BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026676
         (1169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera]   313   7e-83
ref|XP_002512332.1| pentatricopeptide repeat-containing protein,...   302   1e-79
ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251...   300   4e-79
emb|CBI25450.3| unnamed protein product [Vitis vinifera]              293   6e-77
ref|NP_181553.1| pentatricopeptide repeat-containing protein [Ar...   292   1e-76

>emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera]
          Length = 330

 Score =  313 bits (801), Expect = 7e-83
 Identities = 164/337 (48%), Positives = 234/337 (69%), Gaps = 2/337 (0%)
 Frame = -1

Query: 1118 MFILRKTLLNPSTKIPSSPFHF--TSRFFSNETNFYPFTKTPKRFDTDIPTSAFYDKLID 945
            M ILRK     + K P+SPF    TSRFF+        T+ P  ++   PT A+YD LI+
Sbjct: 1    MSILRKL----ARKNPNSPFLLCNTSRFFN--------TQNPNPYE---PTVAYYDNLIN 45

Query: 944  EAGRSRDHTTLYHVLNKRYKDGCFNTSKTFKFLTETNAHFNTDLDDLVHIICKVDKGFAR 765
             AGR+RD  ++ ++LNKR +DGCFNT+ TF F+T T+A  +  LD+L   +  +DKGF R
Sbjct: 46   TAGRNRDFASVCNLLNKRVRDGCFNTNHTFDFITNTDAGLSV-LDELSQALAHLDKGFXR 104

Query: 764  KNAFDCLITCLCKSDCVNESVRVIESMIEKEVGVNAVTFWPLLNTLTRKRRIDEAWGVVE 585
            K+A+D LI  LC+   V+ES+R++++M++ + GVNA TF P+LN LTRKR+++EAW V+ 
Sbjct: 105  KSAYDSLIARLCRLKRVDESLRLVDTMVQSDHGVNACTFHPILNVLTRKRKMEEAWRVMT 164

Query: 584  KMREYNVCVDITAYNFILMGHCFEGDMKKAVEVLEKILEQGLKVDTRTYDALVMGACRAG 405
             MRE  V  D+TAYN++L  +CF G+++ AV VL ++ E+G+  D RTYDALV+GAC+AG
Sbjct: 165  IMRESGVSPDVTAYNYLLTAYCFTGNLEAAVGVLTEMEEEGMAADARTYDALVLGACKAG 224

Query: 404  KVEGALLLLRKMEEEGVRVLYCTHVHVITSLLGMGCFKLAFEFVMAFAGRDKALDKENFG 225
            KVEGA+++LR+ME++GV +LY TH HVI  LL +G +  A EFVM   G+DK LD+E+FG
Sbjct: 225  KVEGAMVVLRRMEDDGVPILYSTHAHVINGLLKLGYYAQAVEFVMICGGKDKKLDEESFG 284

Query: 224  FLLNCLIKRRRVEEAKLVFFEMEERGLAMGEKLMKEY 114
             L + LI  +R EEAKLV  EM  RG+ M    ++++
Sbjct: 285  ILGSRLINLKRFEEAKLVLKEMRRRGIVMRSNELQDF 321


>ref|XP_002512332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548293|gb|EEF49784.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  302 bits (773), Expect = 1e-79
 Identities = 144/286 (50%), Positives = 208/286 (72%)
 Frame = -1

Query: 983  DIPTSAFYDKLIDEAGRSRDHTTLYHVLNKRYKDGCFNTSKTFKFLTETNAHFNTDLDDL 804
            D PT+A+YD L++ AG  RD  TL+H+LNKR +D CFNT+ TFKF+T T+   +  LDDL
Sbjct: 323  DKPTAAYYDGLVNAAGHERDFKTLHHLLNKRVRDHCFNTTNTFKFITNTDNSLSV-LDDL 381

