BLASTX nr result

ID: Coptis23_contig00026940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026940
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238511.1| uncharacterized protein LOC100527088 [Glycin...    72   6e-11
ref|XP_003552292.1| PREDICTED: protein LURP-one-related 15-like ...    70   2e-10
ref|XP_003516997.1| PREDICTED: protein LURP-one-related 15-like ...    69   5e-10
gb|AFK46402.1| unknown [Lotus japonicus]                               68   7e-10
gb|AFK40426.1| unknown [Lotus japonicus]                               68   7e-10

>ref|NP_001238511.1| uncharacterized protein LOC100527088 [Glycine max]
           gi|255631528|gb|ACU16131.1| unknown [Glycine max]
          Length = 198

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
 Frame = +2

Query: 269 QIMSAH---RYVEGEYSTEVIVLIKDLLFSVEQSSAIQLKTQLDVFLASITKEDVSDFKI 439
           +IMSAH   +   GE STE    +KDL+FSV++SS  QLKT+LDVFLA+ TKE+V DFK+
Sbjct: 75  KIMSAHDQWQVFRGE-STE----LKDLIFSVKKSSVFQLKTKLDVFLANNTKEEVCDFKV 129

Query: 440 KGSWLER 460
           KGSW ER
Sbjct: 130 KGSWFER 136


>ref|XP_003552292.1| PREDICTED: protein LURP-one-related 15-like [Glycine max]
          Length = 216

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/67 (59%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
 Frame = +2

Query: 269 QIMSAH---RYVEGEYSTEVIVLIKDLLFSVEQSSAIQLKTQLDVFLASITKEDVSDFKI 439
           +IM+AH   +   GE STE     KDL+F++++SS IQ KT+LDVFLA+ TKEDV DFK+
Sbjct: 93  KIMTAHDRWQAFRGE-STEA----KDLIFTLKRSSLIQFKTKLDVFLANNTKEDVCDFKV 147

Query: 440 KGSWLER 460
           KGSWLER
Sbjct: 148 KGSWLER 154


>ref|XP_003516997.1| PREDICTED: protein LURP-one-related 15-like [Glycine max]
          Length = 198

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
 Frame = +2

Query: 269 QIMSAH---RYVEGEYSTEVIVLIKDLLFSVEQSSAIQLKTQLDVFLASITKEDVSDFKI 439
           ++MSAH   +   GE STE     KDL+FSV++SS  QLKT+LDVFLA+ TKE+V DFK+
Sbjct: 75  KLMSAHDRWQIFRGE-STEP----KDLIFSVKRSSFFQLKTKLDVFLANNTKEEVCDFKV 129

Query: 440 KGSWLER 460
           KGSW ER
Sbjct: 130 KGSWFER 136


>gb|AFK46402.1| unknown [Lotus japonicus]
          Length = 216

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
 Frame = +2

Query: 269 QIMSAH---RYVEGEYSTEVIVLIKDLLFSVEQSSAIQLKTQLDVFLASITKEDVSDFKI 439
           +IM+AH   +   GE STE     KDL+F++++SS IQ KT+LDVFLA+ TKEDV DFK+
Sbjct: 93  KIMTAHDRWQAYRGE-STEA----KDLIFTLKRSSLIQFKTKLDVFLATNTKEDVCDFKV 147

Query: 440 KGSWLER 460
           KGSW ER
Sbjct: 148 KGSWFER 154


>gb|AFK40426.1| unknown [Lotus japonicus]
          Length = 214

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
 Frame = +2

Query: 269 QIMSAH---RYVEGEYSTEVIVLIKDLLFSVEQSSAIQLKTQLDVFLASITKEDVSDFKI 439
           +IM+AH   +   GE STE     KDL+F++++SS IQ KT+LDVFLA+ TKEDV DFK+
Sbjct: 93  KIMTAHDRWQAYRGE-STEA----KDLIFTLKRSSLIQFKTKLDVFLATNTKEDVCDFKV 147

Query: 440 KGSWLER 460
           KGSW ER
Sbjct: 148 KGSWFER 154


Top