BLASTX nr result

ID: Coptis23_contig00026872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026872
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65141.1| hypothetical protein VITISV_034615 [Vitis vinifera]   159   6e-37
ref|XP_002270693.2| PREDICTED: uncharacterized protein LOC100261...   154   2e-35
ref|XP_002524705.1| ATP binding protein, putative [Ricinus commu...   130   3e-28
ref|XP_002316669.1| predicted protein [Populus trichocarpa] gi|2...   122   1e-25
ref|XP_002305645.1| predicted protein [Populus trichocarpa] gi|2...   121   2e-25

>emb|CAN65141.1| hypothetical protein VITISV_034615 [Vitis vinifera]
          Length = 540

 Score =  159 bits (403), Expect = 6e-37
 Identities = 109/256 (42%), Positives = 130/256 (50%), Gaps = 15/256 (5%)
 Frame = +2

Query: 11   GTLERGRSEVSSIMSEVPDYLFGLDNIDE----NRESKLKNRNVLSENXXXXXXXXXXXX 178
            G LERGRSE SSI+SEVPDYLFGLDN D+     RESKLK R  L+EN            
Sbjct: 282  GGLERGRSEASSIVSEVPDYLFGLDNSDDIQALPRESKLKTRTALAENVSVSDPGSPAPA 341

Query: 179  XXXXLYCSTTS------VPDLPPVKTKVDI---PITVFMDRKENQIDTGEKFVAQQTSYP 331
                 +CST+S      +PDLPPVKTK D    P+ V  +  E   D  E  V Q   Y 
Sbjct: 342  ITSP-FCSTSSGPSVPAIPDLPPVKTKPDKSIPPVEVKDNPPEGFADVIEPAVPQSGGYA 400

Query: 332  SNTMWNYVPEARYQHPAPLQP-QPMPVYYVPGLVPGSNXXXXXXXXXXXXXXXXXXXXXS 508
             N MW+Y P++ Y    P QP   +PVYYVPG VP  N                      
Sbjct: 401  GNPMWHYNPDSHY----PGQPVHQIPVYYVPGPVPPGNMPVQSVPVRPQYVPQYP----G 452

Query: 509  PVGQIPTSYRQQVPVVAQVYGAGIRAVGPVDGYEYQAGMKQDGMS-PVYY*GRNFGVVPG 685
            P GQIP  +R   P + QVYG  IRAVGP++GY+    +  DGM+  VYY  R  G+V  
Sbjct: 453  PPGQIPVGFRHPGPGMGQVYGGAIRAVGPMEGYDMPMRVVSDGMNQQVYYGVRTTGMVQA 512

Query: 686  YQPTMVPSAARRGTGD 733
            Y P MV  A     G+
Sbjct: 513  YPPGMVVPAGEEFQGN 528


>ref|XP_002270693.2| PREDICTED: uncharacterized protein LOC100261837 [Vitis vinifera]
          Length = 428

 Score =  154 bits (390), Expect = 2e-35
 Identities = 108/257 (42%), Positives = 130/257 (50%), Gaps = 16/257 (6%)
 Frame = +2

Query: 11  GTLERGRSEVSSIMSEVPDYLFGLDNIDE----NRESKLKNRNVLSENXXXXXXXXXXXX 178
           G LERGRSE SSI+SEVPDYLFGLDN D+     RESKLK R  L+EN            
Sbjct: 169 GGLERGRSEASSIVSEVPDYLFGLDNSDDIQALPRESKLKTRTALAENVSVSDPGSPAPA 228

Query: 179 XXXXLYCSTTS------VPDLPPVKTKVDI---PITVFMDRKENQIDTGEKFVAQQTSYP 331
                +CST+S      +PDLPPVKTK D    P+ V  +  E   D  E  + Q   Y 
Sbjct: 229 ITSP-FCSTSSGPSVPAIPDLPPVKTKPDKSIPPVEVKDNPPEGFADVIEPAIPQSGGYA 287

Query: 332 SNTMWNYV-PEARYQHPAPLQP-QPMPVYYVPGLVPGSNXXXXXXXXXXXXXXXXXXXXX 505
            N MW+Y  P++ Y    P QP   +PVYYVPG VP  N                     
Sbjct: 288 GNPMWHYNNPDSHY----PGQPVHQIPVYYVPGPVPPGNMPVQSVPVRAQYVPQYP---- 339

Query: 506 SPVGQIPTSYRQQVPVVAQVYGAGIRAVGPVDGYEYQAGMKQDGMS-PVYY*GRNFGVVP 682
            P GQIP  +R   P + QVYG  IRAVGP++GY+    +  DGM+  VYY  R  G+V 
Sbjct: 340 GPPGQIPVGFRHPGPGMGQVYGGAIRAVGPMEGYDMPMRVVSDGMNQQVYYGVRTAGMVQ 399

Query: 683 GYQPTMVPSAARRGTGD 733
            Y P MV  A     G+
Sbjct: 400 AYPPGMVVPAGEEFQGN 416


>ref|XP_002524705.1| ATP binding protein, putative [Ricinus communis]
           gi|223536066|gb|EEF37724.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 417

 Score =  130 bits (328), Expect = 3e-28
 Identities = 94/243 (38%), Positives = 122/243 (50%), Gaps = 13/243 (5%)
 Frame = +2

Query: 17  LERGRSEVSSIMSEVPDYLFGLDNIDENRESKLKNRNVLSENXXXXXXXXXXXXXXXXLY 196
           LERGRSE SSI+SEVPDYLFGLD  D+ RE KLK R+ + +N                 Y
Sbjct: 170 LERGRSEASSIVSEVPDYLFGLDIADDTREPKLKTRHFIHDNVSASDPGSPAPVVSSP-Y 228

