BLASTX nr result
ID: Coptis23_contig00026920
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00026920
(668 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275722.2| PREDICTED: uncharacterized protein LOC100264... 256 4e-66
emb|CBI21529.3| unnamed protein product [Vitis vinifera] 256 4e-66
emb|CAN62815.1| hypothetical protein VITISV_031884 [Vitis vinifera] 255 5e-66
ref|XP_002301645.1| predicted protein [Populus trichocarpa] gi|2... 247 2e-63
ref|NP_565727.2| tRNAHis guanylyltransferase [Arabidopsis thalia... 241 9e-62
>ref|XP_002275722.2| PREDICTED: uncharacterized protein LOC100264494 [Vitis vinifera]
Length = 562
Score = 256 bits (653), Expect = 4e-66
Identities = 126/228 (55%), Positives = 166/228 (72%), Gaps = 6/228 (2%)
Frame = +2
Query: 2 TCLWELVKSGKTKTEAQDILKGTRTQCRNELLFKQFDINYNTVPMMFRKGSSVFRDKVKV 181
TC W LVK GKT+ EAQ++LKGT Q +NELLF+QF INY +P MFR+GS V + +V+
Sbjct: 193 TCFWMLVKCGKTEEEAQEVLKGTHKQEKNELLFQQFGINYKNLPSMFRQGSCVCKTQVEA 252
Query: 182 VVKNRENGDPVVRLRKKVIVEHCD-IIGESFWREHPSLIAS-----EDLNMLRNVHSSNV 343
+VK ENG PV RLR+K I+ H D I SFW EHP L+ ED+N ++ + +
Sbjct: 253 IVKYSENGTPVKRLRRKPIIVHSDNIAARSFWNEHPFLLKELGDFREDINNIKPEYVKSF 312
Query: 344 YECMKNETEVKNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPSDSKALGLMNACAVAVLEK 523
+ +NKL+P TWIVVRIDG HFH+FS++H+F+KP+D +AL LMN+CAVAVLE+
Sbjct: 313 --------QFENKLMPLTWIVVRIDGCHFHRFSEVHEFEKPNDEQALNLMNSCAVAVLEQ 364
Query: 524 FTDVVIAYGVSDEYSFVFSKTSQFQQRQGSNIVSMIVSFFSSLYVLKW 667
F DV+ +YGVSDEYSFV K SQF QR+GS IV+ +VS+F+S+YV+KW
Sbjct: 365 FKDVIFSYGVSDEYSFVLKKDSQFYQRRGSEIVTALVSYFTSIYVMKW 412
Score = 134 bits (336), Expect = 2e-29
Identities = 61/112 (54%), Positives = 91/112 (81%)
Frame = +2
Query: 332 SSNVYECMKNETEVKNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPSDSKALGLMNACAVA 511
+++ YE +K+ EV+++++P IVVRIDGR F +FS++H+F+KP+D +AL LMN+CA A
Sbjct: 36 ANSKYEYVKS-FEVEDEVMPPNLIVVRIDGRGFRRFSEVHEFEKPNDERALNLMNSCAAA 94
Query: 512 VLEKFTDVVIAYGVSDEYSFVFSKTSQFQQRQGSNIVSMIVSFFSSLYVLKW 667
+LE++ D+V +YG SDEYSFVF KT++F QR+ S IVS++VSFF+S+Y KW
Sbjct: 95 MLEEYPDIVFSYGFSDEYSFVFKKTTKFYQRRASKIVSLVVSFFTSIYTTKW 146
Score = 105 bits (261), Expect = 1e-20
Identities = 51/98 (52%), Positives = 71/98 (72%)
Frame = +2
Query: 2 TCLWELVKSGKTKTEAQDILKGTRTQCRNELLFKQFDINYNTVPMMFRKGSSVFRDKVKV 181
TC W LVKSGK+K+EAQ LKGT+ + +NE+L +QF I+YNT+P+MFR+GSS F ++ +
Sbjct: 459 TCFWMLVKSGKSKSEAQAYLKGTQAREKNEVLLQQFGIDYNTLPLMFRQGSSAFWNE-EE 517
Query: 182 VVKNRENGDPVVRLRKKVIVEHCDIIGESFWREHPSLI 295
ENG + KKV+VE C+II +SFW HPS++
Sbjct: 518 KTGMYENGASAEKSGKKVVVEQCNIIEQSFWEAHPSIL 555
>emb|CBI21529.3| unnamed protein product [Vitis vinifera]
Length = 1073
