BLASTX nr result

ID: Coptis23_contig00026918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026918
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550904.1| PREDICTED: uncharacterized protein LOC100794...    63   3e-08
ref|NP_001190749.1| uncharacterized protein [Arabidopsis thalian...    63   3e-08
emb|CAB10506.1| hypothetical protein [Arabidopsis thaliana] gi|7...    63   3e-08
ref|NP_567526.4| uncharacterized protein [Arabidopsis thaliana] ...    63   3e-08
ref|XP_002870114.1| hypothetical protein ARALYDRAFT_493150 [Arab...    61   1e-07

>ref|XP_003550904.1| PREDICTED: uncharacterized protein LOC100794740 [Glycine max]
          Length = 760

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
 Frame = +3

Query: 3   FIVEHAIILFFMVAXXXXXXXXXXXXNVYKGSANDR---NRDLIRKG------EGSML-- 149
           F VEHA+I+  M+                K     +   N + +++G      EG+ +  
Sbjct: 148 FWVEHAVIMLIMLILLMTMASSAISLPKMKHYFELKYKMNEEALKEGSKLLGEEGNQMVN 207

Query: 150 ----QRLKICFLYAYQSSPQFIACKIPFHDVVSMICMICSMVLIEVLLRTFAFK-NLDFC 314
               Q +KI ++ A+ SSPQF+  +          C++ ++ L+E +LR++    + DFC
Sbjct: 208 RLRDQLMKI-WMMAHTSSPQFVLGRSVTGTASGAFCLLSTLTLVEAMLRSYLMPWSFDFC 266

Query: 315 DGVSDYGWSMWIVVVTQIVTIFLITVAIGCRWLLFVQYWVEN 440
            G +DY WS+ ++++ Q+  + + T+A   RW + + Y   N
Sbjct: 267 TGDTDYKWSIILILIVQVAAVVVGTIAPAFRWFIAITYKCPN 308


>ref|NP_001190749.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332658470|gb|AEE83870.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 647

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
 Frame = +3

Query: 126 RKGEGSMLQRLKICFLYAYQSSPQFIACKIPFHDVVSMICMICSMVLIEVLLRTFAF--K 299
           R+G   + + L   ++ A+ SSPQF+  +         +C + ++ L E ++R++    +
Sbjct: 199 RRGVPKLKEDLMKFWMMAHTSSPQFVMARSVTCTTTGFLCFLIAITLAEAMVRSYFLQPR 258

Query: 300 NLDFCDGVSDYGWSMWIVVVTQIVTIFLITVAIGCRWLLFVQY 428
           +L FC+G SDY WS  +V+V+Q   + + TVA   RWL  V +
Sbjct: 259 SLGFCNGDSDYKWSTTLVLVSQTAAVAIGTVAPASRWLKAVNF 301


>emb|CAB10506.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268477|emb|CAB78728.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 605

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
 Frame = +3

Query: 126 RKGEGSMLQRLKICFLYAYQSSPQFIACKIPFHDVVSMICMICSMVLIEVLLRTFAF--K 299
           R+G   + + L   ++ A+ SSPQF+  +         +C + ++ L E ++R++    +
Sbjct: 199 RRGVPKLKEDLMKFWMMAHTSSPQFVMARSVTCTTTGFLCFLIAITLAEAMVRSYFLQPR 258

Query: 300 NLDFCDGVSDYGWSMWIVVVTQIVTIFLITVAIGCRWLLFVQY 428
           +L FC+G SDY WS  +V+V+Q   + + TVA   RWL  V +
Sbjct: 259 SLGFCNGDSDYKWSTTLVLVSQTAAVAIGTVAPASRWLKAVNF 301


>ref|NP_567526.4| uncharacterized protein [Arabidopsis thaliana]
           gi|16323155|gb|AAL15312.1| AT4g17250/dl4660w
           [Arabidopsis thaliana] gi|23506021|gb|AAN28870.1|
           At4g17250/dl4660w [Arabidopsis thaliana]
           gi|332658469|gb|AEE83869.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 741

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
 Frame = +3

Query: 126 RKGEGSMLQRLKICFLYAYQSSPQFIACKIPFHDVVSMICMICSMVLIEVLLRTFAF--K 299
           R+G   + + L   ++ A+ SSPQF+  +         +C + ++ L E ++R++    +
Sbjct: 199 RRGVPKLKEDLMKFWMMAHTSSPQFVMARSVTCTTTGFLCFLIAITLAEAMVRSYFLQPR 258

Query: 300 NLDFCDGVSDYGWSMWIVVVTQIVTIFLITVAIGCRWLLFVQY 428
           +L FC+G SDY WS  +V+V+Q   + + TVA   RWL  V +
Sbjct: 259 SLGFCNGDSDYKWSTTLVLVSQTAAVAIGTVAPASRWLKAVNF 301


>ref|XP_002870114.1| hypothetical protein ARALYDRAFT_493150 [Arabidopsis lyrata subsp.
           lyrata] gi|297315950|gb|EFH46373.1| hypothetical protein
           ARALYDRAFT_493150 [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
 Frame = +3

Query: 126 RKGEGSMLQRLKICFLYAYQSSPQFIACKIPFHDVVSMICMICSMVLIEVLLRTFAF--K 299
           R+G   + + L   ++ A+ SSPQF+  +         +C + ++ L E ++R++    +
Sbjct: 199 RRGVPKLKEDLMKFWMMAHTSSPQFVMARSVTCTTSGFLCFLSAITLAEAMVRSYFLQTR 258

Query: 300 NLDFCDGVSDYGWSMWIVVVTQIVTIFLITVAIGCRWL 413
           +L FC+G SDY WS  +V+V+Q   + + TVA   RWL
Sbjct: 259 SLGFCNGDSDYKWSTALVLVSQTAAVAIGTVAPASRWL 296


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