BLASTX nr result

ID: Coptis23_contig00026735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026735
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334072.1| cc-nbs-lrr resistance protein [Populus trich...    60   1e-07
ref|XP_002302991.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002334072.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222839772|gb|EEE78095.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1005

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 41/108 (37%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
 Frame = -1

Query: 338  CL*ILELVPCPKL-KLPSVPSSIKQLTMGRCDDPTFNLVEKLPKLFFPSYYGICEVETLP 162
            CL  L++  CPKL +LP +PS +K LT+  C       V     + +    G  E+  LP
Sbjct: 815  CLDELQIRKCPKLVELPIIPS-VKHLTIEDCTVTLLRSVVNFTSITYLRIEGFDELAVLP 873

Query: 161  QAPLQNRTCLQSLVISNCVKLRRLSTVLENLTKVIRSRAIDNCGGLDS 18
               LQN TCLQ L I+    LR LS  L NL+  ++   I NC  L+S
Sbjct: 874  DGLLQNHTCLQKLSITKMRSLRSLSNQLNNLSS-LKHLVIMNCDKLES 920


>ref|XP_002302991.1| predicted protein [Populus trichocarpa] gi|222844717|gb|EEE82264.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/96 (39%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
 Frame = -1

Query: 338 CL*ILELVPCPKL-KLPSVPSSIKQLTMGRCDDPTFNLVEKLPKLFFPSYYGICEVETLP 162
           CL  L++  CPKL +LP +PS +K LT+G C       V     +      G  E+  LP
Sbjct: 202 CLHELQIGKCPKLVELPIIPS-VKDLTIGDCSVTLLRSVVNFSSMTSLQIEGFDELTVLP 260

Query: 161 QAPLQNRTCLQSLVISNCVKLRRLSTVLENLTKVIR 54
              LQN TCLQSL       LR LS  L NL+ + R
Sbjct: 261 DGLLQNHTCLQSLTFQGMGSLRSLSNQLNNLSSLKR 296


>ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|222834470|gb|EEE72947.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
 Frame = -1

Query: 338 CL*ILELVPCPKL-KLPSVPSSIKQLTMGRCDDPTFNLVEKLPKLFFPSYYGICEVETLP 162
           CL  L++  CPKL +LP +PS +K LT+  C       V     +      G  E+  LP
Sbjct: 227 CLDELQIRKCPKLVELPIIPS-VKYLTIEDCAVTLLRSVVNFTSITSLRIEGFDELAVLP 285

Query: 161 QAPLQNRTCLQSLVISNCVKLRRLSTVLENLTKVIRSRAIDNCGGLDSL 15
              LQN TCLQSL   +   LR LS  L NL+  ++S     C  L+SL
Sbjct: 286 DGLLQNHTCLQSLTFGSMGSLRSLSNQLNNLSS-LKSLGFLFCDKLESL 333


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