Score = 256 bits (653), Expect = 4e-66
Identities = 126/228 (55%), Positives = 166/228 (72%), Gaps = 6/228 (2%)
Frame = +2
Query: 2 TCLWELVKSGKTKTEAQDILKGTRTQCRNELLFKQFDINYNTVPMMFRKGSSVFRDKVKV 181
TC W LVK GKT+ EAQ++LKGT Q +NELLF+QF INY +P MFR+GS V + +V+
Sbjct: 619 TCFWMLVKCGKTEEEAQEVLKGTHKQEKNELLFQQFGINYKNLPSMFRQGSCVCKTQVEA 678
Query: 182 VVKNRENGDPVVRLRKKVIVEHCD-IIGESFWREHPSLIAS-----EDLNMLRNVHSSNV 343
+VK ENG PV RLR+K I+ H D I SFW EHP L+ ED+N ++ + +
Sbjct: 679 IVKYSENGTPVKRLRRKPIIVHSDNIAARSFWNEHPFLLKELGDFREDINNIKPEYVKSF 738
Query: 344 YECMKNETEVKNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPSDSKALGLMNACAVAVLEK 523
+ +NKL+P TWIVVRIDG HFH+FS++H+F+KP+D +AL LMN+CAVAVLE+
Sbjct: 739 --------QFENKLMPLTWIVVRIDGCHFHRFSEVHEFEKPNDEQALNLMNSCAVAVLEQ 790
Query: 524 FTDVVIAYGVSDEYSFVFSKTSQFQQRQGSNIVSMIVSFFSSLYVLKW 667
F DV+ +YGVSDEYSFV K SQF QR+GS IV+ +VS+F+S+YV+KW
Sbjct: 791 FKDVIFSYGVSDEYSFVLKKDSQFYQRRGSEIVTALVSYFTSIYVMKW 838
Score = 134 bits (336), Expect = 2e-29
Identities = 61/112 (54%), Positives = 91/112 (81%)
Frame = +2
Query: 332 SSNVYECMKNETEVKNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPSDSKALGLMNACAVA 511
+++ YE +K+ EV+++++P IVVRIDGR F +FS++H+F+KP+D +AL LMN+CA A
Sbjct: 462 ANSKYEYVKS-FEVEDEVMPPNLIVVRIDGRGFRRFSEVHEFEKPNDERALNLMNSCAAA 520
Query: 512 VLEKFTDVVIAYGVSDEYSFVFSKTSQFQQRQGSNIVSMIVSFFSSLYVLKW 667
+LE++ D+V +YG SDEYSFVF KT++F QR+ S IVS++VSFF+S+Y KW
Sbjct: 521 MLEEYPDIVFSYGFSDEYSFVFKKTTKFYQRRASKIVSLVVSFFTSIYTTKW 572
Score = 105 bits (262), Expect = 8e-21
Identities = 54/117 (46%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
Frame = +2
Query: 2 TCLWELVKSGKTKTEAQDILKGTRTQCRNELLFKQFDINYNTVPMMFRKGSSVFRDKVKV 181
TC W LVKSGK+K+EAQ LKGT+ + +NE+L +QF I+YNT+P+MFR+GSS F ++ +
Sbjct: 885 TCFWMLVKSGKSKSEAQAYLKGTQAREKNEVLLQQFGIDYNTLPLMFRQGSSAFWNE-EE 943
Query: 182 VVKNRENGDPVVRLRKKVIVEHCDIIGESFWREHPSLIASE-DLNMLRNVHSSNVYE 349
ENG + KKV+VE C+II +SFW HPS++ + + LR+ +S + +
Sbjct: 944 KTGMYENGASAEKSGKKVVVEQCNIIEQSFWEAHPSILNEKPHMPQLRSSGTSTIVQ 1000
>emb|CAN62815.1| hypothetical protein VITISV_031884 [Vitis vinifera]
Length = 530
Score = 255 bits (652), Expect = 5e-66
Identities = 126/228 (55%), Positives = 166/228 (72%), Gaps = 6/228 (2%)
Frame = +2
Query: 2 TCLWELVKSGKTKTEAQDILKGTRTQCRNELLFKQFDINYNTVPMMFRKGSSVFRDKVKV 181
TC W LVK GKT+ EAQ++LKGT Q +NELLF+QF INY +P MFR+GS V + +V+
Sbjct: 159 TCFWMLVKCGKTEEEAQEVLKGTHKQEKNELLFQQFGINYKNLPSMFRQGSCVCKTQVEX 218
Query: 182 VVKNRENGDPVVRLRKKVIVEHCD-IIGESFWREHPSLIAS-----EDLNMLRNVHSSNV 343
+VK ENG PV RLR+K I+ H D I SFW EHP L+ ED+N ++ + +
Sbjct: 219 IVKYSENGTPVKRLRRKPIIVHSDNIAARSFWNEHPFLLKELGDFREDINNIKPEYVKSF 278
