BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026747
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169939.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRN...    90   2e-16
ref|XP_004147167.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...    90   2e-16
ref|XP_002282340.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...    88   6e-16
ref|XP_002528338.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfe...    87   1e-15
ref|XP_003525222.1| PREDICTED: aspartyl/glutamyl-tRNA(Asn/Gln) a...    86   3e-15

>ref|XP_004169939.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRNA(Gln) amidotransferase
           subunit B, chloroplastic/mitochondrial-like [Cucumis
           sativus]
          Length = 556

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/63 (61%), Positives = 48/63 (76%)
 Frame = +3

Query: 138 QTQQPKPSNPNHKKPTNSKLLTNYESIIGIETHVQLSTQTKAFCSCPYTYGSQPNSNICP 317
           + Q+P   +P+  K    K+  +YE++IGIETHVQLST TKAFCSCPY YGS PN+NICP
Sbjct: 44  EKQRPMAISPHFDKQIIDKISKDYEAVIGIETHVQLSTLTKAFCSCPYNYGSSPNTNICP 103

Query: 318 ICM 326
           ICM
Sbjct: 104 ICM 106


>ref|XP_004147167.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit B,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 555

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/63 (61%), Positives = 48/63 (76%)
 Frame = +3

Query: 138 QTQQPKPSNPNHKKPTNSKLLTNYESIIGIETHVQLSTQTKAFCSCPYTYGSQPNSNICP 317
           + Q+P   +P+  K    K+  +YE++IGIETHVQLST TKAFCSCPY YGS PN+NICP
Sbjct: 44  EKQRPMAISPHFDKQIIDKISKDYEAVIGIETHVQLSTLTKAFCSCPYNYGSSPNTNICP 103

Query: 318 ICM 326
           ICM
Sbjct: 104 ICM 106


>ref|XP_002282340.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit B,
           chloroplastic/mitochondrial-like [Vitis vinifera]
          Length = 556

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/108 (46%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
 Frame = +3

Query: 27  MASICFKAIQTRPRPFFXXXXXXXXXXXXXXXXXXXXQTQQPKPSN--------PNHKKP 182
           MASI F+ +Q RP   +                    QT    P N        P  K  
Sbjct: 1   MASILFRGVQARPFLLYPSALFGRKSGVLYCTIKGT-QTHTAAPENKQPQLKVSPQTKAK 59

Query: 183 TNSKLLTNYESIIGIETHVQLSTQTKAFCSCPYTYGSQPNSNICPICM 326
              K+  +YE+IIGIETHVQLST TKAFCSCPY YGSQPN+ ICPICM
Sbjct: 60  VLDKISQDYEAIIGIETHVQLSTLTKAFCSCPYNYGSQPNTCICPICM 107


>ref|XP_002528338.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B,
           putative [Ricinus communis]
           gi|353558725|sp|B9SQR9.1|GATB_RICCO RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit B,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit B;
           Flags: Precursor gi|223532206|gb|EEF34010.1|
           Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit
           B, putative [Ricinus communis]
          Length = 549

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 50/107 (46%), Positives = 60/107 (56%), Gaps = 7/107 (6%)
 Frame = +3

Query: 27  MASICFKAIQTRP-----RPFFXXXXXXXXXXXXXXXXXXXXQTQQ-PKPS-NPNHKKPT 185
           MAS  F+ IQT P       FF                    + QQ P+   +P  +  +
Sbjct: 1   MASTLFRNIQTHPLLLYPTSFFRRKSSVFYCTVNSTSPTATQEKQQCPRIKVSPQTQSKS 60

Query: 186 NSKLLTNYESIIGIETHVQLSTQTKAFCSCPYTYGSQPNSNICPICM 326
             KL  +YE+IIGIETHVQLST TKAFCSCPY YG+QPNS ICP+CM
Sbjct: 61  LDKLTKDYETIIGIETHVQLSTLTKAFCSCPYNYGAQPNSTICPVCM 107


>ref|XP_003525222.1| PREDICTED: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit
           B-like [Glycine max]
          Length = 544

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/103 (44%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
 Frame = +3

Query: 27  MASICFKAIQTRP---RPFFXXXXXXXXXXXXXXXXXXXXQTQQPKPSNPNHKKPTNSKL 197
           MAS  F+++Q  P    P                       TQQ K +  + +     K+
Sbjct: 1   MASTIFRSLQVHPFLLYPTTFLRRRNEVFHLASKATQSQTDTQQTKVTTSSTQSKKLDKI 60

Query: 198 LTNYESIIGIETHVQLSTQTKAFCSCPYTYGSQPNSNICPICM 326
             +YE+IIGIETHVQLST TKAFC CPY+YGS PNS+ICPICM
Sbjct: 61  PKDYEAIIGIETHVQLSTLTKAFCGCPYSYGSPPNSSICPICM 103