BLASTX nr result

ID: Coptis23_contig00026883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026883
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519078.1| conserved hypothetical protein [Ricinus comm...   100   9e-20
ref|XP_003631634.1| PREDICTED: nogo-B receptor-like isoform 1 [V...    99   3e-19
emb|CAN70934.1| hypothetical protein VITISV_032483 [Vitis vinifera]    99   3e-19
ref|XP_002305421.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|NP_001242452.1| uncharacterized protein LOC100796301 [Glycin...    92   4e-17

>ref|XP_002519078.1| conserved hypothetical protein [Ricinus communis]
           gi|223541741|gb|EEF43289.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 243

 Score =  100 bits (250), Expect = 9e-20
 Identities = 45/77 (58%), Positives = 63/77 (81%)
 Frame = -2

Query: 261 QTLQSYLISSGIVNKYKASDLTNLQYLAIVVESQEAYDTARVVKLLHWLSNIGVKHICLY 82
           Q  +SYLIS+G++N+YK  D+  L+YLAIVVES++AY  + V++LL WL  IGVKH+CLY
Sbjct: 35  QVTESYLISNGLLNRYKTLDVGKLRYLAIVVESEDAYQISEVLQLLQWLEAIGVKHLCLY 94

Query: 81  DMDGVLKKTRKIILEKL 31
           D +GVLKK++K I+E+L
Sbjct: 95  DSEGVLKKSKKFIIERL 111


>ref|XP_003631634.1| PREDICTED: nogo-B receptor-like isoform 1 [Vitis vinifera]
           gi|359475284|ref|XP_003631635.1| PREDICTED: nogo-B
           receptor-like isoform 2 [Vitis vinifera]
           gi|297741434|emb|CBI32565.3| unnamed protein product
           [Vitis vinifera]
          Length = 255

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/81 (55%), Positives = 68/81 (83%)
 Frame = -2

Query: 255 LQSYLISSGIVNKYKASDLTNLQYLAIVVESQEAYDTARVVKLLHWLSNIGVKHICLYDM 76
           L+S  ISSG++ +Y+A +L NL+YLAIV+ES+EA+   +V++LL+WL+ IGVKH+CLYD 
Sbjct: 46  LESCFISSGLLKRYEALNLGNLRYLAIVIESEEAHQIPKVIELLNWLATIGVKHVCLYDN 105

Query: 75  DGVLKKTRKIILEKLGESRLW 13
           +GVLKK+++ ILEKL ++ L+
Sbjct: 106 EGVLKKSKEAILEKLTDATLF 126


>emb|CAN70934.1| hypothetical protein VITISV_032483 [Vitis vinifera]
          Length = 199

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/81 (55%), Positives = 68/81 (83%)
 Frame = -2

Query: 255 LQSYLISSGIVNKYKASDLTNLQYLAIVVESQEAYDTARVVKLLHWLSNIGVKHICLYDM 76
           L+S  ISSG++ +Y+A +L NL+YLAIV+ES+EA+   +V++LL+WL+ IGVKH+CLYD 
Sbjct: 49  LESCFISSGLLKRYEALNLGNLRYLAIVIESEEAHQIPKVIELLNWLATIGVKHVCLYDN 108

Query: 75  DGVLKKTRKIILEKLGESRLW 13
           +GVLKK+++ ILEKL ++ L+
Sbjct: 109 EGVLKKSKEAILEKLTDATLF 129


>ref|XP_002305421.1| predicted protein [Populus trichocarpa] gi|222848385|gb|EEE85932.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/85 (50%), Positives = 65/85 (76%)
 Frame = -2

Query: 255 LQSYLISSGIVNKYKASDLTNLQYLAIVVESQEAYDTARVVKLLHWLSNIGVKHICLYDM 76
           ++SYLISSG++ +Y++ D+  L+YLAIV+ES +A   ++V++LL WL  IGVKH+CLYD 
Sbjct: 46  IESYLISSGLLKRYRSIDVGKLRYLAIVIESDDACRISKVIQLLQWLQAIGVKHLCLYDT 105

Query: 75  DGVLKKTRKIILEKLGESRLWHLED 1
           +GVLKK+++ IL KL  + L+   D
Sbjct: 106 EGVLKKSKESILAKLKNATLFEEAD 130


>ref|NP_001242452.1| uncharacterized protein LOC100796301 [Glycine max]
           gi|255645054|gb|ACU23026.1| unknown [Glycine max]
          Length = 254

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/78 (53%), Positives = 61/78 (78%)
 Frame = -2

Query: 252 QSYLISSGIVNKYKASDLTNLQYLAIVVESQEAYDTARVVKLLHWLSNIGVKHICLYDMD 73
           +SY IS G++ KYK+     ++YLAIV+ES+EAY  +RVVKLL WL  IGVK++CLYDM+
Sbjct: 47  ESYFISCGVLKKYKSLHSGKVRYLAIVIESEEAYQISRVVKLLQWLDIIGVKNVCLYDMN 106

Query: 72  GVLKKTRKIILEKLGESR 19
           GVLKK+++ I ++L  ++
Sbjct: 107 GVLKKSKETIFKELKNAK 124


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