BLASTX nr result

ID: Coptis23_contig00026805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026805
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272547.1| PREDICTED: uncharacterized protein LOC100250...   160   5e-37
ref|XP_003524114.1| PREDICTED: uncharacterized protein LOC100790...   144   3e-32
ref|XP_003608488.1| hypothetical protein MTR_4g096650 [Medicago ...   142   1e-31
ref|XP_003532652.1| PREDICTED: uncharacterized protein LOC100819...   136   8e-30
ref|XP_003608489.1| hypothetical protein MTR_4g096650 [Medicago ...   131   2e-28

>ref|XP_002272547.1| PREDICTED: uncharacterized protein LOC100250429 [Vitis vinifera]
           gi|297740664|emb|CBI30846.3| unnamed protein product
           [Vitis vinifera]
          Length = 356

 Score =  160 bits (404), Expect = 5e-37
 Identities = 75/114 (65%), Positives = 96/114 (84%)
 Frame = -3

Query: 864 QVAGLAIVCVVCFTSSAVVALSTNIPLLYHWHPRDVNGILTSILVFLYYFIGSSVPSAYV 685
           +VAGLA+V V+CFTSSA VAL T+IP+LYHWHP+ VNG+ TS+L+ LYYFIGSSVPSA+V
Sbjct: 243 KVAGLAVVSVICFTSSAFVALFTDIPMLYHWHPQPVNGVSTSLLLILYYFIGSSVPSAFV 302

Query: 684 LWIMRELPPAVAVDSERQSSIVTFMSDTTAAMHDSQRWTTATSSQNQASRASPI 523
           LW+MRELPP++      +S  VTF+SD++ +++  QRW+TATSSQNQ SRASPI
Sbjct: 303 LWVMRELPPSITTVIYVESRPVTFISDSSESVNHPQRWSTATSSQNQISRASPI 356


>ref|XP_003524114.1| PREDICTED: uncharacterized protein LOC100790769 [Glycine max]
          Length = 355

 Score =  144 bits (363), Expect = 3e-32
 Identities = 66/114 (57%), Positives = 87/114 (76%)
 Frame = -3

Query: 864 QVAGLAIVCVVCFTSSAVVALSTNIPLLYHWHPRDVNGILTSILVFLYYFIGSSVPSAYV 685
           +VAGL IV V+CFTSS+ V L T+IP+ Y+WH R +N + +S+L+ LYYF+GSS+PSA V
Sbjct: 242 KVAGLTIVSVICFTSSSCVELLTDIPMQYNWHQRRLNDVYSSLLLILYYFVGSSIPSAVV 301

Query: 684 LWIMRELPPAVAVDSERQSSIVTFMSDTTAAMHDSQRWTTATSSQNQASRASPI 523
           LW+MRELPP  A     +SS + F++D++ A+H  QRW TATS QNQ SRASPI
Sbjct: 302 LWVMRELPPEEAASIPEESSTIAFVADSSIAIHHPQRWATATSMQNQTSRASPI 355


>ref|XP_003608488.1| hypothetical protein MTR_4g096650 [Medicago truncatula]
           gi|355509543|gb|AES90685.1| hypothetical protein
           MTR_4g096650 [Medicago truncatula]
          Length = 254

 Score =  142 bits (357), Expect = 1e-31
 Identities = 63/114 (55%), Positives = 88/114 (77%)
 Frame = -3

Query: 864 QVAGLAIVCVVCFTSSAVVALSTNIPLLYHWHPRDVNGILTSILVFLYYFIGSSVPSAYV 685
           +VAGL IV V+CFTSS+ + L T+IP+++HWH + +N +  S+L+ LY+F+GSS+PSA V
Sbjct: 141 KVAGLTIVSVLCFTSSSCIELFTDIPMMFHWHQQRMNDVYASLLLILYFFVGSSIPSAVV 200

Query: 684 LWIMRELPPAVAVDSERQSSIVTFMSDTTAAMHDSQRWTTATSSQNQASRASPI 523
           LW+MRELPPA A D   +SS + F+++++ A H  + WTTATS QNQ SRASPI
Sbjct: 201 LWVMRELPPAEAADVVEESSTIAFVANSSVAAHHPRSWTTATSMQNQTSRASPI 254


>ref|XP_003532652.1| PREDICTED: uncharacterized protein LOC100819031 [Glycine max]
          Length = 351

 Score =  136 bits (342), Expect = 8e-30
 Identities = 62/109 (56%), Positives = 84/109 (77%)
 Frame = -3

Query: 864 QVAGLAIVCVVCFTSSAVVALSTNIPLLYHWHPRDVNGILTSILVFLYYFIGSSVPSAYV 685
           +VAGL IV V+CFTSS+ V L T+IP+ Y+WH R +N + +S+L+ LYYF+GSS+PSA V
Sbjct: 242 KVAGLTIVSVLCFTSSSCVELLTDIPMQYNWHLRRLNDVYSSLLLILYYFVGSSIPSALV 301

Query: 684 LWIMRELPPAVAVDSERQSSIVTFMSDTTAAMHDSQRWTTATSSQNQAS 538
           LW+MRELPP  A     +SS + F++D++ A+H  QRWTTATS QNQA+
Sbjct: 302 LWVMRELPPEEAASISEESSTIAFVADSSIAIHHPQRWTTATSMQNQAA 350


>ref|XP_003608489.1| hypothetical protein MTR_4g096650 [Medicago truncatula]
           gi|355509544|gb|AES90686.1| hypothetical protein
           MTR_4g096650 [Medicago truncatula]
          Length = 247

 Score =  131 bits (329), Expect = 2e-28
 Identities = 57/107 (53%), Positives = 82/107 (76%)
 Frame = -3

Query: 864 QVAGLAIVCVVCFTSSAVVALSTNIPLLYHWHPRDVNGILTSILVFLYYFIGSSVPSAYV 685
           +VAGL IV V+CFTSS+ + L T+IP+++HWH + +N +  S+L+ LY+F+GSS+PSA V
Sbjct: 141 KVAGLTIVSVLCFTSSSCIELFTDIPMMFHWHQQRMNDVYASLLLILYFFVGSSIPSAVV 200

Query: 684 LWIMRELPPAVAVDSERQSSIVTFMSDTTAAMHDSQRWTTATSSQNQ 544
           LW+MRELPPA A D   +SS + F+++++ A H  + WTTATS QNQ
Sbjct: 201 LWVMRELPPAEAADVVEESSTIAFVANSSVAAHHPRSWTTATSMQNQ 247


Top