Query: 344 YECMKNETEVKNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPSDSKALGLMNACAVAVLEK 523
+ +NKL+P TWIVVRIDG HFH+FS++H+F+KP+D +AL LMN+CAVAVLE+
Sbjct: 279 --------QFENKLMPLTWIVVRIDGCHFHRFSEVHEFEKPNDEQALNLMNSCAVAVLEQ 330
Query: 524 FTDVVIAYGVSDEYSFVFSKTSQFQQRQGSNIVSMIVSFFSSLYVLKW 667
F DV+ +YGVSDEYSFV K SQF QR+GS IV+ +VS+F+S+YV+KW
Sbjct: 331 FKDVIFSYGVSDEYSFVLKKDSQFYQRRGSEIVTALVSYFTSIYVMKW 378
Score = 134 bits (336), Expect = 2e-29
Identities = 61/112 (54%), Positives = 91/112 (81%)
Frame = +2
Query: 332 SSNVYECMKNETEVKNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPSDSKALGLMNACAVA 511
+++ YE +K+ EV+++++P IVVRIDGR F +FS++H+F+KP+D +AL LMN+CA A
Sbjct: 2 ANSKYEYVKS-FEVEDEVMPPNLIVVRIDGRGFRRFSEVHEFEKPNDERALNLMNSCAAA 60
Query: 512 VLEKFTDVVIAYGVSDEYSFVFSKTSQFQQRQGSNIVSMIVSFFSSLYVLKW 667
+LE++ D+V +YG SDEYSFVF KT++F QR+ S IVS++VSFF+S+Y KW
Sbjct: 61 MLEEYPDIVFSYGFSDEYSFVFKKTTKFYQRRASKIVSLVVSFFTSIYTTKW 112
Score = 77.8 bits (190), Expect = 2e-12
Identities = 36/60 (60%), Positives = 49/60 (81%)
Frame = +2
Query: 2 TCLWELVKSGKTKTEAQDILKGTRTQCRNELLFKQFDINYNTVPMMFRKGSSVFRDKVKV 181
TC W LVKSGK+K+EAQ LKGT+ + +NE+L +QF I+YNT+P+MFR+GSS F ++V V
Sbjct: 425 TCFWMLVKSGKSKSEAQAYLKGTQAREKNEVLLQQFGIDYNTLPLMFRQGSSAFWNEVIV 484
>ref|XP_002301645.1| predicted protein [Populus trichocarpa] gi|222843371|gb|EEE80918.1|
predicted protein [Populus trichocarpa]
Length = 482
Score = 247 bits (630), Expect = 2e-63
Identities = 125/228 (54%), Positives = 166/228 (72%), Gaps = 6/228 (2%)
Frame = +2
Query: 2 TCLWELVKSGKTKTEAQDILKGTRTQCRNELLFKQFDINYNTVPMMFRKGSSVFRDKVKV 181
TCLWELVKSGKT+ EA +ILKGT+ Q RNELLF+ F INY T+P MFR+GS V R +V+
Sbjct: 159 TCLWELVKSGKTEKEALEILKGTQKQERNELLFQHFGINYRTLPQMFRQGSCVLRTEVED 218
Query: 182 VVKNRENGDPVVRLRK-KVIVEHCDIIGESFWREHPSLIA-----SEDLNMLRNVHSSNV 343
+VK ENG P+ R+R+ K V +I G SFW EH SL+ ++D+ + + + +
Sbjct: 219 IVKYSENGTPIKRMRRDKTTVHSKNIAGRSFWNEHQSLLKELGGFTKDVGKINSDYIRSF 278
Query: 344 YECMKNETEVKNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPSDSKALGLMNACAVAVLEK 523
++KL+ TWIV+RIDG HFH+FS++HDF+KP+D +AL LMN+CAVAVL++
Sbjct: 279 L--------FESKLMASTWIVIRIDGCHFHRFSEVHDFEKPNDEQALNLMNSCAVAVLQE 330
Query: 524 FTDVVIAYGVSDEYSFVFSKTSQFQQRQGSNIVSMIVSFFSSLYVLKW 667
F DVV +YGVSDEYSFV K SQF QR+ SNIVS++VSFF+S+YV+ W
Sbjct: 331 FADVVFSYGVSDEYSFVLKKDSQFCQRKASNIVSIMVSFFTSMYVMNW 378
Score = 122 bits (305), Expect = 8e-26
Identities = 57/112 (50%), Positives = 88/112 (78%)
Frame = +2
Query: 332 SSNVYECMKNETEVKNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPSDSKALGLMNACAVA 511
+++ YE +K+ EV+++++ IVVRI RHF +FS++H+F+KP+D KAL LM+ CA
Sbjct: 2 ANSKYEYVKS-FEVEDEIMFPNLIVVRIGDRHFQRFSEVHEFEKPNDEKALKLMSLCATL 60
