BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026827
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera]   107   8e-22
emb|CBI33773.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]           106   2e-21
ref|XP_002524919.1| cyclin d, putative [Ricinus communis] gi|223...   103   1e-20
ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]       97   1e-18

>emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera]
          Length = 372

 Score =  107 bits (268), Expect = 8e-22
 Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
 Frame = -2

Query: 460 QLMDILKISKDRVNDCYQLILDSVLSYNGHVYNS--KRKFQSIPSSPNGVIDVSFSCEXX 287
           QL+ +LKISK+ V+DCY+LIL+  L  +GH  N   KRK  S+PSSP+G+ D  FSC+  
Sbjct: 269 QLLSVLKISKBDVDDCYKLILE-FLGXHGHTQNQTHKRKHLSLPSSPSGIFDAPFSCDSS 327

Query: 286 XXXXXXXXXXXXSPEPLFKKSRAQDQQMRLPSFNRVFVDVLSTP 155
                       S +PLFKKSRAQDQQMRLPS NRV VDVLS+P
Sbjct: 328 SDSWAMATSISSSSQPLFKKSRAQDQQMRLPSLNRVSVDVLSSP 371


>emb|CBI33773.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  106 bits (264), Expect = 2e-21
 Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
 Frame = -2

Query: 460 QLMDILKISKDRVNDCYQLILDSVLSYNGHVYNS--KRKFQSIPSSPNGVIDVSFSCEXX 287
           QL+ +LKISK+ V+DCY+LIL+  L  +GH  N   KRK  S+PSSP+G+ D  FSC+  
Sbjct: 206 QLLSVLKISKNDVDDCYKLILE-FLGSHGHTQNQTHKRKHLSLPSSPSGIFDAPFSCDSS 264

Query: 286 XXXXXXXXXXXXSPEPLFKKSRAQDQQMRLPSFNRVFVDVLSTP 155
                       S +PLFKKSRAQDQQMRLPS NRV VDVLS+P
Sbjct: 265 SDSWAMATSISSSSQPLFKKSRAQDQQMRLPSLNRVSVDVLSSP 308


>ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]
          Length = 372

 Score =  106 bits (264), Expect = 2e-21
 Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
 Frame = -2

Query: 460 QLMDILKISKDRVNDCYQLILDSVLSYNGHVYNS--KRKFQSIPSSPNGVIDVSFSCEXX 287
           QL+ +LKISK+ V+DCY+LIL+  L  +GH  N   KRK  S+PSSP+G+ D  FSC+  
Sbjct: 269 QLLSVLKISKNDVDDCYKLILE-FLGSHGHTQNQTHKRKHLSLPSSPSGIFDAPFSCDSS 327

Query: 286 XXXXXXXXXXXXSPEPLFKKSRAQDQQMRLPSFNRVFVDVLSTP 155
                       S +PLFKKSRAQDQQMRLPS NRV VDVLS+P
Sbjct: 328 SDSWAMATSISSSSQPLFKKSRAQDQQMRLPSLNRVSVDVLSSP 371


>ref|XP_002524919.1| cyclin d, putative [Ricinus communis] gi|223535754|gb|EEF37416.1|
           cyclin d, putative [Ricinus communis]
          Length = 276

 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/102 (54%), Positives = 72/102 (70%)
 Frame = -2

Query: 460 QLMDILKISKDRVNDCYQLILDSVLSYNGHVYNSKRKFQSIPSSPNGVIDVSFSCEXXXX 281
           QLM ++KIS+++VN+CY+LIL+  LS N +  + KRK  S+P SPNG+ID  FSC+    
Sbjct: 177 QLMSVIKISENKVNECYKLILE--LSGNQNK-SCKRKHPSMPRSPNGIIDAYFSCDSSND 233

Query: 280 XXXXXXXXXXSPEPLFKKSRAQDQQMRLPSFNRVFVDVLSTP 155
                     SP PLFK+SR QDQQMRLPS NR+FVDVLS+P
Sbjct: 234 SWNLSSTVSSSPVPLFKRSRTQDQQMRLPSLNRMFVDVLSSP 275


>ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]
          Length = 386

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 55/108 (50%), Positives = 68/108 (62%), Gaps = 5/108 (4%)
 Frame = -2

Query: 460 QLMDILKISKDRVNDCYQLILDSVLSYNGHVYNS----KRKFQSIPSSPNGVIDVSFSCE 293
           QL+ ILKI KD+V +C+QLI++     N H Y      KRK+  IP SPNGV+D  FSC+
Sbjct: 281 QLLGILKIDKDKVTECHQLIVEVS---NTHFYAQNNPHKRKYTKIPGSPNGVMDAYFSCD 337

Query: 292 XXXXXXXXXXXXXXSP-EPLFKKSRAQDQQMRLPSFNRVFVDVLSTPP 152
                         SP +PLFKKSR Q+QQMRLPS NRVFVDV+ + P
Sbjct: 338 SSNDSWAVESSVSSSPVDPLFKKSRTQEQQMRLPSLNRVFVDVIGSSP 385