BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026812
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256...   234   1e-59
ref|XP_002324772.1| predicted protein [Populus trichocarpa] gi|2...   212   5e-53
ref|XP_002514634.1| conserved hypothetical protein [Ricinus comm...   202   6e-50
ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arab...   198   8e-49
ref|NP_565080.1| Mitochondrial transcription termination factor ...   192   3e-47

>ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256963 [Vitis vinifera]
           gi|297734077|emb|CBI15324.3| unnamed protein product
           [Vitis vinifera]
          Length = 451

 Score =  234 bits (597), Expect = 1e-59
 Identities = 114/212 (53%), Positives = 160/212 (75%)
 Frame = +3

Query: 3   FPPTNVNDFLEKNKFLLNFSLLDVEKSLGILLSFKLTQKSLVSVLTSCPGVLELGFLKKW 182
           FPP+ ++ FL+KN+   N++LL++EKSLGIL SF++ QK ++S+++ CP +LE  FLKKW
Sbjct: 61  FPPSQLHGFLKKNQIFQNYNLLELEKSLGILFSFQIPQKFILSLISDCPRLLEFEFLKKW 120

Query: 183 ENGFSELGVSNVSTMLIQSVLEHSRKLHIEPSDVCMCLRGLKGLGFSDETVVKILEGFPR 362
           E G ++LGVS VS ++I++VLE SR+  ++P DV  C++ LKGLGFSD TV +ILE FPR
Sbjct: 121 EMGIAKLGVSGVSPLMIRNVLEFSRRFELDPDDVSRCVKVLKGLGFSDGTVDRILEEFPR 180

Query: 363 VIIVRLRDVEGRIEFLKGLRISWREIDGICYSFPLVLGLGVEERLKPLFKEFGSLGFDGN 542
           VI+    +++ +I+FL G+ I    IDGI +S P +LGLG+E+RL+PL  EFG LGF  +
Sbjct: 181 VIMSNESEIQRKIQFLLGIGIPESGIDGIFHSLPGILGLGIEDRLEPLLDEFGKLGFSED 240

Query: 543 VVRNEIIVNPEILGMEVGELSRCLELLKGLKC 638
           VVR EI   P +LGME+GE+SRCLEL+  LKC
Sbjct: 241 VVRREISREPRMLGMELGEMSRCLELVGTLKC 272


>ref|XP_002324772.1| predicted protein [Populus trichocarpa] gi|222866206|gb|EEF03337.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  212 bits (539), Expect = 5e-53
 Identities = 110/213 (51%), Positives = 144/213 (67%), Gaps = 1/213 (0%)
 Frame = +3

Query: 3   FPPTNVNDFLEKNKFLLNFSLLDVEKSLGILLS-FKLTQKSLVSVLTSCPGVLELGFLKK 179
           FPP+ +  FL +N FLLN +L D EKSLG+L S FK+  KS+VS++  CPGVL+  FLK+
Sbjct: 20  FPPSQLQTFLSRNHFLLNSNLHDTEKSLGMLTSSFKIPHKSVVSLIIDCPGVLDFDFLKR 79

Query: 180 WENGFSELGVSNVSTMLIQSVLEHSRKLHIEPSDVCMCLRGLKGLGFSDETVVKILEGFP 359
           WE G S+     V  +LI++VLEHS+K  I+P      L+ LKGLGFS+ T  ++LEGFP
Sbjct: 80  WEFGLSKFADLGVPPLLIKTVLEHSKKFQIDPDRFNETLKVLKGLGFSESTTRRVLEGFP 139

Query: 360 RVIIVRLRDVEGRIEFLKGLRISWREIDGICYSFPLVLGLGVEERLKPLFKEFGSLGFDG 539
            VI ++  ++  RI+FL  + I    +D +  SFP VLG G+E RL PL  EF  LGF  
Sbjct: 140 GVIALKECEIHRRIQFLMAIGIPRDGVDRVFNSFPEVLGFGIENRLMPLLNEFKDLGFSE 199

Query: 540 NVVRNEIIVNPEILGMEVGELSRCLELLKGLKC 638
            +VR EII  P ILGMEVGELSRCL+L++ LKC
Sbjct: 200 ELVRKEIIREPRILGMEVGELSRCLDLIRSLKC 232


>ref|XP_002514634.1| conserved hypothetical protein [Ricinus communis]
           gi|223546238|gb|EEF47740.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 450

 Score =  202 bits (513), Expect = 6e-50
 Identities = 104/212 (49%), Positives = 141/212 (66%)
 Frame = +3

Query: 3   FPPTNVNDFLEKNKFLLNFSLLDVEKSLGILLSFKLTQKSLVSVLTSCPGVLELGFLKKW 182
           FPP+ ++ F+  N FLLN +L D+EKSLGILLSFK+ QK LVS++T CP +L+  FLK W
Sbjct: 59  FPPSQLHSFISANHFLLNSNLHDIEKSLGILLSFKIPQKVLVSLITECPSILDFEFLKTW 118

