BLASTX nr result

ID: Coptis23_contig00026750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026750
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273910.2| PREDICTED: UPF0565 protein C2orf69 homolog [...   246   5e-63
ref|XP_002511597.1| conserved hypothetical protein [Ricinus comm...   218   1e-54
ref|XP_004133784.1| PREDICTED: uncharacterized protein LOC101223...   204   2e-50
ref|XP_002302492.1| predicted protein [Populus trichocarpa] gi|2...   203   5e-50
dbj|BAE99681.1| hypothetical protein [Arabidopsis thaliana]           201   2e-49

>ref|XP_002273910.2| PREDICTED: UPF0565 protein C2orf69 homolog [Vitis vinifera]
           gi|147864514|emb|CAN82628.1| hypothetical protein
           VITISV_028129 [Vitis vinifera]
           gi|297734607|emb|CBI16658.3| unnamed protein product
           [Vitis vinifera]
          Length = 322

 Score =  246 bits (629), Expect = 5e-63
 Identities = 134/236 (56%), Positives = 165/236 (69%)
 Frame = +2

Query: 290 MERWAGLLRVKINPHSGPLFXXXXXXXXXXXXXXXXXXXXNAIFFTGDKVEGTGNSVIER 469
           M+RW+G+L+V ++P S  L+                    NAIFF GD+V+GTGNSVIER
Sbjct: 1   MDRWSGVLKVPLHPSSRVLYRVAASLCLSPTSKTLIVPSANAIFFNGDRVQGTGNSVIER 60

Query: 470 LSNNRNIAEILVSKYSKLGVSVNAWVVEASVFNGPFAVYKEFIPCVNSWGEPKCYDHIAF 649
           LSN   IAEILVSK+   G SVNAWVVEAS FNGPFAVYK+FIP VN WG+PK Y    F
Sbjct: 61  LSNIEQIAEILVSKF---GGSVNAWVVEASTFNGPFAVYKDFIPSVNQWGDPKSYSPSGF 117

Query: 650 PASSSTVSLLSKCLEEVKKVINGGDRETSEVRVSTSFLHQAKTVVFGFSKGGTVLNQLLT 829
           PAS+STVSLLS CLEE KK I+G  +E   + +S S  +Q KT + GFSKGGTVLNQL+T
Sbjct: 118 PASTSTVSLLSNCLEEAKKAISGRQKEPCPLGLSASCSYQPKTFILGFSKGGTVLNQLVT 177

Query: 830 ELAHTKFQPPSNLVTKDMLRENCSEAWEESQVLPSSKESLLNSISEIHYVDVGLNS 997
           EL  +K    +++ +   ++E  S+  EE Q+LP+S ESLLNSI+EIHYVDVGLNS
Sbjct: 178 ELGFSKV---ASIRSSPHIKE--SDVQEEYQILPTSIESLLNSIAEIHYVDVGLNS 228


>ref|XP_002511597.1| conserved hypothetical protein [Ricinus communis]
           gi|223548777|gb|EEF50266.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 320

 Score =  218 bits (556), Expect = 1e-54
 Identities = 123/236 (52%), Positives = 160/236 (67%)
 Frame = +2

Query: 290 MERWAGLLRVKINPHSGPLFXXXXXXXXXXXXXXXXXXXXNAIFFTGDKVEGTGNSVIER 469
           ME W G+L+V ++  S                        NAIFF GD+VEGT N VIER
Sbjct: 1   MEYWRGVLKVPVDSSSRNYCRVAVSLCLSPNTRSPIVPCANAIFFCGDRVEGTNNPVIER 60

Query: 470 LSNNRNIAEILVSKYSKLGVSVNAWVVEASVFNGPFAVYKEFIPCVNSWGEPKCYDHIAF 649
           LS+ +NIA++LVSK+   G  VNAWV+EAS+FNGPFAVY++FIP VN WGEPK Y    F
Sbjct: 61  LSDPQNIAQVLVSKF---GAPVNAWVIEASIFNGPFAVYRDFIPSVNQWGEPKSYIPDEF 117

Query: 650 PASSSTVSLLSKCLEEVKKVINGGDRETSEVRVSTSFLHQAKTVVFGFSKGGTVLNQLLT 829
           PAS+ST+SLLS CL+E KK I+    +++   +++S   + KT + GFSKGGTVLNQL+ 
Sbjct: 118 PASTSTLSLLSNCLKEAKKAIS--TTKSTGRSLASSSCCEPKTYILGFSKGGTVLNQLVA 175

Query: 830 ELAHTKFQPPSNLVTKDMLRENCSEAWEESQVLPSSKESLLNSISEIHYVDVGLNS 997
           EL+ ++ Q  SN   + M+R  CS+  E+ Q++P SKESLLNSI+EIHYVDVGLNS
Sbjct: 176 ELSVSQVQ--SNTKEQQMIR-GCSD--EDVQIIPLSKESLLNSITEIHYVDVGLNS 226


>ref|XP_004133784.1| PREDICTED: uncharacterized protein LOC101223084 [Cucumis sativus]
           gi|449477990|ref|XP_004155186.1| PREDICTED:
           uncharacterized LOC101223084 [Cucumis sativus]
          Length = 325

 Score =  204 bits (520), Expect = 2e-50
 Identities = 117/238 (49%), Positives = 149/238 (62%), Gaps = 2/238 (0%)
 Frame = +2

