BLASTX nr result

ID: Coptis23_contig00026721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026721
         (1125 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22633.3| unnamed protein product [Vitis vinifera]              478   e-133
ref|XP_002274252.2| PREDICTED: coiled-coil domain-containing pro...   476   e-132
ref|XP_002513641.1| conserved hypothetical protein [Ricinus comm...   451   e-124
ref|XP_003619414.1| Defensin/CCP-like protein [Medicago truncatu...   438   e-120
ref|NP_001154775.1| DNA primase [Arabidopsis thaliana] gi|332008...   438   e-120

>emb|CBI22633.3| unnamed protein product [Vitis vinifera]
          Length = 606

 Score =  478 bits (1231), Expect = e-133
 Identities = 231/366 (63%), Positives = 289/366 (78%), Gaps = 2/366 (0%)
 Frame = -2

Query: 1124 VDVLLSVIFYALLDKYSIHGEEDWVVELDSSTEEKFSRHLIIRVPKSAFKDNSHAGAFVA 945
            VD+L+SV+  ALL+KYSI   E W+VELDSST EKFSRHLIIR+PK AFKDNSHAG FVA
Sbjct: 207  VDLLISVVSEALLEKYSIQVNEKWIVELDSSTGEKFSRHLIIRIPKIAFKDNSHAGVFVA 266

Query: 944  EVCSRICSGRDRDHKLQKLFVSKDLSSHEPLHHLFVDTAVYSRNRCFRLALSSKAGKKSI 765
            E+CS+I S  + D   +KLF+SK  +S E    LFVDTAVYSRNRCFRLALSSKAGK S+
Sbjct: 267  EICSQISSAGEGDGNFKKLFISKGSTSAEFPCQLFVDTAVYSRNRCFRLALSSKAGKNSV 326

Query: 764  LLPTSRFKCKNLCEQDMFMDSLICKMDGDCQKLLICKMDVDCMKTLCFDSEDKCDYEKLS 585
            LLPT RFKCK++CE++MFM SLIC +D DC+K L+CKMD++C+KTL FD E+  +  K S
Sbjct: 327  LLPTGRFKCKDMCEEEMFMASLICNIDVDCEKFLVCKMDLNCVKTLHFDMEENHNCRKHS 386

Query: 584  TAP-SLALHACTTDFPTTYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGLIVY 408
            ++P   AL ACT++   T F+G SPFPALD+FVESIASIGNVSG+IRSWYWFSEY L+VY
Sbjct: 387  SSPQDFALSACTSNVSGTCFMGNSPFPALDIFVESIASIGNVSGKIRSWYWFSEYRLMVY 446

Query: 407  NMLRNRYCERIGRQHKSNHVMYVVDFKRTVYYQKCYDPDCKGYRSPFHPIPDDVIPDTST 228
            +M RNRYCERIGRQHKSNHV+YVVD +R ++YQKC+DPDC+GYRSP  PIP DVIP+T+ 
Sbjct: 447  SMSRNRYCERIGRQHKSNHVIYVVDLRRAIFYQKCHDPDCRGYRSPSRPIPMDVIPNTAV 506

Query: 227  CFNSTQSDDH-RVGNNDLDHQLGQNEVDHIPCDSDQKITDSCKKDGWWLEAVKIADEFES 51
              +S Q++ H    +N L + L +N+ + +   +D+ ITDSCKKD WWLEA++ AD  ES
Sbjct: 507  LMDSVQTEHHVESTSNHLGYSLVENDQECVSLYNDKSITDSCKKDAWWLEAIRFADNVES 566

Query: 50   RRKMQN 33
             + M++
Sbjct: 567  VQHMRD 572


>ref|XP_002274252.2| PREDICTED: coiled-coil domain-containing protein 111 homolog [Vitis
            vinifera]
          Length = 632

 Score =  476 bits (1226), Expect = e-132
 Identities = 231/366 (63%), Positives = 288/366 (78%), Gaps = 2/366 (0%)
 Frame = -2

