 39/66 (59%)
Frame = -2
Query: 612 RSRVAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNG 433
R+R WT M RY ++LLL+ V RGN L + +AW M + F KF S +D D L N
Sbjct: 340 RTRTYWTPPMDRYLIDLLLEQVHRGNKLGQTFISQAWTDMVASFNVKFQSHHDKDVLKNR 399
Query: 432 FKSLRK 415
+K LR+
Sbjct: 400 YKHLRR 405
Score = 35.0 bits (79), Expect(2) = 2e-11
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = -3
Query: 410 SVIKNLLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
S IKNLL +SGF +D EM++ + HV D Y K
Sbjct: 408 SDIKNLLENSGFSWDSTREMITAEDHVWDAYTK 440
Score = 55.8 bits (133), Expect(2) = 5e-09
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = -2
Query: 612 RSRVAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNG 433
R R WT +M +Y++ LLLDH+ +GN + N++AW M + F +FG Q+ L +
Sbjct: 178 RPRTEWTAAMDQYFLELLLDHIVKGNKADNAFNKQAWTKMLASFNARFGPQHGKRVLRHR 237
Query: 432 FKSLRK 415
+K L K
Sbjct: 238 YKKLSK 243
Score = 30.0 bits (66), Expect(2) = 5e-09
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -3
Query: 410 SVIKNLLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
S +K LL +GF +DEM +M+ D V D Y+K
Sbjct: 246 SDMKYLLKQNGFSWDEMEQMIVADNDVWDAYIK 278
Score = 52.0 bits (123), Expect(2) = 3e-07
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = -2
Query: 609 SRVAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNGF 430
S + W M RY ++L+L+ V GN + + N++AW L+ F EKFG + L+N +
Sbjct: 498 STIDWQPPMSRYLIDLMLEQVHGGNKIDYTFNEQAWTLIVESFNEKFGVLFSRYILENRY 557
Query: 429 KSLRKQ 412
+L K+
Sbjct: 558 ITLMKE 563
Score = 27.7 bits (60), Expect(2) = 3e-07
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 404 IKNLLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
I LL HSGF +D +MV+ D V + Y++
Sbjct: 567 INGLLSHSGFAWDVTQQMVTADDAVWEAYIQ 597
>ref|XP_004145581.1| PREDICTED: uncharacterized protein LOC101212813 [Cucumis sativus]
gi|449515081|ref|XP_004164578.1| PREDICTED:
uncharacterized LOC101212813 [Cucumis sativus]
Length = 767
Score = 65.5 bits (158), Expect(2) = 1e-14
Identities = 30/67 (44%), Positives = 44/67 (65%)
Frame = -2
Query: 612 RSRVAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNG 433
RSR WT M RY+++L+L+ + RGN + N++AW M ++F KFGSQYD D L +
Sbjct: 11 RSRTYWTPVMERYFIDLMLEQLHRGNRSGHTFNKQAWTDMLTMFNTKFGSQYDKDVLKSR 70
Query: 432 FKSLRKQ 412
+ +L KQ
Sbjct: 71 YTNLWKQ 77
Score = 39.3 bits (90), Expect(2) = 1e-14
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = -3
Query: 404 IKNLLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
+KNLLGHSGF +DE +MV D +V D Y+K
Sbjct: 81 VKNLLGHSGFSWDEGRQMVIADDYVWDIYIK 111
Score = 56.2 bits (134), Expect(2) = 2e-09
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = -2
Query: 612 RSRVAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNG 433
R+R WT M RY ++LLL+ V RGN + + AW+ M + F +F + +D D L N
Sbjct: 329 RTRTYWTPPMDRYLIDLLLEQVHRGNKIGQTFVSHAWIDMVTAFNAQFRAHHDKDVLKNR 388
Query: 432 FKSLRK 415
+K LR+
Sbjct: 389 YKHLRR 394
Score = 30.8 bits (68), Expect(2) = 2e-09
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 404 IKNLLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
IK LL GF +DE E+V+ D HV D Y K
Sbjct: 399 IKILLEQRGFSWDENREIVTADDHVWDAYTK 429
Score = 51.2 bits (121), Expect(2) = 7e-07
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = -2
Query: 597 WTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNGFKSLR 418
WT M RY++ L+L + RGN + N+ AW M +LF KFG Q+ L + +K L
Sbjct: 170 WTLEMDRYFIELMLGQIGRGNKTSNTFNKHAWTDMLALFNAKFGPQHGKRVLRHRYKKLW 229
Query: 417 K 415
K
Sbjct: 230 K 230
Score = 27.3 bits (59), Expect(2) = 7e-07
