BLASTX nr result

ID: Coptis23_contig00026902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026902
         (1104 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314115.1| predicted protein [Populus trichocarpa] gi|2...   352   9e-95
ref|XP_004166283.1| PREDICTED: LOW QUALITY PROTEIN: GDP-mannose ...   350   5e-94
ref|XP_003552965.1| PREDICTED: GDP-mannose transporter GONST2-li...   350   5e-94
ref|XP_002279549.2| PREDICTED: GDP-mannose transporter GONST2-li...   348   1e-93
emb|CBI15984.3| unnamed protein product [Vitis vinifera]              348   1e-93

>ref|XP_002314115.1| predicted protein [Populus trichocarpa] gi|222850523|gb|EEE88070.1|
            predicted protein [Populus trichocarpa]
          Length = 316

 Score =  352 bits (903), Expect = 9e-95
 Identities = 171/209 (81%), Positives = 192/209 (91%)
 Frame = -3

Query: 1102 NIAMVTVLKNMTNIITAIGELYIFKKHQSQKVWTAMLFMIISAVSGGITDLSFDAVGYSW 923
            NIAMVT+LKN+TNIITAIGELYIF+KHQ+QKVWTAM  MIISA+SGGITDLSFD++GY+W
Sbjct: 108  NIAMVTILKNVTNIITAIGELYIFRKHQNQKVWTAMFLMIISAISGGITDLSFDSMGYTW 167

Query: 922  QIMNCILTASYSLTLRRVMDKAKQLTRSGSLNEVSMVLLNNALSLPFATFLILLFGEWEY 743
            QIMNCILTA YSLTLR+VMD AKQLTRSGSLNE+SMVLLNN LSLPF   LILLF EWEY
Sbjct: 168  QIMNCILTACYSLTLRKVMDTAKQLTRSGSLNEISMVLLNNLLSLPFGIILILLFDEWEY 227

Query: 742  VYNVDVIRMPLFWVVATASGLLGLAISFTSMWFLNQTGPTTYSLVGSLNKIPISIAGLLL 563
            +   DVI++P+FWVVATASGLLGLAISFTS+WFL+QTGPTTYSLVGSLNKIP+S AGL+L
Sbjct: 228  IITTDVIKLPMFWVVATASGLLGLAISFTSLWFLHQTGPTTYSLVGSLNKIPLSFAGLVL 287

Query: 562  FNVPVSSPNLFSILFGLFAGVLFARAKMT 476
            F VP+S PNLFSI FGLFAG+ FARAKM+
Sbjct: 288  FKVPLSLPNLFSIFFGLFAGIFFARAKMS 316


>ref|XP_004166283.1| PREDICTED: LOW QUALITY PROTEIN: GDP-mannose transporter GONST2-like
            [Cucumis sativus]
          Length = 413

 Score =  350 bits (897), Expect = 5e-94
 Identities = 169/209 (80%), Positives = 191/209 (91%)
 Frame = -3

Query: 1102 NIAMVTVLKNMTNIITAIGELYIFKKHQSQKVWTAMLFMIISAVSGGITDLSFDAVGYSW 923
            NIAMVT+LKN+TNI+TAIGE+YIF+K Q+QKVWTAM  MIISA+SGG+TDL+FD +GY W
Sbjct: 200  NIAMVTILKNVTNILTAIGEVYIFRKRQNQKVWTAMFLMIISAISGGVTDLTFDTLGYGW 259

Query: 922  QIMNCILTASYSLTLRRVMDKAKQLTRSGSLNEVSMVLLNNALSLPFATFLILLFGEWEY 743
            QI NC+LTASYSLTLRR+MD+AK+LTRSGSLNE SMVLLNN LSLPF   LI+LFGEW Y
Sbjct: 260  QITNCVLTASYSLTLRRIMDEAKKLTRSGSLNEASMVLLNNLLSLPFGVVLIILFGEWAY 319

Query: 742  VYNVDVIRMPLFWVVATASGLLGLAISFTSMWFLNQTGPTTYSLVGSLNKIPISIAGLLL 563
            V N DVI++P FWV+ATASGLLGLAISFTSMWFL+QTGPTTYSLVGSLNKIPISIAG+LL
Sbjct: 320  VMNADVIKLPTFWVIATASGLLGLAISFTSMWFLHQTGPTTYSLVGSLNKIPISIAGILL 379

Query: 562  FNVPVSSPNLFSILFGLFAGVLFARAKMT 476
            F VP+S PNLFSILFGLFAGV FARAKM+
Sbjct: 380  FKVPLSPPNLFSILFGLFAGVFFARAKMS 408


>ref|XP_003552965.1| PREDICTED: GDP-mannose transporter GONST2-like [Glycine max]
          Length = 490

 Score =  350 bits (897), Expect = 5e-94
 Identities = 171/209 (81%), Positives = 194/209 (92%)
 Frame = -3

Query: 1102 NIAMVTVLKNMTNIITAIGELYIFKKHQSQKVWTAMLFMIISAVSGGITDLSFDAVGYSW 923
            N+AMVT+LKNMTNI+TAIGELY+F+K QS KVWTAM  MIISAVSGGITDLSFDAVGY+W
Sbjct: 282  NVAMVTILKNMTNILTAIGELYLFRKRQSPKVWTAMFMMIISAVSGGITDLSFDAVGYTW 341

