BLASTX nr result

ID: Coptis23_contig00026899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026899
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD22703.1| putative TNP2-like transposon protein [Arabidopsi...   167   1e-39
gb|AAC97237.1| putative TNP2-like transposon protein [Arabidopsi...   162   2e-38
dbj|BAB02147.1| TNP2-like transposon protein-like [Arabidopsis t...   161   4e-38
pir||E85079 hypothetical protein AT4g08070 [imported] - Arabidop...   159   3e-37
ref|XP_003553349.1| PREDICTED: uncharacterized protein LOC100786...   138   4e-31

>gb|AAD22703.1| putative TNP2-like transposon protein [Arabidopsis thaliana]
          Length = 619

 Score =  167 bits (422), Expect = 1e-39
 Identities = 85/126 (67%), Positives = 97/126 (76%)
 Frame = -2

Query: 380 GKRTFLPAAPHTLSKKDKNIMLKRLTDLKLPDGYSSNIGKRWVKMVEGKIIGLKSHDCHV 201
           GKRT+LPAAP +LSK +K I  KRL D K PDGY SNI  R V + E KI GLKSHD HV
Sbjct: 466 GKRTYLPAAPWSLSKNEKKIFWKRLFDFKGPDGYCSNIS-RGVSVGECKISGLKSHDYHV 524

Query: 200 LIQQLLPVSLRGLLPRGPRDAIFRFCAFFNKLCQRVIHREEMEALDDEIAETLCMLERFF 21
           ++QQLLPV+LRGLLP+GPR AI R CAFFN LCQRVI  E +  L+ EI ETLCM +RFF
Sbjct: 525 MMQQLLPVALRGLLPKGPRTAILRLCAFFNYLCQRVIDIEVISVLETEIVETLCMFKRFF 584

Query: 20  PPSFFD 3
           PP+FFD
Sbjct: 585 PPTFFD 590


>gb|AAC97237.1| putative TNP2-like transposon protein [Arabidopsis thaliana]
          Length = 889

 Score =  162 bits (411), Expect = 2e-38
 Identities = 81/126 (64%), Positives = 96/126 (76%)
 Frame = -2

Query: 380 GKRTFLPAAPHTLSKKDKNIMLKRLTDLKLPDGYSSNIGKRWVKMVEGKIIGLKSHDCHV 201
           GKRT+LPAAP +LSK +K    KRL + K PDGY SNI  R V + + KI+GLKSHD HV
Sbjct: 612 GKRTYLPAAPWSLSKSEKKTFCKRLFEFKGPDGYCSNIS-RGVSLEDCKIMGLKSHDYHV 670

Query: 200 LIQQLLPVSLRGLLPRGPRDAIFRFCAFFNKLCQRVIHREEMEALDDEIAETLCMLERFF 21
           L+QQLLPV+L GLLP+GPR AI R C+FFN LCQRVI  E +  ++ EI ETLCM ERFF
Sbjct: 671 LMQQLLPVALMGLLPKGPRTAIIRLCSFFNHLCQRVIDIEVISVMEAEIVETLCMFERFF 730

Query: 20  PPSFFD 3
           PP+FFD
Sbjct: 731 PPTFFD 736


>dbj|BAB02147.1| TNP2-like transposon protein-like [Arabidopsis thaliana]
          Length = 786

 Score =  161 bits (408), Expect = 4e-38
 Identities = 82/126 (65%), Positives = 99/126 (78%)
 Frame = -2

Query: 380 GKRTFLPAAPHTLSKKDKNIMLKRLTDLKLPDGYSSNIGKRWVKMVEGKIIGLKSHDCHV 201
           G+RT+LP AP +LSK +K +  KRL D + PDGY SNI  R VK+ +  I GLKSHD HV
Sbjct: 493 GQRTYLPPAPWSLSKTEKKVFYKRLFDFRGPDGYCSNIS-RCVKIEDSTIKGLKSHDYHV 551

Query: 200 LIQQLLPVSLRGLLPRGPRDAIFRFCAFFNKLCQRVIHREEMEALDDEIAETLCMLERFF 21
           L+QQLLPV++RGLLP+G R AI R CAFFNKLCQRVI R E+ A+++EI ET+CM ERFF
Sbjct: 552 LMQQLLPVAIRGLLPKGVRIAIGRLCAFFNKLCQRVIDR-EVSAMENEIVETICMFERFF 610

Query: 20  PPSFFD 3
           PPSFFD
Sbjct: 611 PPSFFD 616


>pir||E85079 hypothetical protein AT4g08070 [imported] - Arabidopsis thaliana
           gi|5724773|gb|AAD48077.1|AF160183_4 contains similarity
           to Antirrhinum majus hypothetical protein TNP2
           (GB:X57297); may be a pseudogene [Arabidopsis thaliana]
           gi|7267447|emb|CAB81144.1| AT4g08070 [Arabidopsis
           thaliana]
          Length = 767

 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/126 (62%), Positives = 96/126 (76%)
 Frame = -2

Query: 380 GKRTFLPAAPHTLSKKDKNIMLKRLTDLKLPDGYSSNIGKRWVKMVEGKIIGLKSHDCHV 201
           GKRT+LPAA  +LSK +K +  KRL D K PDGY S+I  R V + + K+ GLKSHD HV
Sbjct: 519 GKRTYLPAALWSLSKSEKKLFCKRLFDFKGPDGYCSDIA-RGVSLEDCKVTGLKSHDYHV 577

Query: 200 LIQQLLPVSLRGLLPRGPRDAIFRFCAFFNKLCQRVIHREEMEALDDEIAETLCMLERFF 21
           L+QQLLP++LRGLLP+GPR AI R C FFN LCQRVI  E++  ++ EI ETLC+ ERFF
Sbjct: 578 LMQQLLPIALRGLLPKGPRVAIGRLCKFFNHLCQRVIDMEQLLEMEAEIVETLCLFERFF 637

Query: 20  PPSFFD 3
           PPSFFD
Sbjct: 638 PPSFFD 643


>ref|XP_003553349.1| PREDICTED: uncharacterized protein LOC100786472 [Glycine max]
          Length = 1064

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/126 (53%), Positives = 90/126 (71%)
 Frame = -2

Query: 380 GKRTFLPAAPHTLSKKDKNIMLKRLTDLKLPDGYSSNIGKRWVKMVEGKIIGLKSHDCHV 201
           G RT+LP A +T+S  +K    + L ++K+P GYSSNI K  V + E K++GLKSHDCHV
Sbjct: 578 GNRTYLPPACYTMSTAEKRSFCECLRNIKVPQGYSSNI-KSLVSVNELKLVGLKSHDCHV 636

Query: 200 LIQQLLPVSLRGLLPRGPRDAIFRFCAFFNKLCQRVIHREEMEALDDEIAETLCMLERFF 21
           L+QQLLPV++RG LP   R AI R C  FN +C +VI  ++++AL+DE+   LC +E FF
Sbjct: 637 LMQQLLPVAIRGTLPEKVRVAISRLCFIFNAICAKVIDPKQLDALEDEVVVVLCQMEMFF 696

Query: 20  PPSFFD 3
           PPSFFD
Sbjct: 697 PPSFFD 702


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