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 410 SVIKNLLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
S I NLL +GF +DE+ +MV + D YVK
Sbjct: 233 SDIMNLLQQNGFCWDEVQQMVVAADDIWDAYVK 265
>emb|CBI21156.3| unnamed protein product [Vitis vinifera]
Length = 809
Score = 67.4 bits (163), Expect(2) = 2e-14
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = -2
Query: 612 RSRVAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNG 433
RSR WT +M RY+++L+LD + RG+ + + N++AW M ++F KFGSQYD D L
Sbjct: 11 RSRTYWTPTMERYFIDLMLDQMHRGSRIGHTFNKQAWTDMLTMFNAKFGSQYDKDVLKGR 70
Query: 432 FKSLRKQ 412
+ +L KQ
Sbjct: 71 YTNLWKQ 77
Score = 36.6 bits (83), Expect(2) = 2e-14
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -3
Query: 404 IKNLLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
IKNLLG SGF +DE +MV D V D Y+K
Sbjct: 81 IKNLLGQSGFSWDETRQMVVADDDVWDAYIK 111
Score = 65.1 bits (157), Expect(2) = 1e-12
Identities = 33/67 (49%), Positives = 40/67 (59%)
Frame = -2
Query: 612 RSRVAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNG 433
RSR WT M RY ++LLLD V RGN L + +AW M + F KF S +D D L N
Sbjct: 335 RSRTYWTPPMDRYLIDLLLDQVHRGNKLGQTFITQAWADMVASFNSKFRSHHDKDVLKNR 394
Query: 432 FKSLRKQ 412
FK LR+Q
Sbjct: 395 FKHLRRQ 401
Score = 33.1 bits (74), Expect(2) = 1e-12
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -3
Query: 404 IKNLLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
IK LL SGF +DE EMV+ + HV D Y K
Sbjct: 405 IKILLQQSGFSWDETREMVTAEDHVWDAYTK 435
Score = 55.8 bits (133), Expect(2) = 3e-07
Identities = 25/66 (37%), Positives = 42/66 (63%)
Frame = -2
Query: 612 RSRVAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNG 433
RSR WT +M +++++L+LD + +GN + + N++AW M +LF KFG Q+ L +
Sbjct: 175 RSRTDWTAAMDQFFIDLMLDQLGKGNKIGNTFNKQAWTDMLALFNAKFGPQHGKRVLRHR 234
Query: 432 FKSLRK 415
+K L K
Sbjct: 235 YKKLWK 240
Score = 24.3 bits (51), Expect(2) = 3e-07
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 395 LLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
LL GF +D+ EM+ D V D Y+K
Sbjct: 248 LLKQIGFSWDDEREMILADDDVWDVYIK 275
Score = 48.9 bits (115), Expect(2) = 4e-07
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = -2
Query: 603 VAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNGFKS 424
+ WT M Y+++L+++ GN + + +++AW M + F +KFG Q D FL+N +
Sbjct: 502 IDWTPPMDCYFIDLMVEQASGGNKVDEAFSEQAWAHMVTSFNDKFGLQCDKYFLENRYMF 561
Query: 423 LRKQ 412
KQ
Sbjct: 562 FMKQ 565
Score = 30.4 bits (67), Expect(2) = 4e-07
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -3
Query: 404 IKNLLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
I NLL +SGF ++E ++V+ + H+ + Y+K
Sbjct: 569 ISNLLNYSGFAWNESQQIVTAEDHIWEAYIK 599
>ref|XP_003631800.1| PREDICTED: uncharacterized protein LOC100266462 [Vitis vinifera]
Length = 771
Score = 67.4 bits (163), Expect(2) = 2e-14
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = -2
Query: 612 RSRVAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNG 433
RSR WT +M RY+++L+LD + RG+ + + N++AW M ++F KFGSQYD D L
Sbjct: 11 RSRTYWTPTMERYFIDLMLDQMHRGSRIGHTFNKQAWTDMLTMFNAKFGSQYDKDVLKGR 70
Query: 432 FKSLRKQ 412
+ +L KQ
Sbjct: 71 YTNLWKQ 77
Score = 36.6 bits (83), Expect(2) = 2e-14
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -3
Query: 404 IKNLLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
IKNLLG SGF +DE +MV D V D Y+K
Sbjct: 81 IKNLLGQSGFSWDETRQMVVADDDVWDAYIK 111
Score = 65.1 bits (157), Expect(2) = 1e-12
Identities = 33/67 (49%), Positives = 40/67 (59%)
Frame = -2