Query: 922  QIMNCILTASYSLTLRRVMDKAKQLTRSGSLNEVSMVLLNNALSLPFATFLILLFGEWEY 743
            QI+NC+LTASYSLTLRRVMD+AK  T+SGSLNEVSMVLLNN+LSLPFA  LI LFGEW+Y
Sbjct: 342  QIINCVLTASYSLTLRRVMDEAKNATKSGSLNEVSMVLLNNSLSLPFAIILIFLFGEWDY 401

Query: 742  VYNVDVIRMPLFWVVATASGLLGLAISFTSMWFLNQTGPTTYSLVGSLNKIPISIAGLLL 563
            V + DV+++P+FWVVATASGLLGL+ISFTSMWFL+QT PTTYSLVGSLNKIPISIAG+L+
Sbjct: 402  VIHADVVKLPIFWVVATASGLLGLSISFTSMWFLHQTSPTTYSLVGSLNKIPISIAGILV 461

Query: 562  FNVPVSSPNLFSILFGLFAGVLFARAKMT 476
            F VP+S  NLFSILFGLFAGVLFARAKM+
Sbjct: 462  FKVPLSVSNLFSILFGLFAGVLFARAKMS 490


>ref|XP_002279549.2| PREDICTED: GDP-mannose transporter GONST2-like [Vitis vinifera]
          Length = 398

 Score =  348 bits (894), Expect = 1e-93
 Identities = 170/208 (81%), Positives = 189/208 (90%)
 Frame = -3

Query: 1102 NIAMVTVLKNMTNIITAIGELYIFKKHQSQKVWTAMLFMIISAVSGGITDLSFDAVGYSW 923
            NIAMVT+LKN+TNI+TAIGE YIF KHQ+QKVWTAM  MIISA+SGGITDLSF+  GY W
Sbjct: 191  NIAMVTILKNVTNILTAIGEYYIFHKHQNQKVWTAMFLMIISAISGGITDLSFNLKGYVW 250

Query: 922  QIMNCILTASYSLTLRRVMDKAKQLTRSGSLNEVSMVLLNNALSLPFATFLILLFGEWEY 743
            QI+NC+LTASYSLTLR VMDKAKQLTRSGSLNEVSMVLLNN LSLPF+  LI LFGEWEY
Sbjct: 251  QILNCVLTASYSLTLRLVMDKAKQLTRSGSLNEVSMVLLNNLLSLPFSILLIFLFGEWEY 310

Query: 742  VYNVDVIRMPLFWVVATASGLLGLAISFTSMWFLNQTGPTTYSLVGSLNKIPISIAGLLL 563
            V NVDV+R+P+FWV+AT SGL GL+ISFTSMWFLNQTGPTTYSLVGSLNKIPIS+AG++L
Sbjct: 311  VINVDVVRIPMFWVLATTSGLTGLSISFTSMWFLNQTGPTTYSLVGSLNKIPISLAGIVL 370

Query: 562  FNVPVSSPNLFSILFGLFAGVLFARAKM 479
            FNVP+S PN FSILFGLFAGV F +AKM
Sbjct: 371  FNVPLSLPNFFSILFGLFAGVFFVKAKM 398


>emb|CBI15984.3| unnamed protein product [Vitis vinifera]
          Length = 396

 Score =  348 bits (894), Expect = 1e-93
 Identities = 170/208 (81%), Positives = 189/208 (90%)
 Frame = -3

Query: 1102 NIAMVTVLKNMTNIITAIGELYIFKKHQSQKVWTAMLFMIISAVSGGITDLSFDAVGYSW 923
            NIAMVT+LKN+TNI+TAIGE YIF KHQ+QKVWTAM  MIISA+SGGITDLSF+  GY W
Sbjct: 189  NIAMVTILKNVTNILTAIGEYYIFHKHQNQKVWTAMFLMIISAISGGITDLSFNLKGYVW 248

Query: 922  QIMNCILTASYSLTLRRVMDKAKQLTRSGSLNEVSMVLLNNALSLPFATFLILLFGEWEY 743
            QI+NC+LTASYSLTLR VMDKAKQLTRSGSLNEVSMVLLNN LSLPF+  LI LFGEWEY
Sbjct: 249  QILNCVLTASYSLTLRLVMDKAKQLTRSGSLNEVSMVLLNNLLSLPFSILLIFLFGEWEY 308

Query: 742  VYNVDVIRMPLFWVVATASGLLGLAISFTSMWFLNQTGPTTYSLVGSLNKIPISIAGLLL 563
            V NVDV+R+P+FWV+AT SGL GL+ISFTSMWFLNQTGPTTYSLVGSLNKIPIS+AG++L
Sbjct: 309  VINVDVVRIPMFWVLATTSGLTGLSISFTSMWFLNQTGPTTYSLVGSLNKIPISLAGIVL 368

Query: 562  FNVPVSSPNLFSILFGLFAGVLFARAKM 479
            FNVP+S PN FSILFGLFAGV F +AKM
Sbjct: 369  FNVPLSLPNFFSILFGLFAGVFFVKAKM 396


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