BLASTX nr result

ID: Coptis23_contig00026819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026819
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis ...   251   3e-65
ref|XP_004162787.1| PREDICTED: scarecrow-like protein 28-like [C...   251   4e-65
ref|XP_004148280.1| PREDICTED: LOW QUALITY PROTEIN: scarecrow-li...   251   4e-65
ref|XP_002303565.1| GRAS family transcription factor [Populus tr...   249   1e-64
ref|XP_002299559.1| GRAS family transcription factor [Populus tr...   248   3e-64

>ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis vinifera]
          Length = 676

 Score =  251 bits (642), Expect = 3e-65
 Identities = 121/140 (86%), Positives = 132/140 (94%)
 Frame = +1

Query: 1   LHFTCNEMLLRSFEGKDRVHIIDFDIKQGLQWPSLFQSLASRSSPPSHVRITGIGESKKD 180
           +HFT NE+LLR+FEGKDRVHIIDFDIKQGLQWPSLFQSLASR++PPSHVRITG+GESK++
Sbjct: 387 IHFTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGVGESKQE 446

Query: 181 LQETGDRLAGFAGALSLPFEFHAVVDRLEDVRLWMLHVKEKESVAVNCILQLHKMLYDES 360
           L ETGDRLAGFA AL+LPFEFH VVDRLEDVRLWMLHVK+KESVAVNCI QLHK LYD S
Sbjct: 447 LNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKDKESVAVNCIFQLHKTLYDGS 506

Query: 361 GGALRDFLGLIRSTNPMVVL 420
           GGALRDFLGLIRSTNP +VL
Sbjct: 507 GGALRDFLGLIRSTNPSIVL 526


>ref|XP_004162787.1| PREDICTED: scarecrow-like protein 28-like [Cucumis sativus]
          Length = 658

 Score =  251 bits (641), Expect = 4e-65
 Identities = 121/140 (86%), Positives = 132/140 (94%)
 Frame = +1

Query: 1   LHFTCNEMLLRSFEGKDRVHIIDFDIKQGLQWPSLFQSLASRSSPPSHVRITGIGESKKD 180
           +HFT NEMLLR+FEGKD+VHIIDFDIKQGLQWPSLFQSLASR++PPSHVRITGIGESK++
Sbjct: 356 IHFTANEMLLRAFEGKDKVHIIDFDIKQGLQWPSLFQSLASRANPPSHVRITGIGESKQE 415

Query: 181 LQETGDRLAGFAGALSLPFEFHAVVDRLEDVRLWMLHVKEKESVAVNCILQLHKMLYDES 360
           L ETGDRLAGFA AL LPFEFHAVVDRLEDVRLWMLHVKE+ESV VNCILQLHK LYD +
Sbjct: 416 LNETGDRLAGFAEALRLPFEFHAVVDRLEDVRLWMLHVKEQESVGVNCILQLHKTLYDGN 475

Query: 361 GGALRDFLGLIRSTNPMVVL 420
           GGALRDFLGLIRSTNP +V+
Sbjct: 476 GGALRDFLGLIRSTNPSIVV 495


>ref|XP_004148280.1| PREDICTED: LOW QUALITY PROTEIN: scarecrow-like protein 28-like
           [Cucumis sativus]
          Length = 648

 Score =  251 bits (641), Expect = 4e-65
 Identities = 121/140 (86%), Positives = 132/140 (94%)
 Frame = +1

Query: 1   LHFTCNEMLLRSFEGKDRVHIIDFDIKQGLQWPSLFQSLASRSSPPSHVRITGIGESKKD 180
           +HFT NEMLLR+FEGKD+VHIIDFDIKQGLQWPSLFQSLASR++PPSHVRITGIGESK++
Sbjct: 356 IHFTANEMLLRAFEGKDKVHIIDFDIKQGLQWPSLFQSLASRANPPSHVRITGIGESKQE 415

Query: 181 LQETGDRLAGFAGALSLPFEFHAVVDRLEDVRLWMLHVKEKESVAVNCILQLHKMLYDES 360
           L ETGDRLAGFA AL LPFEFHAVVDRLEDVRLWMLHVKE+ESV VNCILQLHK LYD +
Sbjct: 416 LNETGDRLAGFAEALRLPFEFHAVVDRLEDVRLWMLHVKEQESVGVNCILQLHKTLYDGN 475

Query: 361 GGALRDFLGLIRSTNPMVVL 420
           GGALRDFLGLIRSTNP +V+
Sbjct: 476 GGALRDFLGLIRSTNPSIVV 495


>ref|XP_002303565.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222840997|gb|EEE78544.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 665

 Score =  249 bits (637), Expect = 1e-64
 Identities = 119/140 (85%), Positives = 131/140 (93%)
 Frame = +1

Query: 1   LHFTCNEMLLRSFEGKDRVHIIDFDIKQGLQWPSLFQSLASRSSPPSHVRITGIGESKKD 180
           +HFT NEMLLR+FEGKDRVHIIDFDI+QGLQWPSLFQSLASR++PPSHVRITGIGESK++
Sbjct: 375 IHFTANEMLLRAFEGKDRVHIIDFDIRQGLQWPSLFQSLASRTNPPSHVRITGIGESKQE 434

Query: 181 LQETGDRLAGFAGALSLPFEFHAVVDRLEDVRLWMLHVKEKESVAVNCILQLHKMLYDES 360
           L ETGDRLAGFA AL+LPFEFH VVDRLEDVRLWMLHVKE+E VA+NCI Q+HK LYD S
Sbjct: 435 LNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKERECVAINCIFQMHKTLYDGS 494

Query: 361 GGALRDFLGLIRSTNPMVVL 420
           GGALRDFLGLIRSTNP +VL
Sbjct: 495 GGALRDFLGLIRSTNPTIVL 514


>ref|XP_002299559.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222846817|gb|EEE84364.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 666

 Score =  248 bits (634), Expect = 3e-64
 Identities = 117/140 (83%), Positives = 131/140 (93%)
 Frame = +1

Query: 1   LHFTCNEMLLRSFEGKDRVHIIDFDIKQGLQWPSLFQSLASRSSPPSHVRITGIGESKKD 180
           +HFT NEMLLR+FEGKDRVHIIDFDIKQGLQWP+LFQSLASR++PPSHVRITGIGESK++
Sbjct: 376 IHFTANEMLLRAFEGKDRVHIIDFDIKQGLQWPTLFQSLASRTNPPSHVRITGIGESKQE 435

Query: 181 LQETGDRLAGFAGALSLPFEFHAVVDRLEDVRLWMLHVKEKESVAVNCILQLHKMLYDES 360
           L ETGDRLAGFA AL+LPFEFH VVDRLEDVRLWMLHVKE+E VA+NC+ Q+HK LYD S
Sbjct: 436 LNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKERECVAINCVFQMHKTLYDGS 495

Query: 361 GGALRDFLGLIRSTNPMVVL 420
           GGALRDFLGLIRSTNP +V+
Sbjct: 496 GGALRDFLGLIRSTNPAIVI 515


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