BLASTX nr result

ID: Coptis23_contig00026777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026777
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG00881.1|AC064840_12 lipoxygenase - partial coding sequence...    62   4e-08
ref|NP_175900.1| lipoxygenase 1 [Arabidopsis thaliana] gi|547867...    62   4e-08
ref|XP_002319014.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
emb|CCD74473.1| lipoxygenase 1, partial [Arabidopsis halleri sub...    59   3e-07
ref|XP_002891934.1| hypothetical protein ARALYDRAFT_474776 [Arab...    59   3e-07

>gb|AAG00881.1|AC064840_12 lipoxygenase - partial coding sequence [Arabidopsis thaliana]
          Length = 391

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/57 (57%), Positives = 44/57 (77%)
 Frame = +3

Query: 96  LFFQLRDLIKGRDGKNRLEGGTSVKKIQGSVVLMKKNVLDFNDFHATVLDTVNEFLG 266
           +F +LRDL+ G  G N     T+ KK++G+VVLMKKNVLDFNDF+A+ LD ++EFLG
Sbjct: 1   MFGELRDLLTG--GGNE----TTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLG 51


>ref|NP_175900.1| lipoxygenase 1 [Arabidopsis thaliana]
           gi|547867|sp|Q06327.1|LOX1_ARATH RecName: Full=Linoleate
           9S-lipoxygenase 1; AltName: Full=Lipoxygenase 1;
           Short=AtLOX1 gi|12322167|gb|AAG51123.1|AC069144_20
           lipoxygenase, putative [Arabidopsis thaliana]
           gi|289203|gb|AAA32827.1| lipoxygenase [Arabidopsis
           thaliana] gi|436920|gb|AAA17036.1| lipoxygenase 1
           [Arabidopsis thaliana] gi|20260410|gb|AAM13103.1|
           lipoxygenase, putative [Arabidopsis thaliana]
           gi|34098837|gb|AAQ56801.1| At1g55020 [Arabidopsis
           thaliana] gi|332195054|gb|AEE33175.1| lipoxygenase 1
           [Arabidopsis thaliana]
          Length = 859

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/57 (57%), Positives = 44/57 (77%)
 Frame = +3

Query: 96  LFFQLRDLIKGRDGKNRLEGGTSVKKIQGSVVLMKKNVLDFNDFHATVLDTVNEFLG 266
           +F +LRDL+ G  G N     T+ KK++G+VVLMKKNVLDFNDF+A+ LD ++EFLG
Sbjct: 1   MFGELRDLLTG--GGNE----TTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLG 51


>ref|XP_002319014.1| predicted protein [Populus trichocarpa] gi|222857390|gb|EEE94937.1|
           predicted protein [Populus trichocarpa]
          Length = 871

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
 Frame = +3

Query: 96  LFFQLRDLIKG-RDGKNRLE-GGTSVKKIQGSVVLMKKNVLDFNDFHATVLDTVNEFLGR 269
           +F  + D I G  DG  +L+ G    KKI+G+VVLMKKNVL FNDFHA+VLD V+E LG+
Sbjct: 1   MFQNIIDAITGDSDGSKKLKCGDGECKKIKGTVVLMKKNVLGFNDFHASVLDRVHELLGQ 60


>emb|CCD74473.1| lipoxygenase 1, partial [Arabidopsis halleri subsp. halleri]
          Length = 381

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/54 (55%), Positives = 39/54 (72%)
 Frame = +3

Query: 105 QLRDLIKGRDGKNRLEGGTSVKKIQGSVVLMKKNVLDFNDFHATVLDTVNEFLG 266
           +L DL+ G        GG   KK++G+VVLMKKNVLDFNDF+A+ LD ++EFLG
Sbjct: 4   ELVDLLTG--------GGNETKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLG 49


>ref|XP_002891934.1| hypothetical protein ARALYDRAFT_474776 [Arabidopsis lyrata subsp.
           lyrata] gi|297337776|gb|EFH68193.1| hypothetical protein
           ARALYDRAFT_474776 [Arabidopsis lyrata subsp. lyrata]
          Length = 857

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/54 (55%), Positives = 39/54 (72%)
 Frame = +3

Query: 105 QLRDLIKGRDGKNRLEGGTSVKKIQGSVVLMKKNVLDFNDFHATVLDTVNEFLG 266
           +L DL+ G        GG   KK++G+VVLMKKNVLDFNDF+A+ LD ++EFLG
Sbjct: 4   ELVDLLTG--------GGNETKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLG 49


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