Query: 512 VLEKFTDVVIAYGVSDEYSFVFSKTSQFQQRQGSNIVSMIVSFFSSLYVLKW 667
VL+++ D+V ++G SDEYSFVF +T++F QR+ S +VS+IVSFF+S+YV KW
Sbjct: 61 VLQEYPDIVFSFGFSDEYSFVFKQTTKFYQRRASKVVSIIVSFFTSVYVTKW 112
Score = 64.7 bits (156), Expect = 2e-08
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = +2
Query: 2 TCLWELVKSGKTKTEAQDILKGTRTQCRNELLFKQFDINYNTVPMMFRKGSSVFR 166
TC W LVKSGK+K+EAQ LKGT+ Q + E+L +YN +P+MFR+GSSVFR
Sbjct: 425 TCFWMLVKSGKSKSEAQRTLKGTQAQEKKEMLAWFGIDDYNALPVMFRQGSSVFR 479
>ref|NP_565727.2| tRNAHis guanylyltransferase [Arabidopsis thaliana]
gi|426021251|sp|F4IRQ5.1|THG1_ARATH RecName:
Full=tRNA(His) guanylyltransferase 1
gi|330253469|gb|AEC08563.1| tRNAHis guanylyltransferase
[Arabidopsis thaliana]
Length = 567
Score = 241 bits (615), Expect = 9e-62
Identities = 121/223 (54%), Positives = 158/223 (70%), Gaps = 1/223 (0%)
Frame = +2
Query: 2 TCLWELVKSGKTKTEAQDILKGTRTQCRNELLFKQFDINYNTVPMMFRKGSSVFRDKVKV 181
TC W LVKSGK+ +E Q+ILK T+ Q +NELLF++F INY T+P +FR+GS +F+ KV+
Sbjct: 206 TCFWMLVKSGKSVSETQEILKDTQKQQKNELLFQKFGINYKTLPELFRQGSCLFKKKVEE 265
Query: 182 VVKNRENGDPVVRLRKKVIVEHCD-IIGESFWREHPSLIASEDLNMLRNVHSSNVYECMK 358
VK+ ENG+PV RLR+K + H + I G SFW E PSL DL +
Sbjct: 266 TVKHDENGNPVKRLRRKAVFVHSENIAGRSFWNEQPSLY--NDLGHFTK-DIGKIEPDFI 322
Query: 359 NETEVKNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPSDSKALGLMNACAVAVLEKFTDVV 538
+ +NKLLP TW+VVRIDG HFH+FSD+H+F+KP+D +AL LMN+CAVAVLE+F D+
Sbjct: 323 RSFQFENKLLPLTWVVVRIDGCHFHRFSDVHEFEKPNDEQALKLMNSCAVAVLEEFEDIH 382
Query: 539 IAYGVSDEYSFVFSKTSQFQQRQGSNIVSMIVSFFSSLYVLKW 667
AYGVSDEYSFV K S+ +RQ S I+S + SFF+S YVL+W
Sbjct: 383 FAYGVSDEYSFVLKKESELYKRQSSKIISAVASFFTSTYVLQW 425
Score = 126 bits (317), Expect = 3e-27
Identities = 61/117 (52%), Positives = 91/117 (77%)
Frame = +2
Query: 317 LRNVHSSNVYECMKNETEVKNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPSDSKALGLMN 496
LR++ +S YE +K+ E++++++ +VVRIDGR F +FS +H+F+KP+D AL LMN
Sbjct: 45 LRDMANSK-YEYVKS-FELEDEVMLPNLMVVRIDGRDFSRFSQVHEFEKPNDETALNLMN 102
Query: 497 ACAVAVLEKFTDVVIAYGVSDEYSFVFSKTSQFQQRQGSNIVSMIVSFFSSLYVLKW 667
+C+ AVLE+F D++ AYG SDEYSFVF KTS+F QR+ S I+S++ SFF+++YV KW
Sbjct: 103 SCSAAVLEEFPDIIFAYGYSDEYSFVFKKTSRFYQRRASKILSLVASFFAAVYVTKW 159
Score = 102 bits (253), Expect = 9e-20
Identities = 53/102 (51%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
Frame = +2
Query: 2 TCLWELVKSGKTKTEAQDILKGTRTQCRNELLFKQFDINYNTVPMMFRKGSSVFRDKVKV 181
TC W LVKSGK KT++QD LKGT+T+ +NELL +QF I YN++P++FR GSSVFR
Sbjct: 472 TCFWMLVKSGKNKTQSQDYLKGTQTREKNELLSRQFGIEYNSLPVIFRMGSSVFR----- 526
Query: 182 VVKNRENGDPVV---RLRKKVIVEHCDIIGESFWREHPSLIA 298
+K ENG VV +L +V+V+HC+II FW EH +++
Sbjct: 527 -LKEAENG--VVSGKKLEGEVVVDHCNIIERCFWEEHLHILS 565