BLASTX nr result

ID: Coptis23_contig00026689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026689
         (854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535743.1| PREDICTED: tubulin-specific chaperone D-like...   199   7e-49
ref|XP_002274584.2| PREDICTED: tubulin-specific chaperone D isof...   196   6e-48
ref|XP_003633922.1| PREDICTED: tubulin-specific chaperone D isof...   196   6e-48
emb|CBI38891.3| unnamed protein product [Vitis vinifera]              196   6e-48
ref|XP_003555220.1| PREDICTED: tubulin-specific chaperone D-like...   194   2e-47

>ref|XP_003535743.1| PREDICTED: tubulin-specific chaperone D-like [Glycine max]
          Length = 1266

 Score =  199 bits (506), Expect = 7e-49
 Identities = 99/150 (66%), Positives = 127/150 (84%), Gaps = 1/150 (0%)
 Frame = -1

Query: 851  AVLDTLAVELKGSKDFSKLYTGISILGYIASVLNQINSLAFSQLISFLGHRYPKIRKASA 672
            AVLD+++ E+KGSKDFSKLY GI+ILGY+A+V   IN  AFSQL++FLGHRYPKIRKASA
Sbjct: 1117 AVLDSVSFEVKGSKDFSKLYAGIAILGYVAAVQEPINMRAFSQLLNFLGHRYPKIRKASA 1176

Query: 671  DQSYLVLLQNENVISGDKIDKALEVISETCWEGDIEEAKHQRSQLYDLVGLEVGTILKTT 492
            +Q YLVLL+N N+++ DKIDKALE+ISETCW+GD++ AKHQR +LY++VGLEVG++   +
Sbjct: 1177 EQLYLVLLENGNLVAEDKIDKALEIISETCWDGDMDSAKHQRLKLYEIVGLEVGSLGNNS 1236

Query: 491  NKESIKDAIRK-ATADENASYSSLVDSSGF 405
            +  S K + +K A  DENASYSSLV+SSGF
Sbjct: 1237 DGTSRKTSSKKPANLDENASYSSLVESSGF 1266


>ref|XP_002274584.2| PREDICTED: tubulin-specific chaperone D isoform 1 [Vitis vinifera]
          Length = 1269

 Score =  196 bits (498), Expect = 6e-48
 Identities = 100/151 (66%), Positives = 123/151 (81%), Gaps = 1/151 (0%)
 Frame = -1

Query: 854  AAVLDTLAVELKGSKDFSKLYTGISILGYIASVLNQINSLAFSQLISFLGHRYPKIRKAS 675
            A VLD+LAVELK +KDFSKLY GI+ILGYIASV   +N+ AFS L++FLGHRYPKIRKAS
Sbjct: 1119 AGVLDSLAVELKATKDFSKLYAGIAILGYIASVPESVNTRAFSHLLTFLGHRYPKIRKAS 1178

Query: 674  ADQSYLVLLQNENVISGDKIDKALEVISETCWEGDIEEAKHQRSQLYDLVGLEVGTILKT 495
            A+Q YLVLLQN  +++ DK++KALE+ISETCWEGDIEEAK +R +L+D+ GLE G + K 
Sbjct: 1179 AEQVYLVLLQNGELVTEDKMEKALEIISETCWEGDIEEAKQRRLELHDMAGLETGLLPKI 1238

Query: 494  TNKESIKDAIRKATA-DENASYSSLVDSSGF 405
             N  S +D  ++ TA DENASYSSLV S+GF
Sbjct: 1239 GNGASNRDGEKRPTASDENASYSSLVGSTGF 1269


>ref|XP_003633922.1| PREDICTED: tubulin-specific chaperone D isoform 2 [Vitis vinifera]
          Length = 1228

 Score =  196 bits (498), Expect = 6e-48
 Identities = 100/151 (66%), Positives = 123/151 (81%), Gaps = 1/151 (0%)
 Frame = -1

