BLASTX nr result

ID: Coptis23_contig00026931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026931
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [...   124   1e-26
gb|ADE76890.1| unknown [Picea sitchensis]                             117   7e-25
gb|ACN26802.1| unknown [Zea mays] gi|414880258|tpg|DAA57389.1| T...   117   1e-24
ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-l...   114   6e-24
gb|EEE55472.1| hypothetical protein OsJ_03651 [Oryza sativa Japo...   112   3e-23

>ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [Vitis vinifera]
           gi|297744762|emb|CBI38024.3| unnamed protein product
           [Vitis vinifera]
          Length = 477

 Score =  124 bits (310), Expect = 1e-26
 Identities = 55/60 (91%), Positives = 58/60 (96%)
 Frame = -3

Query: 347 AGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGENFLASSDSEGTVIVWKRAKT 168
           AGSEDSNVYFYD TRP+HTCVNKLQGHGSPVIG+AWNHGEN LASSDS+GTVIVWKRAKT
Sbjct: 417 AGSEDSNVYFYDLTRPRHTCVNKLQGHGSPVIGVAWNHGENLLASSDSDGTVIVWKRAKT 476


>gb|ADE76890.1| unknown [Picea sitchensis]
          Length = 357

 Score =  117 bits (294), Expect = 7e-25
 Identities = 52/59 (88%), Positives = 55/59 (93%)
 Frame = -3

Query: 347 AGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGENFLASSDSEGTVIVWKRAK 171
           +GSEDSNVYFYD TRPKH CVNKLQGHGSPVIG+AWNHGEN LASSDS+G VIVWKRAK
Sbjct: 296 SGSEDSNVYFYDLTRPKHPCVNKLQGHGSPVIGVAWNHGENLLASSDSDGVVIVWKRAK 354


>gb|ACN26802.1| unknown [Zea mays] gi|414880258|tpg|DAA57389.1| TPA: hypothetical
           protein ZEAMMB73_253268 [Zea mays]
          Length = 468

 Score =  117 bits (293), Expect = 1e-24
 Identities = 51/59 (86%), Positives = 57/59 (96%)
 Frame = -3

Query: 344 GSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGENFLASSDSEGTVIVWKRAKT 168
           GSED+NVYFYD  RPK++CVNKLQGHGSPVIG+AWNHGENFLASSDS+GTVIVWKR+KT
Sbjct: 409 GSEDANVYFYDLARPKNSCVNKLQGHGSPVIGVAWNHGENFLASSDSDGTVIVWKRSKT 467


>ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-like [Cucumis sativus]
           gi|449519860|ref|XP_004166952.1| PREDICTED: WD
           repeat-containing protein 13-like [Cucumis sativus]
          Length = 490

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/60 (86%), Positives = 54/60 (90%)
 Frame = -3

Query: 347 AGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGENFLASSDSEGTVIVWKRAKT 168
           AGSEDSNVYFYD TRPKHTCVNKLQGH  PVIG+AWNHGEN LASSD  GTVIVWKR+KT
Sbjct: 430 AGSEDSNVYFYDLTRPKHTCVNKLQGHRFPVIGVAWNHGENLLASSDFYGTVIVWKRSKT 489


>gb|EEE55472.1| hypothetical protein OsJ_03651 [Oryza sativa Japonica Group]
          Length = 494

 Score =  112 bits (280), Expect = 3e-23
 Identities = 49/57 (85%), Positives = 55/57 (96%)
 Frame = -3

Query: 344 GSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGENFLASSDSEGTVIVWKRA 174
           GSED+NVYFYD TRPK++CVNKLQGHGSPVIG+AW+HGEN LASSDS+GTVIVWKRA
Sbjct: 438 GSEDANVYFYDLTRPKNSCVNKLQGHGSPVIGVAWSHGENLLASSDSDGTVIVWKRA 494


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