BLASTX nr result

ID: Coptis23_contig00026720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026720
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533077.1| PREDICTED: putative UPF0481 protein At3g0264...    61   1e-07
ref|XP_004152335.1| PREDICTED: putative UPF0481 protein At3g0264...    59   3e-07
ref|XP_003529793.1| PREDICTED: putative UPF0481 protein At3g0264...    58   7e-07
ref|XP_003621603.1| hypothetical protein MTR_7g017620 [Medicago ...    57   2e-06
ref|XP_002313925.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_003533077.1| PREDICTED: putative UPF0481 protein At3g02645-like [Glycine max]
          Length = 543

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/57 (54%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
 Frame = -3

Query: 210 LEYENSSLEVGDEVLSLMLAGLCRELSPFNIADLH-GVQVSDIVHLLDFLFQVIVPK 43
           L+ + SSLE  D++LSLM  GL +E+SPF + + +  +QVS+ VHLLDFL+ VIVPK
Sbjct: 177 LDLKFSSLEAADDMLSLMFIGLFKEISPFKMMEEYPNIQVSENVHLLDFLYNVIVPK 233


>ref|XP_004152335.1| PREDICTED: putative UPF0481 protein At3g02645-like [Cucumis
           sativus] gi|449516085|ref|XP_004165078.1| PREDICTED:
           putative UPF0481 protein At3g02645-like [Cucumis
           sativus]
          Length = 536

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = -3

Query: 210 LEYENSSLEVGDEVLSLMLAGLCRELSPFNIAD-LHGVQVSDIVHLLDFLFQVIVPK 43
           +E+++ S +  DE+L  M+ GL  ELSPFN  D +  +Q+SD  HLLDFL+Q+I PK
Sbjct: 192 MEFQSESSQQSDEILLSMMIGLFTELSPFNTTDGIPEIQISDCAHLLDFLYQMIAPK 248


>ref|XP_003529793.1| PREDICTED: putative UPF0481 protein At3g02645-like [Glycine max]
          Length = 542

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
 Frame = -3

Query: 210 LEYENSSLEVGDEVLSLMLAGLCRELSPFNIADLH-GVQVSDIVHLLDFLFQVIVPK 43
           L+ + SSLE  D++LSLM  GL +E+SPF + + +  + VS+ VHLLDFL+ +IVPK
Sbjct: 176 LDLKFSSLEAADDMLSLMFIGLFKEISPFKMMEEYPNIDVSESVHLLDFLYDLIVPK 232


>ref|XP_003621603.1| hypothetical protein MTR_7g017620 [Medicago truncatula]
           gi|355496618|gb|AES77821.1| hypothetical protein
           MTR_7g017620 [Medicago truncatula]
          Length = 553

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
 Frame = -3

Query: 210 LEYENSSLEVGDEVLSLMLAGLCRELSPFNIA--DLHGVQVSDIVHLLDFLFQVIVPK 43
           LE++ +SLE+ D++L LM  GL +E+SPF +   D   + VS+  HLLDFL+ +IVPK
Sbjct: 196 LEFKFTSLELADDMLILMFIGLYKEISPFKVMEHDYSDIVVSECAHLLDFLYNMIVPK 253


>ref|XP_002313925.1| predicted protein [Populus trichocarpa] gi|222850333|gb|EEE87880.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
 Frame = -3

Query: 210 LEYENSSLEVGDEVLSLMLAGLCRELSPFNI-ADLHGVQVSDIVHLLDFLFQVIVPK 43
           LE + SSLE+ D++L  ML G C+ELSPF +  D+  + +    HLLD+L+ +IVPK
Sbjct: 197 LEVQLSSLELADDMLCSMLLGFCKELSPFKLMQDIPKIHIPQCAHLLDYLYDMIVPK 253


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