BLASTX nr result

ID: Coptis23_contig00026742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026742
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332190.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_003617633.1| hypothetical protein MTR_5g093740 [Medicago ...    81   8e-14
ref|XP_003594344.1| hypothetical protein MTR_2g027540 [Medicago ...    81   8e-14
emb|CAN72284.1| hypothetical protein VITISV_013530 [Vitis vinifera]    81   1e-13
emb|CBI39840.3| unnamed protein product [Vitis vinifera]               80   1e-13

>ref|XP_002332190.1| predicted protein [Populus trichocarpa] gi|222875297|gb|EEF12428.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/61 (70%), Positives = 49/61 (80%)
 Frame = +1

Query: 58  VEEPKEKAVWIKHYCSYHKILLVGEGDFSFSACLARAFGSASNMVATSLDSKSFLKENYS 237
           VEE KEK  WI HY S+ KILLVGEGDFSF+ACL +AFGSA++MVATSLDSK  L   YS
Sbjct: 132 VEEEKEK--WITHYSSHQKILLVGEGDFSFAACLGKAFGSAASMVATSLDSKECLVATYS 189

Query: 238 K 240
           +
Sbjct: 190 R 190


>ref|XP_003617633.1| hypothetical protein MTR_5g093740 [Medicago truncatula]
           gi|355518968|gb|AET00592.1| hypothetical protein
           MTR_5g093740 [Medicago truncatula]
          Length = 525

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/59 (71%), Positives = 46/59 (77%)
 Frame = +1

Query: 64  EPKEKAVWIKHYCSYHKILLVGEGDFSFSACLARAFGSASNMVATSLDSKSFLKENYSK 240
           + K K  WIKHY S  KILLVGEGDFSF+  LARAF SASNMVATSLDSK  L+ NYS+
Sbjct: 247 DSKMKERWIKHYNSCQKILLVGEGDFSFALSLARAFRSASNMVATSLDSKESLRMNYSR 305



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/52 (71%), Positives = 42/52 (80%)
 Frame = +1

Query: 85  WIKHYCSYHKILLVGEGDFSFSACLARAFGSASNMVATSLDSKSFLKENYSK 240
           WIKHY ++HKILLVGEGDFSF+  LA AFGSASN+VATS DSK  L   YS+
Sbjct: 5   WIKHYSNHHKILLVGEGDFSFALSLANAFGSASNIVATSRDSKGSLIMKYSR 56


>ref|XP_003594344.1| hypothetical protein MTR_2g027540 [Medicago truncatula]
           gi|124360901|gb|ABN08873.1| nucleic acid binding ,
           related [Medicago truncatula]
           gi|355483392|gb|AES64595.1| hypothetical protein
           MTR_2g027540 [Medicago truncatula]
           gi|388520621|gb|AFK48372.1| unknown [Medicago
           truncatula]
          Length = 249

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
 Frame = +1

Query: 61  EEPKEK-AVWIKHYCSYHKILLVGEGDFSFSACLARAFGSASNMVATSLDSKSFLKENYS 237
           EEP    A W KHY S HKIL VGEGDFSFS CLARAFGSA N++ATSLDS+  +++ YS
Sbjct: 33  EEPSSNTAKWKKHYSSKHKILFVGEGDFSFSLCLARAFGSAHNLIATSLDSQEKIEKKYS 92


>emb|CAN72284.1| hypothetical protein VITISV_013530 [Vitis vinifera]
          Length = 1000

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/74 (58%), Positives = 49/74 (66%)
 Frame = +1

Query: 13  SAGLKWADIVQKTFVVEEPKEKAVWIKHYCSYHKILLVGEGDFSFSACLARAFGSASNMV 192
           + G  W D       +EE K +  WIKHY S +KILLVGEGDFSFSA LA AF SA+N+ 
Sbjct: 341 AVGKNWWDCSSCEEDLEEGKLRVRWIKHYSSEYKILLVGEGDFSFSASLAVAFASATNIT 400

Query: 193 ATSLDSKSFLKENY 234
           ATSLDS  FL  NY
Sbjct: 401 ATSLDSIEFLSTNY 414


>emb|CBI39840.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/72 (59%), Positives = 48/72 (66%)
 Frame = +1

Query: 19  GLKWADIVQKTFVVEEPKEKAVWIKHYCSYHKILLVGEGDFSFSACLARAFGSASNMVAT 198
           G  W D       +EE K +  WIKHY S +KILLVGEGDFSFSA LA AF SA+N+ AT
Sbjct: 74  GKNWWDCSSCEEDLEEGKLRVRWIKHYSSEYKILLVGEGDFSFSASLAVAFASATNITAT 133

Query: 199 SLDSKSFLKENY 234
           SLDS  FL  NY
Sbjct: 134 SLDSIEFLSTNY 145


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