BLASTX nr result

ID: Coptis23_contig00026863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026863
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268658.1| PREDICTED: uncharacterized protein LOC100241...    73   3e-11
ref|XP_004152251.1| PREDICTED: uncharacterized protein LOC101206...    72   6e-11
ref|XP_002321007.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002523082.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_002301478.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002268658.1| PREDICTED: uncharacterized protein LOC100241933 [Vitis vinifera]
          Length = 269

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
 Frame = +2

Query: 170 LNSRHTLESCTYQLHTWKPFXXXXXXXXXXXDSSDHTSKPYYNSSTSTPTPNGAHNTKRP 349
           ++ + ++ESCT+QLH+W+PF           DS  H SKPY    + T + NG H +KRP
Sbjct: 1   MSPKTSIESCTFQLHSWRPFQLPTTPKTLEPDS--HNSKPY----SITTSSNGLH-SKRP 53

Query: 350 CLFDR--SFSIDTIDMSRLNLIEDGE--KNLVNNKDKFKWV 460
           CL DR  SF ID +D+S+L+L+ED +   +   N+   +W+
Sbjct: 54  CLSDRKTSFPIDALDISKLSLLEDDKPASSAPRNRGNVRWI 94


>ref|XP_004152251.1| PREDICTED: uncharacterized protein LOC101206482 [Cucumis sativus]
          Length = 266

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
 Frame = +2

Query: 155 MTNKTLNSRHTLESCTYQLHTWKPFXXXXXXXXXXXDSSDHT-SKPYYNSSTSTPTPNGA 331
           M+ + L+SRH+++SCT + H W PF           ++S  T SKPYY   +STP     
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYY---SSTPL---- 53

Query: 332 HNTKRPCLFDR--SFSIDTIDMSRLNLIEDGEKNL 430
            +TKRPCL DR  SF++D IDMS L+LI+D + ++
Sbjct: 54  -HTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSI 87


>ref|XP_002321007.1| predicted protein [Populus trichocarpa] gi|222861780|gb|EEE99322.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
 Frame = +2

Query: 173 NSRHTLESCTYQLHTWKPFXXXXXXXXXXXDSSDHTSKPYYNSSTSTPTPNGAHNTKRPC 352
           NSRH+++SCT QLH+W+PF           DS   T+   Y SS + P        KRPC
Sbjct: 6   NSRHSIDSCTLQLHSWRPF----------LDSDPPTNSKPYASSRTLP--------KRPC 47

Query: 353 LFDRSFS----IDTIDMSRLNLIEDGEKNLVNNK 442
           L DR+ S    ID+ID+S+L+L++D + N  NNK
Sbjct: 48  LSDRATSFPSNIDSIDISKLSLLQDDDNN--NNK 79


>ref|XP_002523082.1| conserved hypothetical protein [Ricinus communis]
           gi|223537644|gb|EEF39267.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
 Frame = +2

Query: 155 MTNKTLNSRHTLESCTYQLHTWKPFXXXXXXXXXXXDSSDHTSKPYYNSSTSTPTPNGAH 334
           M++++L+SRH+++SCT+QLH+W+PF                    +  +  S P    + 
Sbjct: 1   MSHRSLDSRHSIDSCTFQLHSWRPF--------------------HLQTLDSDPPKPYSS 40

Query: 335 NTKRPCLFDR--SFSIDTIDMSRLNLIED 415
            TKRPCL DR  SF ID+ID+S+L++I+D
Sbjct: 41  TTKRPCLSDRTTSFPIDSIDISKLSIIDD 69


>ref|XP_002301478.1| predicted protein [Populus trichocarpa] gi|222843204|gb|EEE80751.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/94 (45%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
 Frame = +2

Query: 173 NSRHTLESCTYQLHTWKPFXXXXXXXXXXXDSSDHTSKPYYNSSTSTPTPNGAHNTKRPC 352
           NSR +L+SCT QLH+W+PF           DS   TS   Y    S+PT      TKRPC
Sbjct: 4   NSRQSLDSCTLQLHSWRPF----------LDSDPTTS---YKPHASSPT-----LTKRPC 45

Query: 353 LFDRSFS----IDTIDMSRLNLIEDGEKNLVNNK 442
           L DRS S    +D+ID+S+L L+ED   N  NNK
Sbjct: 46  LSDRSTSFPSNVDSIDLSKLTLLEDDHNN-TNNK 78


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