BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026763
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28088.3| unnamed protein product [Vitis vinifera]              245   3e-63
ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-...   245   3e-63
ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative...   233   1e-59
emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]   232   3e-59
ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|2...   230   8e-59

>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  245 bits (625), Expect = 3e-63
 Identities = 116/136 (85%), Positives = 129/136 (94%)
 Frame = +3

Query: 3   QKQYWSVKCRYMDVVLFFKVGKFYELYEIDAEIGHKELDWKMTFSGVGKCRQVGISESGI 182
           QKQYWS+KC+YMDVVLFFKVGKFYELYE+DAEIGHKELDWKMTFSGVGKCRQVGISESGI
Sbjct: 281 QKQYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSGVGKCRQVGISESGI 340

Query: 183 EDAVQKLVARGYKVGRMEQIETSDQAKSRGGATVIQRKLVNVVTPSTITDGNIGPDAVHL 362
           ++AVQKL+ARGYKVGRMEQ+ETS+QAK+RG  +VIQRKLV+VVTPST  DGNIGPDAVHL
Sbjct: 341 DEAVQKLIARGYKVGRMEQLETSEQAKARGSTSVIQRKLVHVVTPSTACDGNIGPDAVHL 400

Query: 363 LSIKEGNCKLENGSTV 410
           LS+KEGN  LENGS +
Sbjct: 401 LSVKEGNNILENGSVI 416


>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
          Length = 1122

 Score =  245 bits (625), Expect = 3e-63
 Identities = 116/136 (85%), Positives = 129/136 (94%)
 Frame = +3

Query: 3   QKQYWSVKCRYMDVVLFFKVGKFYELYEIDAEIGHKELDWKMTFSGVGKCRQVGISESGI 182
           QKQYWS+KC+YMDVVLFFKVGKFYELYE+DAEIGHKELDWKMTFSGVGKCRQVGISESGI
Sbjct: 279 QKQYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSGVGKCRQVGISESGI 338

Query: 183 EDAVQKLVARGYKVGRMEQIETSDQAKSRGGATVIQRKLVNVVTPSTITDGNIGPDAVHL 362
           ++AVQKL+ARGYKVGRMEQ+ETS+QAK+RG  +VIQRKLV+VVTPST  DGNIGPDAVHL
Sbjct: 339 DEAVQKLIARGYKVGRMEQLETSEQAKARGSTSVIQRKLVHVVTPSTACDGNIGPDAVHL 398

Query: 363 LSIKEGNCKLENGSTV 410
           LS+KEGN  LENGS +
Sbjct: 399 LSVKEGNNILENGSVI 414


>ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
           gi|223546788|gb|EEF48286.1| DNA mismatch repair protein
           MSH6-2, putative [Ricinus communis]
          Length = 1089

 Score =  233 bits (594), Expect = 1e-59
 Identities = 112/135 (82%), Positives = 125/135 (92%)
 Frame = +3

Query: 3   QKQYWSVKCRYMDVVLFFKVGKFYELYEIDAEIGHKELDWKMTFSGVGKCRQVGISESGI 182
           QKQYWSVK +YMDVVLFFKVGKFYELYE+DAEIGHKELDWK+T SGVGKCRQVGISESGI
Sbjct: 257 QKQYWSVKSQYMDVVLFFKVGKFYELYELDAEIGHKELDWKITLSGVGKCRQVGISESGI 316

Query: 183 EDAVQKLVARGYKVGRMEQIETSDQAKSRGGATVIQRKLVNVVTPSTITDGNIGPDAVHL 362
           +DAV+KLVARGYKVGR+EQ+ETS QAK+RG  +VIQRKLV V+TPST TDGNIGPDAVHL
Sbjct: 317 DDAVEKLVARGYKVGRIEQLETSVQAKARGANSVIQRKLVQVITPSTATDGNIGPDAVHL 376

Query: 363 LSIKEGNCKLENGST 407
           L++KEGN  L+NG T
Sbjct: 377 LALKEGNYGLDNGET 391


>emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
          Length = 1090

 Score =  232 bits (591), Expect = 3e-59
 Identities = 109/125 (87%), Positives = 121/125 (96%)
 Frame = +3

Query: 3   QKQYWSVKCRYMDVVLFFKVGKFYELYEIDAEIGHKELDWKMTFSGVGKCRQVGISESGI 182
           QKQYWS+KC+YMDVVLFFKVGKFYELYE+DAEIGHKELDWKMTFSGVGKCRQVGISESGI
Sbjct: 279 QKQYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSGVGKCRQVGISESGI 338

Query: 183 EDAVQKLVARGYKVGRMEQIETSDQAKSRGGATVIQRKLVNVVTPSTITDGNIGPDAVHL 362
           ++AVQKL+ARGYKVGRMEQ+ETS+QAK+RG  +VIQRKLV+VVTPST  DGNIGPDAVHL
Sbjct: 339 DEAVQKLIARGYKVGRMEQLETSEQAKARGSTSVIQRKLVHVVTPSTACDGNIGPDAVHL 398

Query: 363 LSIKE 377
           LS+KE
Sbjct: 399 LSVKE 403


>ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|222873240|gb|EEF10371.1|
           predicted protein [Populus trichocarpa]
          Length = 1107

 Score =  230 bits (587), Expect = 8e-59
 Identities = 111/135 (82%), Positives = 125/135 (92%)
 Frame = +3

Query: 3   QKQYWSVKCRYMDVVLFFKVGKFYELYEIDAEIGHKELDWKMTFSGVGKCRQVGISESGI 182
           QKQYW+VK +YMDV+LFFKVGKFYELYE+DAEIGHKELDWKMT SGVGKCRQVGISESGI
Sbjct: 269 QKQYWTVKSQYMDVLLFFKVGKFYELYELDAEIGHKELDWKMTLSGVGKCRQVGISESGI 328

Query: 183 EDAVQKLVARGYKVGRMEQIETSDQAKSRGGATVIQRKLVNVVTPSTITDGNIGPDAVHL 362
           +DAV+KLVARGYKVGR+EQ+ETSDQAKSRG  +VIQRKLV VVTPST T  N+GPDAVHL
Sbjct: 329 DDAVEKLVARGYKVGRVEQLETSDQAKSRGANSVIQRKLVQVVTPSTTTGHNMGPDAVHL 388

Query: 363 LSIKEGNCKLENGST 407
           L+IKEGN  ++NG+T
Sbjct: 389 LAIKEGNYGVDNGAT 403