Query: 854  AAVLDTLAVELKGSKDFSKLYTGISILGYIASVLNQINSLAFSQLISFLGHRYPKIRKAS 675
            A VLD+LAVELK +KDFSKLY GI+ILGYIASV   +N+ AFS L++FLGHRYPKIRKAS
Sbjct: 1078 AGVLDSLAVELKATKDFSKLYAGIAILGYIASVPESVNTRAFSHLLTFLGHRYPKIRKAS 1137

Query: 674  ADQSYLVLLQNENVISGDKIDKALEVISETCWEGDIEEAKHQRSQLYDLVGLEVGTILKT 495
            A+Q YLVLLQN  +++ DK++KALE+ISETCWEGDIEEAK +R +L+D+ GLE G + K 
Sbjct: 1138 AEQVYLVLLQNGELVTEDKMEKALEIISETCWEGDIEEAKQRRLELHDMAGLETGLLPKI 1197

Query: 494  TNKESIKDAIRKATA-DENASYSSLVDSSGF 405
             N  S +D  ++ TA DENASYSSLV S+GF
Sbjct: 1198 GNGASNRDGEKRPTASDENASYSSLVGSTGF 1228


>emb|CBI38891.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score =  196 bits (498), Expect = 6e-48
 Identities = 100/151 (66%), Positives = 123/151 (81%), Gaps = 1/151 (0%)
 Frame = -1

Query: 854  AAVLDTLAVELKGSKDFSKLYTGISILGYIASVLNQINSLAFSQLISFLGHRYPKIRKAS 675
            A VLD+LAVELK +KDFSKLY GI+ILGYIASV   +N+ AFS L++FLGHRYPKIRKAS
Sbjct: 1105 AGVLDSLAVELKATKDFSKLYAGIAILGYIASVPESVNTRAFSHLLTFLGHRYPKIRKAS 1164

Query: 674  ADQSYLVLLQNENVISGDKIDKALEVISETCWEGDIEEAKHQRSQLYDLVGLEVGTILKT 495
            A+Q YLVLLQN  +++ DK++KALE+ISETCWEGDIEEAK +R +L+D+ GLE G + K 
Sbjct: 1165 AEQVYLVLLQNGELVTEDKMEKALEIISETCWEGDIEEAKQRRLELHDMAGLETGLLPKI 1224

Query: 494  TNKESIKDAIRKATA-DENASYSSLVDSSGF 405
             N  S +D  ++ TA DENASYSSLV S+GF
Sbjct: 1225 GNGASNRDGEKRPTASDENASYSSLVGSTGF 1255


>ref|XP_003555220.1| PREDICTED: tubulin-specific chaperone D-like [Glycine max]
          Length = 1257

 Score =  194 bits (494), Expect = 2e-47
 Identities = 98/150 (65%), Positives = 125/150 (83%), Gaps = 1/150 (0%)
 Frame = -1

Query: 851  AVLDTLAVELKGSKDFSKLYTGISILGYIASVLNQINSLAFSQLISFLGHRYPKIRKASA 672
            AVLD+L+ ELKGSKDFSKLY GI+ILGY+ASV   IN  AFSQL++FLGHRYPKIRKASA
Sbjct: 1108 AVLDSLSFELKGSKDFSKLYAGIAILGYVASVQEPINMRAFSQLLNFLGHRYPKIRKASA 1167

Query: 671  DQSYLVLLQNENVISGDKIDKALEVISETCWEGDIEEAKHQRSQLYDLVGLEVGTILKTT 492
            +Q YLVLL+N ++++ DKIDKALE+ISETCW+GD++ AKHQR +  ++VGLEVG++   +
Sbjct: 1168 EQLYLVLLENGDLVAEDKIDKALEIISETCWDGDMDSAKHQRLKFSEIVGLEVGSLGNNS 1227

Query: 491  NKESIKDAIRKAT-ADENASYSSLVDSSGF 405
            +  S K + +K T  DENASYSSLV++SGF
Sbjct: 1228 DGTSRKTSSKKPTDLDENASYSSLVEASGF 1257


Top