BLASTX nr result
ID: Coptis23_contig00026896
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00026896 (639 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002533975.1| hypothetical protein RCOM_0370390 [Ricinus c... 107 2e-21 ref|XP_002324545.1| predicted protein [Populus trichocarpa] gi|2... 106 3e-21 ref|XP_002309341.1| predicted protein [Populus trichocarpa] gi|2... 105 9e-21 ref|XP_004161870.1| PREDICTED: reticulon-like protein B21-like [... 103 4e-20 ref|XP_004146687.1| PREDICTED: reticulon-like protein B21-like [... 103 4e-20 >ref|XP_002533975.1| hypothetical protein RCOM_0370390 [Ricinus communis] gi|223526038|gb|EEF28406.1| hypothetical protein RCOM_0370390 [Ricinus communis] Length = 604 Score = 107 bits (267), Expect = 2e-21 Identities = 47/79 (59%), Positives = 59/79 (74%) Frame = -3 Query: 637 KMVKLGFFGVFTLPKICSSYSAILPSSCKFWIQHSRDTWHSFTQKKVVAVVVFILLWKFS 458 KM KLGFFGVFT+PK+CSSYS L + KFWI+ RD W S + KK VA+ +F L+W S Sbjct: 478 KMAKLGFFGVFTVPKVCSSYSTQLTAYGKFWIRRFRDAWDSCSHKKAVALAIFTLVWNLS 537 Query: 457 SMLTRIWAVFMLVVVVKYY 401 SM+ R+WAVFM+ V V+YY Sbjct: 538 SMVARVWAVFMMYVAVRYY 556 >ref|XP_002324545.1| predicted protein [Populus trichocarpa] gi|222865979|gb|EEF03110.1| predicted protein [Populus trichocarpa] Length = 527 Score = 106 bits (265), Expect = 3e-21 Identities = 47/79 (59%), Positives = 59/79 (74%) Frame = -3 Query: 637 KMVKLGFFGVFTLPKICSSYSAILPSSCKFWIQHSRDTWHSFTQKKVVAVVVFILLWKFS 458 KM +LGFFGVFT+PK+CSSYS L + KFWI+ RD W S + KK VA+ +F L+W S Sbjct: 403 KMARLGFFGVFTVPKVCSSYSTQLTAYGKFWIRRFRDAWESCSHKKAVALCIFTLVWNLS 462 Query: 457 SMLTRIWAVFMLVVVVKYY 401 SM+ RIWAVFM+ V V+YY Sbjct: 463 SMVARIWAVFMMFVAVRYY 481 >ref|XP_002309341.1| predicted protein [Populus trichocarpa] gi|222855317|gb|EEE92864.1| predicted protein [Populus trichocarpa] Length = 722 Score = 105 bits (261), Expect = 9e-21 Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 4/123 (3%) Frame = -3 Query: 637 KMVKLGFFGVFTLPKICSSYSAILPSSCKFWIQHSRDTWHSFTQKKVVAVVVFILLWKFS 458 KM KLGFFGVF +PK+CSSYS L + KFWI+ RD W S + KK VA+ +F L+W S Sbjct: 598 KMAKLGFFGVFIVPKVCSSYSTQLTAYGKFWIRRFRDAWESCSHKKAVALGIFSLVWNLS 657 Query: 457 SMLTRIWAVFMLVVVVKYYXXXXXXXXXXXXXXXXSKT----NQGGRRQRQGVWASRVNP 290 SM+ RIWAVFM+ V V+YY + + GG+RQ G + VN Sbjct: 658 SMVARIWAVFMMFVAVRYYQQTMERDDWVEEEDAEADETWHGDSGGQRQGSGPASIDVNE 717 Query: 289 VKE 281 V++ Sbjct: 718 VRK 720 >ref|XP_004161870.1| PREDICTED: reticulon-like protein B21-like [Cucumis sativus] Length = 555 Score = 103 bits (256), Expect = 4e-20 Identities = 45/79 (56%), Positives = 58/79 (73%) Frame = -3 Query: 637 KMVKLGFFGVFTLPKICSSYSAILPSSCKFWIQHSRDTWHSFTQKKVVAVVVFILLWKFS 458 K+ K GFFGVFTLPKICSSYS+ L + KFWI+ RD W S + KK VA+ +F+L+W S Sbjct: 423 KVAKWGFFGVFTLPKICSSYSSHLAAYAKFWIRRFRDAWESCSHKKGVALAIFVLVWNLS 482 Query: 457 SMLTRIWAVFMLVVVVKYY 401 S++ R+WA FML V +YY Sbjct: 483 SVVARVWAAFMLFVAFRYY 501 >ref|XP_004146687.1| PREDICTED: reticulon-like protein B21-like [Cucumis sativus] Length = 555 Score = 103 bits (256), Expect = 4e-20 Identities = 45/79 (56%), Positives = 58/79 (73%) Frame = -3 Query: 637 KMVKLGFFGVFTLPKICSSYSAILPSSCKFWIQHSRDTWHSFTQKKVVAVVVFILLWKFS 458 K+ K GFFGVFTLPKICSSYS+ L + KFWI+ RD W S + KK VA+ +F+L+W S Sbjct: 423 KVAKWGFFGVFTLPKICSSYSSHLAAYAKFWIRRFRDAWESCSHKKGVALAIFVLVWNLS 482 Query: 457 SMLTRIWAVFMLVVVVKYY 401 S++ R+WA FML V +YY Sbjct: 483 SVVARVWAAFMLFVAFRYY 501