Query: 612 RSRVAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNG 433
RSR WT M RY ++LLLD V RGN L + +AW M + F KF S +D D L N
Sbjct: 335 RSRTYWTPPMDRYLIDLLLDQVHRGNKLGQTFITQAWADMVASFNSKFRSHHDKDVLKNR 394
Query: 432 FKSLRKQ 412
FK LR+Q
Sbjct: 395 FKHLRRQ 401
Score = 33.1 bits (74), Expect(2) = 1e-12
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -3
Query: 404 IKNLLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
IK LL SGF +DE EMV+ + HV D Y K
Sbjct: 405 IKILLQQSGFSWDETREMVTAEDHVWDAYTK 435
Score = 55.8 bits (133), Expect(2) = 3e-07
Identities = 25/66 (37%), Positives = 42/66 (63%)
Frame = -2
Query: 612 RSRVAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNG 433
RSR WT +M +++++L+LD + +GN + + N++AW M +LF KFG Q+ L +
Sbjct: 175 RSRTDWTAAMDQFFIDLMLDQLGKGNKIGNTFNKQAWTDMLALFNAKFGPQHGKRVLRHR 234
Query: 432 FKSLRK 415
+K L K
Sbjct: 235 YKKLWK 240
Score = 24.3 bits (51), Expect(2) = 3e-07
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 395 LLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
LL GF +D+ EM+ D V D Y+K
Sbjct: 248 LLKQIGFSWDDEREMILADDDVWDVYIK 275
Score = 48.9 bits (115), Expect(2) = 4e-07
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = -2
Query: 603 VAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNGFKS 424
+ WT M Y+++L+++ GN + + +++AW M + F +KFG Q D FL+N +
Sbjct: 502 IDWTPPMDCYFIDLMVEQASGGNKVDEAFSEQAWAHMVTSFNDKFGLQCDKYFLENRYMF 561
Query: 423 LRKQ 412
KQ
Sbjct: 562 FMKQ 565
Score = 30.4 bits (67), Expect(2) = 4e-07
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -3
Query: 404 IKNLLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
I NLL +SGF ++E ++V+ + H+ + Y+K
Sbjct: 569 ISNLLNYSGFAWNESQQIVTAEDHIWEAYIK 599
>emb|CAN79208.1| hypothetical protein VITISV_025934 [Vitis vinifera]
Length = 497
Score = 67.4 bits (163), Expect(2) = 2e-14
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = -2
Query: 612 RSRVAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNG 433
RSR WT +M RY+++L+LD + RG+ + + N++AW M ++F KFGSQYD D L
Sbjct: 11 RSRTYWTPTMERYFIDLMLDQMHRGSRIGHTFNKQAWTDMLTMFNAKFGSQYDKDVLKGR 70
Query: 432 FKSLRKQ 412
+ +L KQ
Sbjct: 71 YTNLWKQ 77
Score = 36.6 bits (83), Expect(2) = 2e-14
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -3
Query: 404 IKNLLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
IKNLLG SGF +DE +MV D V D Y+K
Sbjct: 81 IKNLLGQSGFSWDETRQMVVADDDVWDAYIK 111
Score = 65.1 bits (157), Expect(2) = 1e-12
Identities = 33/67 (49%), Positives = 40/67 (59%)
Frame = -2
Query: 612 RSRVAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNG 433
RSR WT M RY ++LLLD V RGN L + +AW M + F KF S +D D L N
Sbjct: 342 RSRTYWTPPMDRYLIDLLLDQVHRGNKLGQTFITQAWADMVASFNSKFRSHHDKDVLKNR 401
Query: 432 FKSLRKQ 412
FK LR+Q
Sbjct: 402 FKHLRRQ 408
Score = 33.1 bits (74), Expect(2) = 1e-12
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -3
Query: 404 IKNLLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
IK LL SGF +DE EMV+ + HV D Y K
Sbjct: 412 IKILLQQSGFSWDETREMVTAEDHVWDAYTK 442
Score = 55.8 bits (133), Expect(2) = 3e-07
Identities = 25/66 (37%), Positives = 42/66 (63%)
Frame = -2
Query: 612 RSRVAWTRSMIRYYVNLLLDHVRRGNMLCPSINQEAWMLMTSLFREKFGSQYDHDFLDNG 433
RSR WT +M +++++L+LD + +GN + + N++AW M +LF KFG Q+ L +
Sbjct: 182 RSRTDWTAAMDQFFIDLMLDQLGKGNKIGNTFNKQAWTDMLALFNAKFGPQHGKRVLRHR 241
Query: 432 FKSLRK 415
+K L K
Sbjct: 242 YKKLWK 247
Score = 24.3 bits (51), Expect(2) = 3e-07
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 395 LLGHSGFHFDEMLEMVSVDVHV*DNYVK 312
LL GF +D+ EM+ D V D Y+K
Sbjct: 255 LLKQIGFSWDDEREMILADDDVWDVYIK 282