BLASTX nr result

ID: Coptis23_contig00026919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026919
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22919.3| unnamed protein product [Vitis vinifera]              168   5e-40
emb|CAN64499.1| hypothetical protein VITISV_043672 [Vitis vinifera]   168   5e-40
ref|XP_002314925.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
emb|CBI39573.3| unnamed protein product [Vitis vinifera]              131   7e-29
ref|XP_002278233.1| PREDICTED: uncharacterized protein LOC100264...   131   7e-29

>emb|CBI22919.3| unnamed protein product [Vitis vinifera]
          Length = 848

 Score =  168 bits (425), Expect = 5e-40
 Identities = 84/158 (53%), Positives = 109/158 (68%)
 Frame = -1

Query: 507 PTTPSVSGVLRQNNQKQNCSTNRDKLPTKSVASNQQGRKALSSEASFGHNKPSIKVVGNS 328
           P+TP+  GVLRQNNQKQNC  ++DKLP+KS  S  Q RK LS E+S G +K S KV GNS
Sbjct: 349 PSTPNAPGVLRQNNQKQNCMVDKDKLPSKSFVSTSQSRKPLSGESSLGRHKTSSKVSGNS 408

Query: 327 KVGVRRSGLDTSDTEKVVASQSRTKNCPRKKRAIEGNSYRERSGFGDTLLVNEGDKPLQP 148
           K G R+ GL+ +D+EK V S S TKN PRKKR+I G+   E +   D  L+++ +K  Q 
Sbjct: 409 KAGSRKLGLEPTDSEKEV-SYSSTKNFPRKKRSINGDFNLENNWVADNFLIDKNEKAFQS 467

Query: 147 NATIEGHSRWMDDSRRKGMDVVSFTFTSPMKKPVTGSQ 34
           N   E H  W +DSR+KGMDVVSFTFT+P+ + + GS+
Sbjct: 468 NTVKERHFSWAEDSRKKGMDVVSFTFTAPLTRSIPGSE 505


>emb|CAN64499.1| hypothetical protein VITISV_043672 [Vitis vinifera]
          Length = 955

 Score =  168 bits (425), Expect = 5e-40
 Identities = 84/158 (53%), Positives = 109/158 (68%)
 Frame = -1

Query: 507 PTTPSVSGVLRQNNQKQNCSTNRDKLPTKSVASNQQGRKALSSEASFGHNKPSIKVVGNS 328
           P+TP+  GVLRQNNQKQNC  ++DKLP+KS  S  Q RK LS E+S G +K S KV GNS
Sbjct: 395 PSTPNAPGVLRQNNQKQNCMVDKDKLPSKSFVSTSQSRKPLSGESSLGRHKTSSKVSGNS 454

Query: 327 KVGVRRSGLDTSDTEKVVASQSRTKNCPRKKRAIEGNSYRERSGFGDTLLVNEGDKPLQP 148
           K G R+ GL+ +D+EK V S S TKN PRKKR+I G+   E +   D  L+++ +K  Q 
Sbjct: 455 KAGSRKLGLEPTDSEKEV-SYSSTKNFPRKKRSINGDFNLENNWVADNFLIDKNEKAFQS 513

Query: 147 NATIEGHSRWMDDSRRKGMDVVSFTFTSPMKKPVTGSQ 34
           N   E H  W +DSR+KGMDVVSFTFT+P+ + + GS+
Sbjct: 514 NTVKERHFSWAEDSRKKGMDVVSFTFTAPLTRSIPGSE 551


>ref|XP_002314925.1| predicted protein [Populus trichocarpa] gi|222863965|gb|EEF01096.1|
           predicted protein [Populus trichocarpa]
          Length = 933

 Score =  134 bits (338), Expect = 6e-30
 Identities = 71/160 (44%), Positives = 105/160 (65%)
 Frame = -1

Query: 489 SGVLRQNNQKQNCSTNRDKLPTKSVASNQQGRKALSSEASFGHNKPSIKVVGNSKVGVRR 310
           SG LRQNNQKQNC  ++DKLP+K + SN QG+K LS      H K   K  G SK G R+
Sbjct: 400 SGALRQNNQKQNCMMDKDKLPSKPLVSNLQGKKVLSGNPPARH-KTFCKTFG-SKNGSRK 457

