BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026927
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis...    86   1e-14
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    74   4e-11
ref|XP_002872660.1| F-box family protein [Arabidopsis lyrata sub...    72   2e-10
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...    71   3e-10

>ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449508988|ref|XP_004163461.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 179

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 45/103 (43%), Positives = 65/103 (63%)
 Frame = +1

Query: 1   GIFFNNAFHWVGTPSTAEESGSDLASNFVIAFDTMSDEFRAVVQLHPDVAEDSCCIQLEV 180
           G+F NNA HWV     +E  G  LA + V+AFD  +  F  +    P++ +  C I ++V
Sbjct: 2   GVFVNNALHWV----VSENLGMGLA-DLVVAFDLGTGRFEEIPL--PELTDFKCEIHVDV 54

Query: 181 FDGCLCLLCNFDYEDFVKFEVWVMKDYGLRKSWVKLYTVTGFD 309
             GCLCL+ N+D    V+FEVWVMK+YG+++SW+KL TV+  D
Sbjct: 55  LGGCLCLIANYDR---VRFEVWVMKEYGVQESWMKLLTVSQVD 94


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1   GIFFNNAFHWVGTP-STAEESGSDLASNFVIAFDTMSDEFRAVVQLHPDVAEDSCCIQLE 177
           G+F N+A HW  T     +E+GSDL    ++AFD  ++EF+ + Q  PD + +   + + 
Sbjct: 215 GVFANSAVHWKATVVGKGKENGSDL----IVAFDLGAEEFKIIPQ--PDYSSNEHEMNVG 268

Query: 178 VFDGCLCLLCNFDYEDFVKFEVWVMKDYGLRKSWVKLYTV 297
           V  GCLC+ CN   ++  + E+WVMK+YG+++SW  L TV
Sbjct: 269 VLGGCLCVFCN---KNCKQVEIWVMKEYGVKESWTHLCTV 305


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 40/103 (38%), Positives = 62/103 (60%)
 Frame = +1

Query: 1   GIFFNNAFHWVGTPSTAEESGSDLASNFVIAFDTMSDEFRAVVQLHPDVAEDSCCIQLEV 180
           G+F N A HWV      E   S++A N V+A D   +++R V+Q  P+  + +  I L V
Sbjct: 207 GVFANGALHWV----VGENPESNVA-NIVVALDLGVEDYREVLQ--PEYKDKNFYIDLGV 259

Query: 181 FDGCLCLLCNFDYEDFVKFEVWVMKDYGLRKSWVKLYTVTGFD 309
             GCLC L NF  E   + +VW+MK+YG+++SW KL++V  ++
Sbjct: 260 LRGCLCFLANFLGE---RVDVWMMKEYGVKESWTKLFSVAQYE 299


>ref|XP_002872660.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318497|gb|EFH48919.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
 Frame = +1

Query: 1   GIFFNNAFHWVGTPSTAEESGSDLASNFVIAFDTMSDEFRAVVQLHPDVAEDSCCIQLE- 177
           G+   N+ HWV            +A N ++ FD   +EF  +V+    VA  +  IQ++ 
Sbjct: 213 GVLAGNSLHWV-----LPRRPGLIAFNLIVRFDLALEEF-GIVRFPETVANGNVDIQMDI 266

Query: 178 -VFDGCLCLLCNFDYEDFVKFEVWVMKDYGLRKSWVKLYTV 297
            V DGCLCL+CN+D E     +VW+MK+Y +R SW K++TV
Sbjct: 267 SVLDGCLCLMCNYDQE---YVDVWMMKEYNVRSSWTKVFTV 304


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
 Frame = +1

Query: 1   GIFFNNAFHWVGTPSTAEESGSDLASNFVIAFDTMSDEFRAVVQLHPDVAEDSCCI-QLE 177
           G F +   +W    S    S        +++ D   + +R V  L PD  ++ C    L 
Sbjct: 209 GKFVSGTLNWASNYSIGSSSFWT-----IVSLDLEKETYREV--LPPDYEKEECSTPSLS 261

Query: 178 VFDGCLCLLCNFDYEDFVKFEVWVMKDYGLRKSWVKLYTVT--------GFDHPYGITNT 333
           V  GCLC+  N+DY+    F VW+MKDYG+R+SW+KL T+          +  PY I+  
Sbjct: 262 VLKGCLCM--NYDYKK-TDFVVWLMKDYGVRESWIKLLTIPYLPNPEDFSYSGPYCISEN 318

Query: 334 GN-FITHKLYSGLYDPKDGSYRDINVRG 414
           G   +  +    LYDP+D S+R   + G
Sbjct: 319 GEVLLMFEFDLILYDPRDHSFRYPRIEG 346