BLASTX nr result

ID: Coptis23_contig00026724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026724
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275655.1| PREDICTED: uncharacterized protein LOC100258...   206   3e-51
ref|XP_002301506.1| multidrug resistance protein ABC transporter...   192   4e-47
ref|XP_002515299.1| conserved hypothetical protein [Ricinus comm...   191   1e-46
ref|XP_002320979.1| predicted protein [Populus trichocarpa] gi|2...   186   3e-45
ref|XP_003591419.1| Multidrug resistance protein ABC transporter...   183   3e-44

>ref|XP_002275655.1| PREDICTED: uncharacterized protein LOC100258949 [Vitis vinifera]
          Length = 196

 Score =  206 bits (524), Expect = 3e-51
 Identities = 111/196 (56%), Positives = 143/196 (72%), Gaps = 5/196 (2%)
 Frame = -3

Query: 582 MGNYISQEKFDMSGKVVLSNGTVHEFDHPLTVAELMLEHPQEVVVEFRSPVA--GNKLTP 409
           MGNY+S      +GK+VLS+G+VHEF  P+TVAELMLEHPQ+VVVE  S     G + +P
Sbjct: 1   MGNYVSFRSCSAAGKIVLSDGSVHEFIKPVTVAELMLEHPQQVVVELNSGKGSGGKRPSP 60

Query: 408 LPADKKLDMKKVYLMIPMKIGRAGTLPVNEARRILQDANNVLRSRALLASTRILPLFFQG 229
           LPAD KL+M KVYLM+PMK GRA TL   EARR+L  A++VL+S++ L+S+R+LP F + 
Sbjct: 61  LPADMKLEMGKVYLMLPMKRGRAVTLSSEEARRVLLRASSVLQSQSFLSSSRLLPFFAKI 120

Query: 228 CKTGIGVESNVVLHRKDG--VLENMDKTNRQEL-LPETFDERTEFLSRQFSAKGWKPSLD 58
           C  G G     VL+RK+   V+E+ ++  + E  LPE  + R E+LSRQFS KGWKPSLD
Sbjct: 121 CPAGTGDGPGYVLNRKEKSLVMESPEERCKPEFDLPEALEGRPEYLSRQFSGKGWKPSLD 180

Query: 57  TIKEKKIEQKVSHWLF 10
           TI+EKKIE+KV HWLF
Sbjct: 181 TIEEKKIEKKVPHWLF 196


>ref|XP_002301506.1| multidrug resistance protein ABC transporter family protein
           [Populus trichocarpa] gi|222843232|gb|EEE80779.1|
           multidrug resistance protein ABC transporter family
           protein [Populus trichocarpa]
          Length = 197

 Score =  192 bits (488), Expect = 4e-47
 Identities = 106/197 (53%), Positives = 133/197 (67%), Gaps = 6/197 (3%)
 Frame = -3

Query: 582 MGNYI----SQEKFDMSGKVVLSNGTVHEFDHPLTVAELMLEHPQEVVVEFRSPVAGNKL 415
           MGNYI    S      +G+V+L +G V EFD PLT AELMLE+PQ+VVVEF S     + 
Sbjct: 1   MGNYITFPNSSNSAAGTGRVILWDGKVFEFDTPLTAAELMLEYPQQVVVEFHSDFTEKRP 60

Query: 414 TPLPADKKLDMKKVYLMIPMKIGRAGTLPVNEARRILQDANNVLRSRALLASTRILPLFF 235
            PLPADK+LD+KKVYLM+P+K G+  +L   EARR+L  AN+VLRSR+LL+S+R  PLF 
Sbjct: 61  APLPADKRLDLKKVYLMLPIKRGKPASLSSGEARRVLLSANSVLRSRSLLSSSRFFPLFA 120

Query: 234 QGCKTGIGVESNVVLHRKD-GVLENMDKTNRQELLPETFDERTEFLSRQFSAKG-WKPSL 61
           + C +G G E   V+ +K+  V E     N    L E  + R E+LSRQ S KG WKPSL
Sbjct: 121 RICPSGTGEEQIFVMQKKECHVEEKPAMENYDSELTEISESRPEYLSRQLSGKGTWKPSL 180

Query: 60  DTIKEKKIEQKVSHWLF 10
           DTIKEKK+E+K  HWLF
Sbjct: 181 DTIKEKKVEKKTPHWLF 197


>ref|XP_002515299.1| conserved hypothetical protein [Ricinus communis]
           gi|223545779|gb|EEF47283.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score =  191 bits (485), Expect = 1e-46
 Identities = 101/188 (53%), Positives = 133/188 (70%), Gaps = 3/188 (1%)
 Frame = -3

Query: 582 MGNYISQEKFDMSGKVVLSNGTVHEFDHPLTVAELMLEHPQEVVVEFRSPVAGNKLTPLP 403
           MGNYI+    + +GKV+L +GTVH FD  LTVAELMLE+PQ+VVVEF+  ++  +  PLP
Sbjct: 1   MGNYITSRSSNATGKVILPDGTVHAFDKSLTVAELMLEYPQQVVVEFQQNLSEKRPAPLP 60