Query: 1124 VDVLLSVIFYALLDKYSIHGEEDWVVELDSSTEEKFSRHLIIRVPKSAFKDNSHAGAFVA 945
            VD+L+SV+  ALL+KYSI   E W+VELDSST EKFSRHLIIR+PK AFKDNSHAG FVA
Sbjct: 233  VDLLISVVSEALLEKYSIQVNEKWIVELDSSTGEKFSRHLIIRIPKIAFKDNSHAGVFVA 292

Query: 944  EVCSRICSGRDRDHKLQKLFVSKDLSSHEPLHHLFVDTAVYSRNRCFRLALSSKAGKKSI 765
            E+CS+I S  + D   +KLF+SK  +S E    LFVDTAVYSRNRCFRLALSSKAGK S+
Sbjct: 293  EICSQISSAGEGDGNFKKLFISKGSTSAEFPCQLFVDTAVYSRNRCFRLALSSKAGKNSV 352

Query: 764  LLPTSRFKCKNLCEQDMFMDSLICKMDGDCQKLLICKMDVDCMKTLCFDSEDKCDYEKLS 585
            LLPT RFKCK++CE++MFM SLIC +D DC+K L+CKMD++C+KTL FD E   +  K S
Sbjct: 353  LLPTGRFKCKDMCEEEMFMASLICNIDVDCEKFLVCKMDLNCVKTLHFDMEVNHNCRKHS 412

Query: 584  TAP-SLALHACTTDFPTTYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGLIVY 408
            ++P   AL ACT++   T F+G SPFPALD+FVESIASIGNVSG+IRSWYWFSEY L+VY
Sbjct: 413  SSPQDFALSACTSNVSGTCFMGNSPFPALDIFVESIASIGNVSGKIRSWYWFSEYRLMVY 472

Query: 407  NMLRNRYCERIGRQHKSNHVMYVVDFKRTVYYQKCYDPDCKGYRSPFHPIPDDVIPDTST 228
            +M RNRYCERIGRQHKSNHV+YVVD +R ++YQKC+DPDC+GYRSP  PIP DVIP+T+ 
Sbjct: 473  SMSRNRYCERIGRQHKSNHVIYVVDLRRAIFYQKCHDPDCRGYRSPSRPIPMDVIPNTAV 532

Query: 227  CFNSTQSDDH-RVGNNDLDHQLGQNEVDHIPCDSDQKITDSCKKDGWWLEAVKIADEFES 51
              +S Q++ H    +N L + L +N+ + +   +D+ ITDSCKKD WWLEA++ AD  ES
Sbjct: 533  LMDSVQTEHHVESTSNHLGYSLVENDQECVSLYNDKSITDSCKKDAWWLEAIRFADNVES 592

Query: 50   RRKMQN 33
             + M++
Sbjct: 593  VQHMRD 598


>ref|XP_002513641.1| conserved hypothetical protein [Ricinus communis]
            gi|223547549|gb|EEF49044.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 601

 Score =  451 bits (1159), Expect = e-124
 Identities = 223/363 (61%), Positives = 276/363 (76%), Gaps = 2/363 (0%)
 Frame = -2

Query: 1124 VDVLLSVIFYALLDKYSIHGEEDWVVELDSSTEEKFSRHLIIRVPKSAFKDNSHAGAFVA 945
            VD+L+S+I  ALL+KYSI G  +W+VELDSST EKFSRHLI+R+PK+AFKDNSHAGAFV+
Sbjct: 214  VDLLISLILEALLEKYSIEGNCEWIVELDSSTAEKFSRHLILRIPKTAFKDNSHAGAFVS 273

Query: 944  EVCSRICSGRDRDHKLQKLFVSKDLSSHEPLHHLFVDTAVYSRNRCFRLALSSKAGKKSI 765
            E+CSRI S R++D + +KLFV K  SS E     F+DTAVYSRNR FRLALSSKAGK S+
Sbjct: 274  EICSRILSSREKDGRYKKLFVRKG-SSSESASQPFIDTAVYSRNRVFRLALSSKAGKNSV 332

