BLASTX nr result

ID: Coptis23_contig00026787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026787
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40972.1| unknown [Medicago truncatula]                           86   3e-15
ref|XP_003607709.1| C2H2 zinc finger protein [Medicago truncatul...    86   3e-15
ref|XP_003607708.1| C2H2 zinc finger protein [Medicago truncatul...    86   3e-15
ref|NP_001240057.1| uncharacterized protein LOC100787790 [Glycin...    86   4e-15
ref|XP_002282818.2| PREDICTED: uncharacterized protein LOC100260...    82   6e-14

>gb|AFK40972.1| unknown [Medicago truncatula]
          Length = 437

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 53/125 (42%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
 Frame = +3

Query: 3   TGFINGTNEGGCGSNAGS------TFVGTLRXXXXXXXXSHTMHPQCPPFMXXXXXXXXX 164
           TGF  G N GG  ++ GS      T+VGTLR          TMH   P F          
Sbjct: 109 TGFQEGINGGGNNASGGSSSGGSSTYVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKS 168

Query: 165 XXXLTNGRRSRLKTSATFGDAGLSSNFKSSYAVSSNGSSIVTCPKCREQFRKWEAAEAHH 344
              L+ G      ++   G  G+ S+ + S    SNGSS VTC KC EQF KWEAAEAHH
Sbjct: 169 PFLLSEG------SNGFHGGGGVHSSNRMSLETDSNGSSTVTCHKCGEQFNKWEAAEAHH 222

Query: 345 LSKHA 359
           LSKHA
Sbjct: 223 LSKHA 227


>ref|XP_003607709.1| C2H2 zinc finger protein [Medicago truncatula]
           gi|355508764|gb|AES89906.1| C2H2 zinc finger protein
           [Medicago truncatula]
          Length = 231

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 53/125 (42%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
 Frame = +3

Query: 3   TGFINGTNEGGCGSNAGS------TFVGTLRXXXXXXXXSHTMHPQCPPFMXXXXXXXXX 164
           TGF  G N GG  ++ GS      T+VGTLR          TMH   P F          
Sbjct: 109 TGFQEGINGGGNNASGGSSSGGSSTYVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKS 168

Query: 165 XXXLTNGRRSRLKTSATFGDAGLSSNFKSSYAVSSNGSSIVTCPKCREQFRKWEAAEAHH 344
              L+ G      ++   G  G+ S+ + S    SNGSS VTC KC EQF KWEAAEAHH
Sbjct: 169 PFLLSEG------SNGFHGGGGVHSSNRMSLETDSNGSSTVTCHKCGEQFNKWEAAEAHH 222

Query: 345 LSKHA 359
           LSKHA
Sbjct: 223 LSKHA 227


>ref|XP_003607708.1| C2H2 zinc finger protein [Medicago truncatula]
           gi|358345288|ref|XP_003636713.1| C2H2 zinc finger
           protein [Medicago truncatula]
           gi|355502648|gb|AES83851.1| C2H2 zinc finger protein
           [Medicago truncatula] gi|355508763|gb|AES89905.1| C2H2
           zinc finger protein [Medicago truncatula]
          Length = 437

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 53/125 (42%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
 Frame = +3

Query: 3   TGFINGTNEGGCGSNAGS------TFVGTLRXXXXXXXXSHTMHPQCPPFMXXXXXXXXX 164
           TGF  G N GG  ++ GS      T+VGTLR          TMH   P F          
Sbjct: 109 TGFQEGINGGGNNASGGSSSGGSSTYVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKS 168

Query: 165 XXXLTNGRRSRLKTSATFGDAGLSSNFKSSYAVSSNGSSIVTCPKCREQFRKWEAAEAHH 344
              L+ G      ++   G  G+ S+ + S    SNGSS VTC KC EQF KWEAAEAHH
Sbjct: 169 PFLLSEG------SNGFHGGGGVHSSNRMSLETDSNGSSTVTCHKCGEQFNKWEAAEAHH 222

Query: 345 LSKHA 359
           LSKHA
Sbjct: 223 LSKHA 227


>ref|NP_001240057.1| uncharacterized protein LOC100787790 [Glycine max]
           gi|255636705|gb|ACU18688.1| unknown [Glycine max]
          Length = 441

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 57/120 (47%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
 Frame = +3

Query: 18  GTNEGGCGSNAG--STFVGTLRXXXXXXXXSHTMHPQCPPFMXXXXXXXXXXXXLTNGRR 191
           G   GG GSNAG  STFVGTLR          TMH   P F              T  R+
Sbjct: 122 GVGSGGGGSNAGGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSS----------TPPRK 171

Query: 192 SRLKTSATFGD----AGLSSNFKSSYAVSSNGSSIVTCPKCREQFRKWEAAEAHHLSKHA 359
           S   +S   G     AGL S+ + S    SNGSS VTC KC EQF KW+AAEAHHLSKHA
Sbjct: 172 SPFLSSDKEGSGPHGAGLHSSNRLSLETDSNGSSTVTCHKCGEQFNKWDAAEAHHLSKHA 231


>ref|XP_002282818.2| PREDICTED: uncharacterized protein LOC100260605 [Vitis vinifera]
          Length = 483

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 51/120 (42%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
 Frame = +3

Query: 18  GTNEGGCGSNAGSTFVGTLRXXXXXXXXSHTMH----PQCPPFMXXXXXXXXXXXXLTNG 185
           G   GG G+  GSTFVGTLR          TMH    P  PP              L++ 
Sbjct: 162 GGGGGGVGTGGGSTFVGTLRPGTPGPGGHPTMHYFKSPSTPP--------RKSPFLLSDR 213

Query: 186 RRSRLKTSATFG--DAGLSSNFKSSYAVSSNGSSIVTCPKCREQFRKWEAAEAHHLSKHA 359
             S    S  FG     + SN ++S    SNG+S VTC KC EQF KWEA E HHLSKHA
Sbjct: 214 EGSGFGGSTIFGGGSGAIHSNNRASLDTDSNGTSAVTCHKCGEQFSKWEAVETHHLSKHA 273


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