BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026870
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173270.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    68   5e-12
ref|XP_004140188.1| PREDICTED: F-box protein At2g32560-like isof...    67   8e-12
ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isof...    67   8e-12
ref|XP_002533285.1| conserved hypothetical protein [Ricinus comm...    66   1e-11
ref|XP_002277192.1| PREDICTED: F-box protein At2g32560-like [Vit...    64   1e-10

>ref|XP_004173270.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At2g32560-like
           [Cucumis sativus]
          Length = 369

 Score = 68.2 bits (165), Expect(2) = 5e-12
 Identities = 42/94 (44%), Positives = 51/94 (54%), Gaps = 20/94 (21%)
 Frame = +3

Query: 21  EAHEKKGVG-VIRQAAYREWKCKYSMR---KEFYQKKKKSWLRSLSFVCSTS-------- 164
           E H K+  G VI QAAYREW+   + R       Q K+KS +R  S V S S        
Sbjct: 128 EKHMKRKWGKVIGQAAYREWQWHLASRAGESNLKQNKQKSLIRLFSLVXSLSWIRSKVNE 187

Query: 165 --------LPMDSIISWYLCLERGKLWFPAQVYN 242
                   LP+DSI++WYL LE G+ WFPAQVYN
Sbjct: 188 NSNTPRTFLPVDSIMAWYLALETGRFWFPAQVYN 221



 Score = 27.3 bits (59), Expect(2) = 5e-12
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = +1

Query: 4   SDYLWERHMKKK 39
           SD+LWE+HMK+K
Sbjct: 123 SDHLWEKHMKRK 134


>ref|XP_004140188.1| PREDICTED: F-box protein At2g32560-like isoform 1 [Cucumis sativus]
          Length = 396

 Score = 67.4 bits (163), Expect(2) = 8e-12
 Identities = 42/94 (44%), Positives = 51/94 (54%), Gaps = 20/94 (21%)
 Frame = +3

Query: 21  EAHEKKGVG-VIRQAAYREWKCKYSMR---KEFYQKKKKSWLRSLSFVCSTS-------- 164
           E H K+  G VI QAAYREW+   + R       Q K+KS +R  SF  S S        
Sbjct: 128 EKHMKRKWGKVIGQAAYREWQWHLASRAGESNLKQNKQKSLIRLFSFGWSLSWIRSKVNE 187

Query: 165 --------LPMDSIISWYLCLERGKLWFPAQVYN 242
                   LP+DSI++WYL LE G+ WFPAQVYN
Sbjct: 188 NSNTPRTFLPVDSIMAWYLALETGRFWFPAQVYN 221



 Score = 27.3 bits (59), Expect(2) = 8e-12
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = +1

Query: 4   SDYLWERHMKKK 39
           SD+LWE+HMK+K
Sbjct: 123 SDHLWEKHMKRK 134


>ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isoform 2 [Cucumis sativus]
          Length = 368

 Score = 67.4 bits (163), Expect(2) = 8e-12
 Identities = 42/94 (44%), Positives = 51/94 (54%), Gaps = 20/94 (21%)
 Frame = +3

Query: 21  EAHEKKGVG-VIRQAAYREWKCKYSMR---KEFYQKKKKSWLRSLSFVCSTS-------- 164
           E H K+  G VI QAAYREW+   + R       Q K+KS +R  SF  S S        
Sbjct: 100 EKHMKRKWGKVIGQAAYREWQWHLASRAGESNLKQNKQKSLIRLFSFGWSLSWIRSKVNE 159

Query: 165 --------LPMDSIISWYLCLERGKLWFPAQVYN 242
                   LP+DSI++WYL LE G+ WFPAQVYN
Sbjct: 160 NSNTPRTFLPVDSIMAWYLALETGRFWFPAQVYN 193



 Score = 27.3 bits (59), Expect(2) = 8e-12
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = +1

Query: 4   SDYLWERHMKKK 39
           SD+LWE+HMK+K
Sbjct: 95  SDHLWEKHMKRK 106


>ref|XP_002533285.1| conserved hypothetical protein [Ricinus communis]
           gi|223526888|gb|EEF29096.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 408

 Score = 66.2 bits (160), Expect(2) = 1e-11
 Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 21/95 (22%)
 Frame = +3

Query: 21  EAHEKKGVG-VIRQAAYREWKCKYSMRKEF---YQKKKKSWLRSLSFV-----------C 155
           E H K+  G +I  AAYREW+   + R +F    Q K+K  ++ LS V           C
Sbjct: 139 ERHMKQKWGKIIGPAAYREWQFHIASRNDFGTCKQGKQKGLMKLLSIVWPPSWIIPKDDC 198

Query: 156 S------TSLPMDSIISWYLCLERGKLWFPAQVYN 242
           +      +SLP+DSI+SWYL LE G+ WFPAQVYN
Sbjct: 199 NIFIKQRSSLPVDSIMSWYLALETGRFWFPAQVYN 233



 Score = 28.1 bits (61), Expect(2) = 1e-11
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = +1

Query: 4   SDYLWERHMKKK 39
           SD+LWERHMK+K
Sbjct: 134 SDHLWERHMKQK 145


>ref|XP_002277192.1| PREDICTED: F-box protein At2g32560-like [Vitis vinifera]
          Length = 324

 Score = 63.5 bits (153), Expect(2) = 1e-10
 Identities = 42/93 (45%), Positives = 49/93 (52%), Gaps = 19/93 (20%)
 Frame = +3

Query: 21  EAHEKKGVG-VIRQAAYREWKCKYSMRKE---FYQKKKKSWLRSLSFVC----------- 155
           E H K+  G VI  AAYREW+   + RK      +  K+   RSL  VC           
Sbjct: 59  EKHMKQKWGRVIGPAAYREWQWHIASRKRPSLLKKCNKRGLFRSLFSVCPLSWIRPKLES 118

Query: 156 ----STSLPMDSIISWYLCLERGKLWFPAQVYN 242
               S SL +DSI +WYL LE GKLWFPAQVYN
Sbjct: 119 SGEPSCSLSVDSIKAWYLSLESGKLWFPAQVYN 151



 Score = 26.9 bits (58), Expect(2) = 1e-10
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = +1

Query: 4  SDYLWERHMKKK 39
          SD+LWE+HMK+K
Sbjct: 54 SDHLWEKHMKQK 65