Query: 183 ENGFSELGVSNVSTMLIQSVLEHSRKLHIEPSDVCMCLRGLKGLGFSDETVVKILEGFPR 362
           +  FS+    ++S ++I+SVL HS++  I+P +       LKGL FS  T+ ++LE FP 
Sbjct: 119 KICFSKYRDLSISPLVIKSVLAHSKRFQIDPDEFEKNANVLKGLSFSQGTIRRVLEDFPG 178

Query: 363 VIIVRLRDVEGRIEFLKGLRISWREIDGICYSFPLVLGLGVEERLKPLFKEFGSLGFDGN 542
           VI ++  ++  RIEFL    I   E++ I  SFPL LG G++ RL PL  EF  LGF   
Sbjct: 179 VITMKRSEIYSRIEFLMRTGIPKDEVESIFSSFPLALGFGIKNRLMPLIDEFEGLGFSRE 238

Query: 543 VVRNEIIVNPEILGMEVGELSRCLELLKGLKC 638
           +V  EI   P+ILGME+GELSRCL+LL  LKC
Sbjct: 239 LVIKEIKKEPQILGMELGELSRCLDLLNSLKC 270


>ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arabidopsis lyrata subsp.
           lyrata] gi|297334807|gb|EFH65225.1| hypothetical protein
           ARALYDRAFT_476555 [Arabidopsis lyrata subsp. lyrata]
          Length = 449

 Score =  198 bits (503), Expect = 8e-49
 Identities = 102/212 (48%), Positives = 136/212 (64%)
 Frame = +3

Query: 3   FPPTNVNDFLEKNKFLLNFSLLDVEKSLGILLSFKLTQKSLVSVLTSCPGVLELGFLKKW 182
           FPP+++  FL +N  LLN  L++ E SLGILLS K+ QKSLVS++  CP VL   FL+KW
Sbjct: 58  FPPSSLQHFLSRNNHLLNLDLVETEASLGILLSLKIPQKSLVSLICDCPNVLRSEFLRKW 117

Query: 183 ENGFSELGVSNVSTMLIQSVLEHSRKLHIEPSDVCMCLRGLKGLGFSDETVVKILEGFPR 362
                + G   VS+  I+SVLEHS ++ I P     C+R LKGLGF D TV +IL  FP 
Sbjct: 118 RVPLFDCGKHGVSSSAIKSVLEHSSRIGIGPDKFYECIRVLKGLGFCDSTVSRILSSFPG 177

Query: 363 VIIVRLRDVEGRIEFLKGLRISWREIDGICYSFPLVLGLGVEERLKPLFKEFGSLGFDGN 542
           V++V   ++  +IEFL G+ I    I+   + FP VLG+G E RLKPL  EF  +GF  +
Sbjct: 178 VLLVNEIEIHRKIEFLVGIDIPRDNIERFFHVFPEVLGIGTETRLKPLLDEFIKMGFSKD 237

Query: 543 VVRNEIIVNPEILGMEVGELSRCLELLKGLKC 638
            ++ EI   P +LG+E+GEL RCLEL+  LKC
Sbjct: 238 DIKEEIAREPRVLGLELGELPRCLELINTLKC 269


>ref|NP_565080.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana]
           gi|12323819|gb|AAG51878.1|AC079678_8 unknown protein;
           33994-35331 [Arabidopsis thaliana]
           gi|332197431|gb|AEE35552.1| Mitochondrial transcription
           termination factor family protein [Arabidopsis thaliana]
          Length = 445

 Score =  192 bits (489), Expect = 3e-47
 Identities = 103/213 (48%), Positives = 137/213 (64%), Gaps = 1/213 (0%)
 Frame = +3

Query: 3   FPPTNVNDFLEKNKFLLNFSLLDVEKSLGILLSFKLTQKSLVSVLTSCPGVLELGFLKKW 182
           FPP+++  FL +N  LLN  L++ E SLGILLS K+ QKSLVS+++ CP VL   FL+KW
Sbjct: 53  FPPSSLQHFLSRNNHLLNSDLVETEISLGILLSLKIPQKSLVSLISDCPNVLRSEFLRKW 112

Query: 183 ENGFSELGVSNV-STMLIQSVLEHSRKLHIEPSDVCMCLRGLKGLGFSDETVVKILEGFP 359
               S  G   V S+  I+SVLEHS ++ I P     C+R LK LGF D TV +IL  FP
Sbjct: 113 RVPLSNCGKHGVVSSSAIKSVLEHSSRIGIGPDKFNECVRVLKSLGFCDSTVSRILSSFP 172

Query: 360 RVIIVRLRDVEGRIEFLKGLRISWREIDGICYSFPLVLGLGVEERLKPLFKEFGSLGFDG 539
            V++V   ++  +IEFL G+ I+   I+   + FP VLG+G E RLKPL  EF  +GF  
Sbjct: 173 GVLLVNEIEIRRKIEFLVGIGIARDNIERFFHVFPEVLGIGTETRLKPLLDEFMKMGFSK 232

Query: 540 NVVRNEIIVNPEILGMEVGELSRCLELLKGLKC 638
           + V+ EI   P +LG+E+GEL RCLEL+  LKC
Sbjct: 233 DDVKKEIAREPRVLGLELGELPRCLELINTLKC 265