BLASTX nr result

ID: Coptis23_contig00026860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026860
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270165.1| PREDICTED: disease resistance protein At4g27...    60   2e-07
emb|CBI20505.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002279972.1| PREDICTED: disease resistance protein At4g27...    59   5e-07
emb|CAN73533.1| hypothetical protein VITISV_012395 [Vitis vinifera]    58   7e-07
ref|XP_002279992.2| PREDICTED: disease resistance protein At4g27...    58   9e-07

>ref|XP_002270165.1| PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
          Length = 982

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/71 (39%), Positives = 46/71 (64%)
 Frame = -3

Query: 472  LGRLPRLTSFSRRDSHSDWPSLEELKLYECDNLKKLPLGADSVPRLKVLNVDPVWFDQLE 293
            L +LP L + S+ +    WPS+EEL + +CD+LK+LPL   SV  +K +  +  W+ +LE
Sbjct: 900  LRKLPTLKALSKEEE--SWPSIEELTVNDCDHLKRLPLNRQSVNIIKKIRGELEWWRRLE 957

Query: 292  WQDQGLKTRLQ 260
            W D+ +++ LQ
Sbjct: 958  WGDEEMRSSLQ 968


>emb|CBI20505.3| unnamed protein product [Vitis vinifera]
          Length = 923

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/63 (44%), Positives = 38/63 (60%)
 Frame = -3

Query: 472  LGRLPRLTSFSRRDSHSDWPSLEELKLYECDNLKKLPLGADSVPRLKVLNVDPVWFDQLE 293
            LG LP+LT+ SR +    WP LE L + EC NL KLPL   S   +K +  + +W+D LE
Sbjct: 842  LGCLPQLTTLSREEE--TWPHLEHLIVRECGNLNKLPLNVQSANSIKEIRGELIWWDTLE 899

Query: 292  WQD 284
            W +
Sbjct: 900  WDN 902


>ref|XP_002279972.1| PREDICTED: disease resistance protein At4g27190 [Vitis vinifera]
          Length = 989

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/63 (44%), Positives = 38/63 (60%)
 Frame = -3

Query: 472  LGRLPRLTSFSRRDSHSDWPSLEELKLYECDNLKKLPLGADSVPRLKVLNVDPVWFDQLE 293
            LG LP+LT+ SR +    WP LE L + EC NL KLPL   S   +K +  + +W+D LE
Sbjct: 908  LGCLPQLTTLSREEE--TWPHLEHLIVRECGNLNKLPLNVQSANSIKEIRGELIWWDTLE 965

Query: 292  WQD 284
            W +
Sbjct: 966  WDN 968


>emb|CAN73533.1| hypothetical protein VITISV_012395 [Vitis vinifera]
          Length = 1705

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/63 (44%), Positives = 38/63 (60%)
 Frame = -3

Query: 472  LGRLPRLTSFSRRDSHSDWPSLEELKLYECDNLKKLPLGADSVPRLKVLNVDPVWFDQLE 293
            LG LP+LT+ SR +    WP LE L + EC NL KLPL   S   +K +  + +W+D LE
Sbjct: 844  LGCLPQLTTLSREEE--TWPHLEHLIVRECRNLNKLPLNVQSANSIKEIRGELIWWDTLE 901

Query: 292  WQD 284
            W +
Sbjct: 902  WDN 904


>ref|XP_002279992.2| PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
          Length = 996

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/71 (42%), Positives = 40/71 (56%)
 Frame = -3

Query: 466  RLPRLTSFSRRDSHSDWPSLEELKLYECDNLKKLPLGADSVPRLKVLNVDPVWFDQLEWQ 287
            RLP+L + SR++    W  LE + + EC +LKKLPL   S   LK +  D  W+ QLEW 
Sbjct: 921  RLPKLKTLSRQEE--TWQHLEHIYVEECKSLKKLPLNEQSANTLKEIRGDMEWWKQLEWD 978

Query: 286  DQGLKTRLQTL 254
            D    + LQ L
Sbjct: 979  DDFTSSTLQPL 989


Top