Query: 197 CSTTS----VPDLPPVKTKVDIPITVFMDRK---ENQIDTGEKFVAQQTSYPSNTMWNYV 355
           CST+S    +PDLPPVKTK+D P  +   ++   E   +  E+ V Q TSYP N + +Y+
Sbjct: 229 CSTSSAVPAIPDLPPVKTKIDNPDPIPQPKQIPLETSSEPIEQTVTQPTSYPGNPVMHYI 288

Query: 356 PEARYQHPAPLQPQPMPVYYVPGLVPGSNXXXXXXXXXXXXXXXXXXXXXSPVGQIPTSY 535
           P   Y        Q +PVYYVPG VP                           GQ+P  Y
Sbjct: 289 PNPHYPGHT---VQQIPVYYVPGSVPPPGNVPVHIRPQYVQQYPV------STGQMPIGY 339

Query: 536 RQQVPVVAQVY-GAGIR----AVGPVDGYEYQAGMKQDGMS-PVYY*GRNFGVVPGYQPT 697
             Q+P + Q+Y GAG+R     + P DG      +  DG++  VYY  RN  +VPGY   
Sbjct: 340 HPQLPGMGQIYGGAGMRPMTAGMDPYDG----GRVVSDGVNQQVYYGVRN--MVPGYPGM 393

Query: 698 MVP 706
            +P
Sbjct: 394 AMP 396


>ref|XP_002316669.1| predicted protein [Populus trichocarpa] gi|222859734|gb|EEE97281.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  122 bits (306), Expect = 1e-25
 Identities = 101/252 (40%), Positives = 124/252 (49%), Gaps = 23/252 (9%)
 Frame = +2

Query: 2   SVSGTLERGRSEVSSIMSEVPDYLFGLDNIDEN---RESKLKNRNVLSENXXXXXXXXXX 172
           S S  LERGRSE SSI+SEVPDYLFGL+N DE    RE KLK+R V+++N          
Sbjct: 166 SGSSRLERGRSEASSIVSEVPDYLFGLENSDEGNIPREPKLKSRFVMNDNVSASDPDSPA 225

Query: 173 XXXXXXLYCSTTSV-------PDLPPVKTKVD--IPITVFMDRK--ENQIDTGEKFVAQQ 319
                  YCS +SV       PDLPPVKT+ D   P+TV + R   E   D  E     Q
Sbjct: 226 PVVSYP-YCSASSVMPAVPSIPDLPPVKTEPDDLEPVTVRVKRNPVEGYCDPIETPPITQ 284

Query: 320 T----SYPSNTMWNYVPEARYQHPAPLQP-QPMPVYYVPGLVPGSNXXXXXXXXXXXXXX 484
           +    S PSN + +Y+P++ Y    P  P Q MPVYYVPG +   N              
Sbjct: 285 SPGYPSNPSNPVMHYIPDSLY----PGSPVQQMPVYYVPGTISPRNVPVHPIQMRAPYAQ 340

Query: 485 XXXXXXXSPVGQIPTSYRQQVPVVAQVY-GAGIRAVGPVDGYEYQAGMKQDGMS-PVYY* 658
                   P  Q+P  Y Q VP   QVY G  +R V   D YE    +  DGM+  VYY 
Sbjct: 341 QYPI----PTEQMPIGYHQAVPGTGQVYSGVAMRPVATKDRYEATTRVVPDGMNQQVYYG 396

Query: 659 GRN--FGVVPGY 688
            RN   G+V G+
Sbjct: 397 VRNASSGIVQGH 408


>ref|XP_002305645.1| predicted protein [Populus trichocarpa] gi|222848609|gb|EEE86156.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  121 bits (304), Expect = 2e-25
 Identities = 93/259 (35%), Positives = 128/259 (49%), Gaps = 18/259 (6%)
 Frame = +2

Query: 17  LERGRSEVSSIMSEVPDYLFGLDNIDENRESKLKNRNVLSENXXXXXXXXXXXXXXXXLY 196
           LERGRSE SSI+SEVPDYLFGL+N D   E+K K+R V+++N                 Y
Sbjct: 173 LERGRSEASSIISEVPDYLFGLENSD---ETKQKSRFVMNDNVSASDPGSPAPVVSSP-Y 228

Query: 197 CSTTSV-------PDLPPVKTKVDIPITVFMDRKENQIDTGEK-----FVAQQTSYPSNT 340
           CST+SV       PDLPPVKTK D P  + +  K+   +   +      + Q T YP N 
Sbjct: 229 CSTSSVVPTMPSIPDLPPVKTKPDYPDPITVQVKQTPFEGYSEPMEPPPMTQPTGYPGNP 288

Query: 341 MWNYVPEARYQHPAPLQPQPMPVYYVPGLVPGSNXXXXXXXXXXXXXXXXXXXXXSPVGQ 520
           + +Y+P++ Y   AP+  Q MPVYYV G +P  N                        GQ
Sbjct: 289 VMHYIPDSHYS-GAPV--QQMPVYYVQGTIPPGNVQIRSPYAQQYPI---------ATGQ 336

Query: 521 IPTSYRQQVPVVAQVY-GAGIRAVGPVDGYEYQAGMKQDGMSPVYY*G---RNFGVVPGY 688
           +P  Y Q V  + QVY G  +R V  +D Y+  A +  DG++  +Y G    + G+V GY
Sbjct: 337 MPIRYHQAVQGMGQVYSGMTMRPVAAMDPYD-GARVVSDGVNQQFYYGVRNASTGMVQGY 395

Query: 689 QPTMVPSA--ARRGTGDEN 739
              ++P     +R   D N
Sbjct: 396 PGMVIPGGEDMKRTASDVN 414


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