BLASTX nr result

ID: Coptis23_contig00026817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026817
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_002311067.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002329291.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]   102   2e-20
ref|XP_002512884.1| serine-threonine protein kinase, plant-type,...   102   3e-20

>ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|222850885|gb|EEE88432.1|
           predicted protein [Populus trichocarpa]
          Length = 1032

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/97 (57%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
 Frame = -2

Query: 285 PLLHATLLWSISLAVLRLSKANF--IGNETDRLALLAFKSQITGDLYNVTSSWNDSNHFC 112
           P + + LLW +   V+ LS ++   IGNETDRL+LLAFK QI  D     SSWNDS+HFC
Sbjct: 4   PSMGSCLLWPLIFQVIHLSLSSSLPIGNETDRLSLLAFKDQIEADPLGTLSSWNDSSHFC 63

Query: 111 DWEGVTCSNRHQRVTVLNLASKGLVGPISTHIGNLSF 1
           +W GVTC  RHQRV  L+L S  LVG +S HIGNLSF
Sbjct: 64  EWSGVTCGRRHQRVVELDLNSCKLVGSLSPHIGNLSF 100


>ref|XP_002311067.1| predicted protein [Populus trichocarpa] gi|222850887|gb|EEE88434.1|
           predicted protein [Populus trichocarpa]
          Length = 1025

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/98 (52%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
 Frame = -2

Query: 285 PLLHATLLWSISLAVLRLSKANFI---GNETDRLALLAFKSQITGDLYNVTSSWNDSNHF 115
           P + + +LW + L +++L     +   GNETDRL+LLA KSQIT D + + SSWN+S HF
Sbjct: 4   PGMSSCILWLLFLQIIQLPIPFSLPTGGNETDRLSLLALKSQITNDPFGMLSSWNESLHF 63

Query: 114 CDWEGVTCSNRHQRVTVLNLASKGLVGPISTHIGNLSF 1
           CDW GV C  RH+RV  ++L S  LVG +S HIGNLSF
Sbjct: 64  CDWSGVICGKRHRRVVEIDLHSAQLVGSLSPHIGNLSF 101


>ref|XP_002329291.1| predicted protein [Populus trichocarpa] gi|222870745|gb|EEF07876.1|
           predicted protein [Populus trichocarpa]
          Length = 1022

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/92 (56%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
 Frame = -2

Query: 267 LLWSISLAVLRLSKANFI---GNETDRLALLAFKSQITGDLYNVTSSWNDSNHFCDWEGV 97
           +LW I L +  L   +F    GNETD+L+LL FK+QITGD     SSWN+S+ FC W GV
Sbjct: 10  ILWPIFLQIYLLVSFSFSIYGGNETDKLSLLTFKAQITGDPLGKLSSWNESSQFCQWSGV 69

Query: 96  TCSNRHQRVTVLNLASKGLVGPISTHIGNLSF 1
           TC  RHQRV  L+L S  LVG +S HIGNLSF
Sbjct: 70  TCGRRHQRVVELDLHSYQLVGSLSPHIGNLSF 101


>emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]
          Length = 1904

 Score =  102 bits (255), Expect = 2e-20
 Identities = 48/71 (67%), Positives = 56/71 (78%)
 Frame = -2

Query: 213 GNETDRLALLAFKSQITGDLYNVTSSWNDSNHFCDWEGVTCSNRHQRVTVLNLASKGLVG 34
           GNETDRLALLA K+QIT D   +T+SWNDS HFC+W GVTC +RHQRV  LNL+S  LVG
Sbjct: 67  GNETDRLALLAIKAQITQDPLGITTSWNDSVHFCNWTGVTCGHRHQRVNTLNLSSLHLVG 126

Query: 33  PISTHIGNLSF 1
            +S  IGNL+F
Sbjct: 127 SLSPSIGNLTF 137



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/56 (67%), Positives = 40/56 (71%)
 Frame = -2

Query: 168  ITGDLYNVTSSWNDSNHFCDWEGVTCSNRHQRVTVLNLASKGLVGPISTHIGNLSF 1
            IT       SSWNDS HFC W+GV+CS RHQRVTVLNL S GLVG I   IGNLSF
Sbjct: 1064 ITDAPLRAMSSWNDSLHFCQWQGVSCSGRHQRVTVLNLHSLGLVGSIPPLIGNLSF 1119


>ref|XP_002512884.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223547895|gb|EEF49387.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 600

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/76 (61%), Positives = 56/76 (73%)
 Frame = -2

Query: 228 KANFIGNETDRLALLAFKSQITGDLYNVTSSWNDSNHFCDWEGVTCSNRHQRVTVLNLAS 49
           +AN  GNETDRLALL FK  I+ D + + +SWNDS HFC W G+TC  RHQRVT L+L  
Sbjct: 28  QANASGNETDRLALLKFKQGISSDPHGIFNSWNDSLHFCKWYGITCGRRHQRVTSLDLKG 87

Query: 48  KGLVGPISTHIGNLSF 1
           + L+G IS HIGNLSF
Sbjct: 88  QNLIGSISPHIGNLSF 103


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