Query: 402 ADKKLDMKKVYLMIPMKIGRAGTLPVNEARRILQDANNVLRSRALLASTRILPLFFQGCK 223
           ADKKL+ KKVYL++PMK G+   L   EAR++L  AN+VLRSR+LL+S+R LPLF + C 
Sbjct: 61  ADKKLEAKKVYLILPMKRGKILPLSSEEARQVLSGANSVLRSRSLLSSSRFLPLFARICP 120

Query: 222 TGIGVESNVVLHRKDGVLEN---MDKTNRQELLPETFDERTEFLSRQFSAKGWKPSLDTI 52
            G+      VL  KDG +E    +++    E+L E  + R  +LSRQ S KGWKPSLDTI
Sbjct: 121 AGVEGGHKFVL-EKDGCIEKKRMLEERYDSEVLAEILENRPNYLSRQLSGKGWKPSLDTI 179

Query: 51  KEKKIEQK 28
           KEKK+E+K
Sbjct: 180 KEKKVEKK 187


>ref|XP_002320979.1| predicted protein [Populus trichocarpa] gi|222861752|gb|EEE99294.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  186 bits (472), Expect = 3e-45
 Identities = 102/195 (52%), Positives = 135/195 (69%), Gaps = 4/195 (2%)
 Frame = -3

Query: 582 MGNYISQEKFDMS-GKVVLSNGTVHEFDHPLTVAELMLEHPQEVVVEFRSPVAGNKLTPL 406
           MGN I+      S G+V+LS+G V EFD PLTVAELMLE+PQ+VVVEF S +   +  PL
Sbjct: 1   MGNCITYHNSSNSAGRVILSDGRVCEFDKPLTVAELMLEYPQQVVVEFHSYLTEKRPPPL 60

Query: 405 PADKKLDMKKVYLMIPMKIGRAGTLPVNEARRILQDANNVLRSRALLASTRILPLFFQGC 226
           PADKKL+M K+YLM+PMK G+  +L   EARR+L  AN+VLRSR+ L+S+R LPLF   C
Sbjct: 61  PADKKLEM-KLYLMLPMKPGKPASLSSEEARRVLLSANSVLRSRSSLSSSRFLPLFAMMC 119

Query: 225 KTGIGVESNVVLHRKDGVLENMDKTNRQ--ELLPETFDERTEFLSRQFSAKG-WKPSLDT 55
             G+G E  +V+ +K+  +E     +++    L E F+ R E+LSRQ S KG WKPSL T
Sbjct: 120 PAGVGEEQKLVMRKKECYVEEKPAADQKYDSELTEIFESRPEYLSRQLSGKGTWKPSLGT 179

Query: 54  IKEKKIEQKVSHWLF 10
           I EK++E+K+  WLF
Sbjct: 180 INEKRVEKKIPRWLF 194


>ref|XP_003591419.1| Multidrug resistance protein ABC transporter family protein
           [Medicago truncatula] gi|355480467|gb|AES61670.1|
           Multidrug resistance protein ABC transporter family
           protein [Medicago truncatula]
          Length = 192

 Score =  183 bits (464), Expect = 3e-44
 Identities = 98/192 (51%), Positives = 128/192 (66%), Gaps = 1/192 (0%)
 Frame = -3

Query: 582 MGNYISQEKFDMSGKVVLSNGTVHEFDHPLTVAELMLEHPQEVVVEFRSPVAGNKLTPLP 403
           MGN +S    D +GKVV  +G+VHEFD  +TVAELM++HPQ+VVVEF S V   + TPLP
Sbjct: 1   MGNQVSFRPSDPTGKVVFLDGSVHEFDEAITVAELMMDHPQKVVVEFHSAVNQKRPTPLP 60

Query: 402 ADKKLDMKKVYLMIPMKIGRAGTLPVNEARRILQDANNVLRSRALLASTRILPLFFQGCK 223
           ADKKLDM K+YLM+P+K G+   L   E RR+L   N++L S  +L S++ LP F   C 
Sbjct: 61  ADKKLDMNKIYLMLPVKQGKPIGLSGEETRRVLLMVNSILNSNYVLCSSKFLPWFSSLCH 120

Query: 222 TGIGVESNVVLHRKDGVLENM-DKTNRQELLPETFDERTEFLSRQFSAKGWKPSLDTIKE 46
               VE      RK+ V+E   ++ +  E LPE  + R ++L+RQ S KGWKPSLDTIKE
Sbjct: 121 NSEIVEP----QRKEEVMEEKGERHDFSENLPEIMEGRPDYLNRQISGKGWKPSLDTIKE 176

Query: 45  KKIEQKVSHWLF 10
           K IE+K +HWLF
Sbjct: 177 KNIEKKHTHWLF 188


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