Query: 764  LLPTSRFKCKNLCEQDMFMDSLICKMDGDCQKLLICKMDVDCMKTLCFDSEDKCDYEK-L 588
            LLPT RFKCK++CE+DMFM SLIC MD DC+KLL+CKMD+DC+KTL FD+E      +  
Sbjct: 333  LLPTGRFKCKDMCEEDMFMASLICNMDADCEKLLVCKMDLDCVKTLHFDTEANYYSRRCF 392

Query: 587  STAPSLALHACTTDFPTTYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGLIVY 408
            +T  + A   CTT        GKSPFP+LD FVESIA++G++SG+IRSWYWFSEY L+VY
Sbjct: 393  TTQENDASMTCTT--------GKSPFPSLDKFVESIATVGSLSGKIRSWYWFSEYELMVY 444

Query: 407  NMLRNRYCERIGRQHKSNHVMYVVDFKRTVYYQKCYDPDCKGYRSPFHPIPDDVIPDTST 228
            +M RNRYCERIGRQHKSNHV+YVVD +R VYYQKC+DPDC+GYRSP  P+P  +IPD S 
Sbjct: 445  SMSRNRYCERIGRQHKSNHVIYVVDLRRAVYYQKCHDPDCQGYRSPLRPVPLYLIPDPSF 504

Query: 227  CFNSTQSDDH-RVGNNDLDHQLGQNEVDHIPCDSDQKITDSCKKDGWWLEAVKIADEFES 51
             + S Q  +H  + N  LD+Q   N  + I   S++   DS  KD WWLEA K+AD+ E+
Sbjct: 505  SYASAQVANHIGLANGTLDYQSANNNHEGIMLFSEEYDIDSSSKDSWWLEAAKVADDIEN 564

Query: 50   RRK 42
             +K
Sbjct: 565  MKK 567


>ref|XP_003619414.1| Defensin/CCP-like protein [Medicago truncatula]
            gi|355494429|gb|AES75632.1| Defensin/CCP-like protein
            [Medicago truncatula]
          Length = 687

 Score =  438 bits (1127), Expect = e-120
 Identities = 207/361 (57%), Positives = 270/361 (74%), Gaps = 1/361 (0%)
 Frame = -2

Query: 1124 VDVLLSVIFYALLDKYSIHGEEDWVVELDSSTEEKFSRHLIIRVPKSAFKDNSHAGAFVA 945
            VD+L+SV+  AL +KY IHG+ DW+VELDSSTE+KFSRHLIIR+PK+AFKDNSHAGAFV+
Sbjct: 236  VDLLISVVLEALHEKYEIHGDHDWIVELDSSTEDKFSRHLIIRIPKAAFKDNSHAGAFVS 295

Query: 944  EVCSRICSGRDRDHKLQKLFVSKDLSSHEPLHHLFVDTAVYSRNRCFRLALSSKAGKKSI 765
            E+CSRI + R +D   +KLF++KD S++E    LFVDTAVY+RNRCFRL LSSKAGK SI
Sbjct: 296  EICSRILNARGKDKSYEKLFIAKDSSTNESASQLFVDTAVYTRNRCFRLHLSSKAGKSSI 355

Query: 764  LLPTSRFKCKNLCEQDMFMDSLICKMDGDCQKLLICKMDVDCMKTLCFDSEDKCDY-EKL 588
            LLPT RFKCKNL E+DMFM SLIC MD DC KLL+CK D+DC+KTL FD+E   +    +
Sbjct: 356  LLPTERFKCKNLSEEDMFMASLICNMDADCGKLLVCKPDLDCVKTLHFDTELNGNVGHSV 415

Query: 587  STAPSLALHACTTDFPTTYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGLIVY 408
             +    AL+ CT+D  TTYF+GKSPFP L+ F+ S+AS+GN+ G+I SWY FSE+GL+VY
Sbjct: 416  QSHTEFALNTCTSDVSTTYFMGKSPFPRLEEFILSVASVGNIPGKIHSWYLFSEFGLMVY 475