Query: 290 MERWAGLLRVKINPHSGPLFXXXXXXXXXXXXXXXXXXXXNAIFFTGDKVEGTGNSVIER 469
           M+RW G+L+V +N +S   +                    NAIFF GD+VEGTGN VIER
Sbjct: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60

Query: 470 LSNNRNIAEILVSKYSKLGVSVNAWVVEASVFNGPFAVYKEFIPCVNSWGEPKCYDHIAF 649
           LSN +NIAEILVSK+   G S NAWVVEAS FNG FA+Y++FIP +N WGEPK Y    F
Sbjct: 61  LSNLQNIAEILVSKF---GDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGF 117

Query: 650 PASSSTVSLLSKCLEEVKKVINGGDRETSEVRVSTSFLHQAKTVVFGFSKGGTVLNQLLT 829
           PAS STVSLL  C  E   +++ G   + E  +ST      +T++ GFSKGGTV+NQL+T
Sbjct: 118 PASLSTVSLLGSCYNE---IVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVT 174

Query: 830 ELAHTKFQ-PPSNL-VTKDMLRENCSEAWEESQVLPSSKESLLNSISEIHYVDVGLNS 997
           EL          NL ++K      CS+  +E Q +P++ +S L SI+EIHYVDVGLNS
Sbjct: 175 ELGSKDLMAADENLPLSKQESGVECSKL-DEIQFVPTTGQSFLKSITEIHYVDVGLNS 231


>ref|XP_002302492.1| predicted protein [Populus trichocarpa] gi|222844218|gb|EEE81765.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  203 bits (517), Expect = 5e-50
 Identities = 121/242 (50%), Positives = 151/242 (62%), Gaps = 6/242 (2%)
 Frame = +2

Query: 290 MERWAGLLRVKINPHSGPLFXXXXXXXXXXXXXXXXXXXXNAIFFTGDKVEGTGNSVIER 469
           M+ W G+L+V   P S                        NAIFF GD+ EGT N VIER
Sbjct: 1   MDCWTGVLKVPFAPSSTSYCRVAVSLCLSTASKTLAVPSANAIFFNGDRAEGTKNPVIER 60

Query: 470 LSNNRNIAEILVSKYSKLGVSVNAWVVEASVFNGPFAVYKEFIPCVNSWGEPKCYDHIAF 649
           LS+ + I++ILVSK+   G  VNA+V+EA +FNGPFAVYK+FIP VN +GEPK Y+ + F
Sbjct: 61  LSDLQKISQILVSKF---GGCVNAYVIEAPLFNGPFAVYKDFIPSVNRYGEPKSYNPVGF 117

Query: 650 PASSSTVSLLSKCLEEVKKVINGGDRETSEVRVSTSFLHQAKTVVFGFSKGGTVLNQLLT 829
           PAS+STVS+L  CL+E KKVI    RE   +  S SF +Q KT + GFSKGGTVLNQL+ 
Sbjct: 118 PASNSTVSVLLNCLKEAKKVI--PRREQESLTDSVSF-NQPKTYILGFSKGGTVLNQLVA 174

Query: 830 EL------AHTKFQPPSNLVTKDMLRENCSEAWEESQVLPSSKESLLNSISEIHYVDVGL 991
           EL      +H K QP          R   S   E+ Q++P++KE LLNSISEIHY+DVGL
Sbjct: 175 ELGSLEVKSHMKPQP---------ARGEFSNVEEDIQIIPTTKEGLLNSISEIHYLDVGL 225

Query: 992 NS 997
           NS
Sbjct: 226 NS 227


>dbj|BAE99681.1| hypothetical protein [Arabidopsis thaliana]
          Length = 319

 Score =  201 bits (512), Expect = 2e-49
 Identities = 119/238 (50%), Positives = 153/238 (64%), Gaps = 2/238 (0%)
 Frame = +2

Query: 290 MERWAGLLRVKINPHSGPLFXXXXXXXXXXXXXXXXXXXXNAIFFTGDKVEGTGNSVIER 469
           MERW+G+LR+ ++  +   +                    NAIFF GDKV+ TGN VIER
Sbjct: 1   MERWSGVLRIPLDATTSNYYRVAASLCLSSSKTLTVPSA-NAIFFHGDKVQDTGNHVIER 59

Query: 470 LSNNRNIAEILVSKYSKLGVSVNAWVVEASVFNGPFAVYKEFIPCVNSWGEPKCYDHIAF 649
           L + + +AEI+VSK+   G SVNAWVVEASVFNGPFA+YK+F+P VN  G PK Y  + F
Sbjct: 60  LYDLQKVAEIIVSKF---GNSVNAWVVEASVFNGPFAIYKDFVPSVNHMGAPKSYSPVGF 116

Query: 650 PASSSTVSLLSKCLEEVKKVINGGDRETSEVRVSTSFLHQAKTVVFGFSKGGTVLNQLLT 829
           PASSS VSLLS CL EV K   G D     +    S  H  KT+V GFSKGG V+NQL++
Sbjct: 117 PASSSIVSLLSSCLHEVLK--EGTD--VCLIDQIASVHHCPKTIVLGFSKGGVVMNQLMS 172

Query: 830 ELA--HTKFQPPSNLVTKDMLRENCSEAWEESQVLPSSKESLLNSISEIHYVDVGLNS 997
           E++   T F   S+     M+ E+ S+  E+ Q++P+SKES LNSISE+HY+DVGLNS
Sbjct: 173 EISSLDTNFAKTSSA----MVEESTSQ-HEKIQIIPASKESFLNSISEVHYIDVGLNS 225


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