BLASTX nr result

ID: Coptis23_contig00026896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026896
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533975.1| hypothetical protein RCOM_0370390 [Ricinus c...   107   2e-21
ref|XP_002324545.1| predicted protein [Populus trichocarpa] gi|2...   106   3e-21
ref|XP_002309341.1| predicted protein [Populus trichocarpa] gi|2...   105   9e-21
ref|XP_004161870.1| PREDICTED: reticulon-like protein B21-like [...   103   4e-20
ref|XP_004146687.1| PREDICTED: reticulon-like protein B21-like [...   103   4e-20

>ref|XP_002533975.1| hypothetical protein RCOM_0370390 [Ricinus communis]
           gi|223526038|gb|EEF28406.1| hypothetical protein
           RCOM_0370390 [Ricinus communis]
          Length = 604

 Score =  107 bits (267), Expect = 2e-21
 Identities = 47/79 (59%), Positives = 59/79 (74%)
 Frame = -3

Query: 637 KMVKLGFFGVFTLPKICSSYSAILPSSCKFWIQHSRDTWHSFTQKKVVAVVVFILLWKFS 458
           KM KLGFFGVFT+PK+CSSYS  L +  KFWI+  RD W S + KK VA+ +F L+W  S
Sbjct: 478 KMAKLGFFGVFTVPKVCSSYSTQLTAYGKFWIRRFRDAWDSCSHKKAVALAIFTLVWNLS 537

Query: 457 SMLTRIWAVFMLVVVVKYY 401
           SM+ R+WAVFM+ V V+YY
Sbjct: 538 SMVARVWAVFMMYVAVRYY 556


>ref|XP_002324545.1| predicted protein [Populus trichocarpa] gi|222865979|gb|EEF03110.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  106 bits (265), Expect = 3e-21
 Identities = 47/79 (59%), Positives = 59/79 (74%)
 Frame = -3

Query: 637 KMVKLGFFGVFTLPKICSSYSAILPSSCKFWIQHSRDTWHSFTQKKVVAVVVFILLWKFS 458
           KM +LGFFGVFT+PK+CSSYS  L +  KFWI+  RD W S + KK VA+ +F L+W  S
Sbjct: 403 KMARLGFFGVFTVPKVCSSYSTQLTAYGKFWIRRFRDAWESCSHKKAVALCIFTLVWNLS 462

Query: 457 SMLTRIWAVFMLVVVVKYY 401
           SM+ RIWAVFM+ V V+YY
Sbjct: 463 SMVARIWAVFMMFVAVRYY 481


>ref|XP_002309341.1| predicted protein [Populus trichocarpa] gi|222855317|gb|EEE92864.1|
           predicted protein [Populus trichocarpa]
          Length = 722

 Score =  105 bits (261), Expect = 9e-21
 Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
 Frame = -3

Query: 637 KMVKLGFFGVFTLPKICSSYSAILPSSCKFWIQHSRDTWHSFTQKKVVAVVVFILLWKFS 458
           KM KLGFFGVF +PK+CSSYS  L +  KFWI+  RD W S + KK VA+ +F L+W  S
Sbjct: 598 KMAKLGFFGVFIVPKVCSSYSTQLTAYGKFWIRRFRDAWESCSHKKAVALGIFSLVWNLS 657

Query: 457 SMLTRIWAVFMLVVVVKYYXXXXXXXXXXXXXXXXSKT----NQGGRRQRQGVWASRVNP 290
           SM+ RIWAVFM+ V V+YY                +      + GG+RQ  G  +  VN 
Sbjct: 658 SMVARIWAVFMMFVAVRYYQQTMERDDWVEEEDAEADETWHGDSGGQRQGSGPASIDVNE 717

Query: 289 VKE 281
           V++
Sbjct: 718 VRK 720


>ref|XP_004161870.1| PREDICTED: reticulon-like protein B21-like [Cucumis sativus]
          Length = 555

 Score =  103 bits (256), Expect = 4e-20
 Identities = 45/79 (56%), Positives = 58/79 (73%)
 Frame = -3

Query: 637 KMVKLGFFGVFTLPKICSSYSAILPSSCKFWIQHSRDTWHSFTQKKVVAVVVFILLWKFS 458
           K+ K GFFGVFTLPKICSSYS+ L +  KFWI+  RD W S + KK VA+ +F+L+W  S
Sbjct: 423 KVAKWGFFGVFTLPKICSSYSSHLAAYAKFWIRRFRDAWESCSHKKGVALAIFVLVWNLS 482

Query: 457 SMLTRIWAVFMLVVVVKYY 401
           S++ R+WA FML V  +YY
Sbjct: 483 SVVARVWAAFMLFVAFRYY 501


>ref|XP_004146687.1| PREDICTED: reticulon-like protein B21-like [Cucumis sativus]
          Length = 555

 Score =  103 bits (256), Expect = 4e-20
 Identities = 45/79 (56%), Positives = 58/79 (73%)
 Frame = -3

Query: 637 KMVKLGFFGVFTLPKICSSYSAILPSSCKFWIQHSRDTWHSFTQKKVVAVVVFILLWKFS 458
           K+ K GFFGVFTLPKICSSYS+ L +  KFWI+  RD W S + KK VA+ +F+L+W  S
Sbjct: 423 KVAKWGFFGVFTLPKICSSYSSHLAAYAKFWIRRFRDAWESCSHKKGVALAIFVLVWNLS 482

Query: 457 SMLTRIWAVFMLVVVVKYY 401
           S++ R+WA FML V  +YY
Sbjct: 483 SVVARVWAAFMLFVAFRYY 501


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