Query: 407  NMLRNRYCERIGRQHKSNHVMYVVDFKRTVYYQKCYDPDCKGYRSPFHPIPDDVIPDTST 228
            +M++NRYCERIGR HKSN+V+YVVD +  VYYQKC+DPDC+GYRS   PIP  V+ + S 
Sbjct: 476  SMIKNRYCERIGRPHKSNNVIYVVDLRMAVYYQKCHDPDCRGYRSSSRPIPVHVLANPSV 535

Query: 227  CFNSTQSDDHRVGNNDLDHQLGQNEVDHIPCDSDQKITDSCKKDGWWLEAVKIADEFESR 48
               S+   D +   ++  HQ   N+ + +  +      +    D WWLEA+K+ +E E++
Sbjct: 536  VIGSSGMLDDKHSEDEQGHQPNDNKPNFLQYED---TVEDNYSDSWWLEAIKVVEEVENK 592

Query: 47   R 45
            +
Sbjct: 593  K 593


>ref|NP_001154775.1| DNA primase [Arabidopsis thaliana] gi|332008880|gb|AED96263.1| DNA
            primase [Arabidopsis thaliana]
          Length = 614

 Score =  438 bits (1126), Expect = e-120
 Identities = 213/366 (58%), Positives = 269/366 (73%), Gaps = 1/366 (0%)
 Frame = -2

Query: 1124 VDVLLSVIFYALLDKYSIHGEEDWVVELDSSTEEKFSRHLIIRVPKSAFKDNSHAGAFVA 945
            VD+L+SVI  AL +KY+I G+EDW+VELDSST++KFSRH+I+ +PK AFKDNSH GAFV 
Sbjct: 227  VDILISVILEALREKYAIEGQEDWIVELDSSTKDKFSRHVIVIIPKVAFKDNSHVGAFVG 286

Query: 944  EVCSRICSGRDRDHKLQKLFVSKDLSSHEPLHHLFVDTAVYSRNRCFRLALSSKAGKKSI 765
            E+CSRI + ++ D +L+KLFV K+ +    L  LFVDTAVYSRNRCFRLALSSKAGK S+
Sbjct: 287  ELCSRIVNAKETDERLRKLFVHKEANDSASL--LFVDTAVYSRNRCFRLALSSKAGKTSV 344

Query: 764  LLPTSRFKCKNLCEQDMFMDSLICKMDGDCQKLLICKMDVDCMKTLCFDSE-DKCDYEKL 588
            LLPT RFKCK++ E+D+FM SLIC ++ DC+KLL+CKM+ DCMKTLCFD+E +  +  + 
Sbjct: 345  LLPTGRFKCKDMGERDVFMTSLICNVESDCEKLLVCKMESDCMKTLCFDTEVNSNNLVRD 404

Query: 587  STAPSLALHACTTDFPTTYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGLIVY 408
              A    L+A T+D  T+YF GKSPFP LD F+ES AS GNV G+IR WYWFSE GLIVY
Sbjct: 405  QNAQKFQLNASTSDMSTSYFGGKSPFPQLDQFIESTASTGNVPGKIRCWYWFSEDGLIVY 464

Query: 407  NMLRNRYCERIGRQHKSNHVMYVVDFKRTVYYQKCYDPDCKGYRSPFHPIPDDVIPDTST 228
            +MLRNRYCERIGR+HKSNHVMY+VD +R +YYQKCYDPDC+ YRSP  P+PD  +P+   
Sbjct: 465  SMLRNRYCERIGREHKSNHVMYIVDLRRGIYYQKCYDPDCRDYRSPIRPVPDSYLPEDMV 524

Query: 227  CFNSTQSDDHRVGNNDLDHQLGQNEVDHIPCDSDQKITDSCKKDGWWLEAVKIADEFESR 48
             +     +       D  +  G+  VD   CD D     +  +  WWLEAVK+AD+ ES+
Sbjct: 525  YYQGATQN-----LCDNLYSEGECHVDK-ECDPD----SAASRGSWWLEAVKVADDLESK 574

Query: 47   RKMQNP 30
             K   P
Sbjct: 575  PKTLEP 580


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