BLASTX nr result

ID: Coptis23_contig00026700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026700
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510238.1| conserved hypothetical protein [Ricinus comm...    87   3e-15
ref|XP_002301191.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002510237.1| conserved hypothetical protein [Ricinus comm...    79   5e-13
ref|XP_002327134.1| predicted protein [Populus trichocarpa] gi|2...    79   8e-13
dbj|BAJ96955.1| predicted protein [Hordeum vulgare subsp. vulgare]     74   2e-11

>ref|XP_002510238.1| conserved hypothetical protein [Ricinus communis]
           gi|223550939|gb|EEF52425.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 95

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 36/78 (46%), Positives = 54/78 (69%)
 Frame = -3

Query: 515 QLSLEQFQQWIQGLDTDRDGRISKQELVEGLRGQGLWFKHWRAQRALSHVDKNSNGLVDG 336
           ++++E+ ++W++  DTDRDGRISK+EL E +R  G WF  W+ +R +   D N NG VD 
Sbjct: 16  EMTVEELKRWLRSFDTDRDGRISKEELAEAIRENGGWFARWKGKRGVKSADSNGNGFVDA 75

Query: 335 DIEFCELLEYAKKHWGIK 282
           + E   L+E+AKKH G+K
Sbjct: 76  N-EISNLVEFAKKHLGVK 92


>ref|XP_002301191.1| predicted protein [Populus trichocarpa] gi|222842917|gb|EEE80464.1|
           predicted protein [Populus trichocarpa]
          Length = 93

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 36/80 (45%), Positives = 54/80 (67%)
 Frame = -3

Query: 524 GHRQLSLEQFQQWIQGLDTDRDGRISKQELVEGLRGQGLWFKHWRAQRALSHVDKNSNGL 345
           G R++++ QF+ W++ LD D+DG+ISK EL + +RG G WF  W+A+R +   D N NG+
Sbjct: 12  GKREMTMAQFRIWVKTLDADKDGKISKDELSDAVRGNGGWFAGWKAKRGVKAADANGNGV 71

Query: 344 VDGDIEFCELLEYAKKHWGI 285
           +D D E   L  +A+KH GI
Sbjct: 72  ID-DSEIDILAAFAQKHLGI 90


>ref|XP_002510237.1| conserved hypothetical protein [Ricinus communis]
           gi|223550938|gb|EEF52424.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 95

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 32/81 (39%), Positives = 51/81 (62%)
 Frame = -3

Query: 524 GHRQLSLEQFQQWIQGLDTDRDGRISKQELVEGLRGQGLWFKHWRAQRALSHVDKNSNGL 345
           G  ++++E+ ++W+   DTD+DGRISK+EL + +R  G WF  W+ +R +   D N NG 
Sbjct: 13  GQNEMTIEELKRWLISFDTDKDGRISKEELADAIRENGGWFARWKGRRGIKSADSNGNGF 72

Query: 344 VDGDIEFCELLEYAKKHWGIK 282
           VD   E   L+ + +KH G+K
Sbjct: 73  VDAS-EIDNLMGFVQKHLGVK 92


>ref|XP_002327134.1| predicted protein [Populus trichocarpa] gi|222835449|gb|EEE73884.1|
           predicted protein [Populus trichocarpa]
          Length = 76

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 35/73 (47%), Positives = 50/73 (68%)
 Frame = -3

Query: 500 QFQQWIQGLDTDRDGRISKQELVEGLRGQGLWFKHWRAQRALSHVDKNSNGLVDGDIEFC 321
           QF+ W++ +D D+DG+ISK EL + +RG G WF  W+A+R +   D N NG VD + E  
Sbjct: 3   QFRAWMKTIDGDKDGKISKDELSDAVRGNGGWFAGWKAKRGVGSADSNGNGFVD-ETEIG 61

Query: 320 ELLEYAKKHWGIK 282
            L+E+A+KH GIK
Sbjct: 62  NLVEFAQKHLGIK 74


>dbj|BAJ96955.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 98

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 35/79 (44%), Positives = 50/79 (63%)
 Frame = -3

Query: 518 RQLSLEQFQQWIQGLDTDRDGRISKQELVEGLRGQGLWFKHWRAQRALSHVDKNSNGLVD 339
           ++ ++E+F+ W+   D D DGRIS++EL E LR   LWF  W+A+ AL   D N NGLVD
Sbjct: 13  QETTVEEFRAWLAQFDADGDGRISREELREALRSLDLWFAWWKAREALRDADANRNGLVD 72

Query: 338 GDIEFCELLEYAKKHWGIK 282
           GD E   L  +A+ +  +K
Sbjct: 73  GD-EMARLYAFARNNLHLK 90


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