Query: 309 SGLDTSDTEKVVASQSRTKNCPRKKRAIEGNSYRERSGFGDTLLVNEGDKPLQPNATIEG 130
              D+ + EK  ++ S T++ PRKKR+I+GN + E++   D LL++   K ++ N  I+ 
Sbjct: 458 LASDSREVEKGTSNYS-TRSNPRKKRSIDGNLHLEKNQVADKLLIDRNRKAVETNPVIDR 516

Query: 129 HSRWMDDSRRKGMDVVSFTFTSPMKKPVTGSQVSVPVLEK 10
           H  W+++S+RKGMDVVSFTFT+P+ + + GS+    V+++
Sbjct: 517 HFSWVEESKRKGMDVVSFTFTAPLTRSMPGSETPTRVVQE 556


>emb|CBI39573.3| unnamed protein product [Vitis vinifera]
          Length = 901

 Score =  131 bits (329), Expect = 7e-29
 Identities = 75/164 (45%), Positives = 103/164 (62%)
 Frame = -1

Query: 504 TTPSVSGVLRQNNQKQNCSTNRDKLPTKSVASNQQGRKALSSEASFGHNKPSIKVVGNSK 325
           +T   S  L+QNNQKQN  + RD L +K+  SNQ+ +KA S   SFG +K   KVV N++
Sbjct: 339 STNRTSNALKQNNQKQNGGSTRDVLTSKTAVSNQKSKKAPSVNGSFGPSKTVNKVVINTE 398

Query: 324 VGVRRSGLDTSDTEKVVASQSRTKNCPRKKRAIEGNSYRERSGFGDTLLVNEGDKPLQPN 145
            G ++ G   +D  K  +S S+TKN  RKK +++GN   E S   D +L N+  K ++ N
Sbjct: 399 AGSKKMGSVANDIRKE-SSLSKTKNASRKKLSVDGNICFEGS-IADGVLTNKDVKSIKCN 456

Query: 144 ATIEGHSRWMDDSRRKGMDVVSFTFTSPMKKPVTGSQVSVPVLE 13
             +EG + W  D+ +KGMDVVSFTFTSPMKKP+ GS  S  V+E
Sbjct: 457 VAVEGGTDWGGDNIKKGMDVVSFTFTSPMKKPIPGSMSSDQVME 500


>ref|XP_002278233.1| PREDICTED: uncharacterized protein LOC100264914 [Vitis vinifera]
          Length = 919

 Score =  131 bits (329), Expect = 7e-29
 Identities = 75/164 (45%), Positives = 103/164 (62%)
 Frame = -1

Query: 504 TTPSVSGVLRQNNQKQNCSTNRDKLPTKSVASNQQGRKALSSEASFGHNKPSIKVVGNSK 325
           +T   S  L+QNNQKQN  + RD L +K+  SNQ+ +KA S   SFG +K   KVV N++
Sbjct: 357 STNRTSNALKQNNQKQNGGSTRDVLTSKTAVSNQKSKKAPSVNGSFGPSKTVNKVVINTE 416

Query: 324 VGVRRSGLDTSDTEKVVASQSRTKNCPRKKRAIEGNSYRERSGFGDTLLVNEGDKPLQPN 145
            G ++ G   +D  K  +S S+TKN  RKK +++GN   E S   D +L N+  K ++ N
Sbjct: 417 AGSKKMGSVANDIRKE-SSLSKTKNASRKKLSVDGNICFEGS-IADGVLTNKDVKSIKCN 474

Query: 144 ATIEGHSRWMDDSRRKGMDVVSFTFTSPMKKPVTGSQVSVPVLE 13
             +EG + W  D+ +KGMDVVSFTFTSPMKKP+ GS  S  V+E
Sbjct: 475 VAVEGGTDWGGDNIKKGMDVVSFTFTSPMKKPIPGSMSSDQVME 518


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