BLASTX nr result
ID: Coptis23_contig00026777
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00026777 (269 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAG00881.1|AC064840_12 lipoxygenase - partial coding sequence... 62 4e-08 ref|NP_175900.1| lipoxygenase 1 [Arabidopsis thaliana] gi|547867... 62 4e-08 ref|XP_002319014.1| predicted protein [Populus trichocarpa] gi|2... 61 8e-08 emb|CCD74473.1| lipoxygenase 1, partial [Arabidopsis halleri sub... 59 3e-07 ref|XP_002891934.1| hypothetical protein ARALYDRAFT_474776 [Arab... 59 3e-07 >gb|AAG00881.1|AC064840_12 lipoxygenase - partial coding sequence [Arabidopsis thaliana] Length = 391 Score = 62.4 bits (150), Expect = 4e-08 Identities = 33/57 (57%), Positives = 44/57 (77%) Frame = +3 Query: 96 LFFQLRDLIKGRDGKNRLEGGTSVKKIQGSVVLMKKNVLDFNDFHATVLDTVNEFLG 266 +F +LRDL+ G G N T+ KK++G+VVLMKKNVLDFNDF+A+ LD ++EFLG Sbjct: 1 MFGELRDLLTG--GGNE----TTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLG 51 >ref|NP_175900.1| lipoxygenase 1 [Arabidopsis thaliana] gi|547867|sp|Q06327.1|LOX1_ARATH RecName: Full=Linoleate 9S-lipoxygenase 1; AltName: Full=Lipoxygenase 1; Short=AtLOX1 gi|12322167|gb|AAG51123.1|AC069144_20 lipoxygenase, putative [Arabidopsis thaliana] gi|289203|gb|AAA32827.1| lipoxygenase [Arabidopsis thaliana] gi|436920|gb|AAA17036.1| lipoxygenase 1 [Arabidopsis thaliana] gi|20260410|gb|AAM13103.1| lipoxygenase, putative [Arabidopsis thaliana] gi|34098837|gb|AAQ56801.1| At1g55020 [Arabidopsis thaliana] gi|332195054|gb|AEE33175.1| lipoxygenase 1 [Arabidopsis thaliana] Length = 859 Score = 62.4 bits (150), Expect = 4e-08 Identities = 33/57 (57%), Positives = 44/57 (77%) Frame = +3 Query: 96 LFFQLRDLIKGRDGKNRLEGGTSVKKIQGSVVLMKKNVLDFNDFHATVLDTVNEFLG 266 +F +LRDL+ G G N T+ KK++G+VVLMKKNVLDFNDF+A+ LD ++EFLG Sbjct: 1 MFGELRDLLTG--GGNE----TTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLG 51 >ref|XP_002319014.1| predicted protein [Populus trichocarpa] gi|222857390|gb|EEE94937.1| predicted protein [Populus trichocarpa] Length = 871 Score = 61.2 bits (147), Expect = 8e-08 Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 2/60 (3%) Frame = +3 Query: 96 LFFQLRDLIKG-RDGKNRLE-GGTSVKKIQGSVVLMKKNVLDFNDFHATVLDTVNEFLGR 269 +F + D I G DG +L+ G KKI+G+VVLMKKNVL FNDFHA+VLD V+E LG+ Sbjct: 1 MFQNIIDAITGDSDGSKKLKCGDGECKKIKGTVVLMKKNVLGFNDFHASVLDRVHELLGQ 60 >emb|CCD74473.1| lipoxygenase 1, partial [Arabidopsis halleri subsp. halleri] Length = 381 Score = 59.3 bits (142), Expect = 3e-07 Identities = 30/54 (55%), Positives = 39/54 (72%) Frame = +3 Query: 105 QLRDLIKGRDGKNRLEGGTSVKKIQGSVVLMKKNVLDFNDFHATVLDTVNEFLG 266 +L DL+ G GG KK++G+VVLMKKNVLDFNDF+A+ LD ++EFLG Sbjct: 4 ELVDLLTG--------GGNETKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLG 49 >ref|XP_002891934.1| hypothetical protein ARALYDRAFT_474776 [Arabidopsis lyrata subsp. lyrata] gi|297337776|gb|EFH68193.1| hypothetical protein ARALYDRAFT_474776 [Arabidopsis lyrata subsp. lyrata] Length = 857 Score = 59.3 bits (142), Expect = 3e-07 Identities = 30/54 (55%), Positives = 39/54 (72%) Frame = +3 Query: 105 QLRDLIKGRDGKNRLEGGTSVKKIQGSVVLMKKNVLDFNDFHATVLDTVNEFLG 266 +L DL+ G GG KK++G+VVLMKKNVLDFNDF+A+ LD ++EFLG Sbjct: 4 ELVDLLTG--------GGNETKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLG 49