BLASTX nr result

ID: Coptis23_contig00026938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026938
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598182.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    91   8e-17
ref|XP_003636005.1| Helicase-like protein [Medicago truncatula] ...    89   3e-16
ref|XP_003607945.1| Helicase-like protein [Medicago truncatula] ...    89   4e-16
ref|XP_003606875.1| Helicase-like protein [Medicago truncatula] ...    89   4e-16
ref|XP_003604594.1| Helicase-like protein [Medicago truncatula] ...    89   4e-16

>ref|XP_003598182.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355487230|gb|AES68433.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 490

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 40/76 (52%), Positives = 60/76 (78%)
 Frame = -2

Query: 232 CNGTRLVVVQCKPHVLFSRILTGEK*GNETFIPRISLSPSSSDFPFHMTRRQFLVRLAYS 53
           CNGTRL+V +   HV+ ++I+TG+  GN  +IPR+S+SPS S +PF + RRQF + ++++
Sbjct: 324 CNGTRLIVTRLANHVIEAKIITGKNIGNRVYIPRMSMSPSESPWPFKLVRRQFPIVVSFA 383

Query: 52  MTINKSQGQSVKYVGI 5
           MTINKSQGQS+ +VG+
Sbjct: 384 MTINKSQGQSLDHVGL 399


>ref|XP_003636005.1| Helicase-like protein [Medicago truncatula]
            gi|355501940|gb|AES83143.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1844

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 39/76 (51%), Positives = 60/76 (78%)
 Frame = -2

Query: 232  CNGTRLVVVQCKPHVLFSRILTGEK*GNETFIPRISLSPSSSDFPFHMTRRQFLVRLAYS 53
            CNGTR++V +   HV+ ++I+ G+  GN T+IPR+ +SPS S +PF ++RRQF + ++Y+
Sbjct: 1717 CNGTRMIVTKLATHVIEAKIMGGKHHGNVTYIPRMDMSPSQSPWPFKLSRRQFPIIVSYA 1776

Query: 52   MTINKSQGQSVKYVGI 5
            MTINKSQGQS+ +VG+
Sbjct: 1777 MTINKSQGQSLDWVGL 1792


>ref|XP_003607945.1| Helicase-like protein [Medicago truncatula]
            gi|355509000|gb|AES90142.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1651

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/76 (52%), Positives = 60/76 (78%)
 Frame = -2

Query: 232  CNGTRLVVVQCKPHVLFSRILTGEK*GNETFIPRISLSPSSSDFPFHMTRRQFLVRLAYS 53
            CNGTRL+V +   HV+ ++I++G+  GN T+IPR+S+SPS S +PF + RRQF + ++Y+
Sbjct: 1523 CNGTRLIVTRMANHVIEAKIISGKNVGNLTYIPRMSMSPSQSPWPFKLIRRQFPIIVSYA 1582

Query: 52   MTINKSQGQSVKYVGI 5
            MTINKSQGQ++  VG+
Sbjct: 1583 MTINKSQGQTLDSVGL 1598


>ref|XP_003606875.1| Helicase-like protein [Medicago truncatula]
            gi|355507930|gb|AES89072.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1674

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/76 (52%), Positives = 60/76 (78%)
 Frame = -2

Query: 232  CNGTRLVVVQCKPHVLFSRILTGEK*GNETFIPRISLSPSSSDFPFHMTRRQFLVRLAYS 53
            CNGTRL+V +   HV+ ++I++G+  GN T+IPR+S+SPS S +PF + RRQF + ++Y+
Sbjct: 1546 CNGTRLIVTRMANHVIEAKIISGKNVGNLTYIPRMSMSPSQSPWPFKLIRRQFPIIVSYA 1605

Query: 52   MTINKSQGQSVKYVGI 5
            MTINKSQGQ++  VG+
Sbjct: 1606 MTINKSQGQTLDSVGL 1621


>ref|XP_003604594.1| Helicase-like protein [Medicago truncatula]
            gi|355505649|gb|AES86791.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1689

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/76 (52%), Positives = 59/76 (77%)
 Frame = -2

Query: 232  CNGTRLVVVQCKPHVLFSRILTGEK*GNETFIPRISLSPSSSDFPFHMTRRQFLVRLAYS 53
            CNGTRL++ +   HVL ++I++G   G+ T+IPR+ +SPS S +PF +TRRQF + ++Y+
Sbjct: 1562 CNGTRLIITRMANHVLEAKIMSGTNIGSMTYIPRMDMSPSQSPWPFKLTRRQFPIIVSYA 1621

Query: 52   MTINKSQGQSVKYVGI 5
            MTINKSQGQS+  VG+
Sbjct: 1622 MTINKSQGQSLDSVGL 1637


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