Query: 803  VHIICKVDKGFARKNAFDCLITCLCKSDCVNESVRVIESMIEKEVGVNAVTFWPLLNTLT 624
            +  + ++DKG  R +A++ LI  LCK D + ES+ ++  M +++ G++  +F P+L++LT
Sbjct: 382  IQTLARLDKGIPRMSAYNMLIARLCKLDRIQESLHIVHIMADEQYGLSTCSFHPILSSLT 441

Query: 623  RKRRIDEAWGVVEKMREYNVCVDITAYNFILMGHCFEGDMKKAVEVLEKILEQGLKVDTR 444
            +K++++++W V+E MR   V  D+TA+N++L  +C+ G++  A +V+++I E+GL  D R
Sbjct: 442  QKKKMEDSWKVIEMMRAIGVLPDLTAFNYLLTAYCYNGNLVDACKVMKRIEEEGLGADAR 501

Query: 443  TYDALVMGACRAGKVEGALLLLRKMEEEGVRVLYCTHVHVITSLLGMGCFKLAFEFVMAF 264
            TYDALV+GACR GKVE AL++LR+M ++GV VLY THVHVI +LL +GC+  A +FVM F
Sbjct: 502  TYDALVLGACRTGKVEAALVVLRRMVDDGVHVLYSTHVHVINALLRLGCYVQATKFVMIF 561

Query: 263  AGRDKALDKENFGFLLNCLIKRRRVEEAKLVFFEMEERGLAMGEKL 126
             GRD A D E FG L + LIK  R EEAKLV  EMEERGL MG+KL
Sbjct: 562  GGRDIAFDTEIFGILASKLIKLERFEEAKLVLKEMEERGLVMGDKL 607


>ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251820 [Vitis vinifera]
          Length = 613

 Score =  300 bits (769), Expect = 4e-79
 Identities = 158/317 (49%), Positives = 223/317 (70%), Gaps = 2/317 (0%)
 Frame = -1

Query: 1118 MFILRKTLLNPSTKIPSSPFHF--TSRFFSNETNFYPFTKTPKRFDTDIPTSAFYDKLID 945
            M ILRK     + K P+SPF    TSRFF+        T+ P  ++   PT A+YD LI+
Sbjct: 1    MSILRKL----ARKNPNSPFLLCNTSRFFN--------TQNPNPYE---PTVAYYDNLIN 45

Query: 944  EAGRSRDHTTLYHVLNKRYKDGCFNTSKTFKFLTETNAHFNTDLDDLVHIICKVDKGFAR 765
             AGR+RD  ++ ++LNKR +DGCFNT+ TF F+T T+A  +  LD+L   +  +DKGF R
Sbjct: 46   TAGRNRDFASVCNLLNKRVRDGCFNTNHTFDFITNTDAGLSV-LDELSQALAHLDKGFLR 104

Query: 764  KNAFDCLITCLCKSDCVNESVRVIESMIEKEVGVNAVTFWPLLNTLTRKRRIDEAWGVVE 585
            K+A+D LI  LC+   V+ES+R++++M++ + GVNA TF P+LN LTRKR+++EAW V+ 
Sbjct: 105  KSAYDSLIARLCRLKRVDESLRLVDTMVQSDHGVNACTFHPILNVLTRKRKMEEAWRVMT 164

Query: 584  KMREYNVCVDITAYNFILMGHCFEGDMKKAVEVLEKILEQGLKVDTRTYDALVMGACRAG 405
             MRE  V  D+TAYN++L  +CF G+++ AV VL ++ E+G+  D RTYDALV+GAC+AG
Sbjct: 165  IMRESGVSPDVTAYNYLLTAYCFTGNLEAAVGVLTEMEEEGMAADARTYDALVLGACKAG 224

Query: 404  KVEGALLLLRKMEEEGVRVLYCTHVHVITSLLGMGCFKLAFEFVMAFAGRDKALDKENFG 225
            KVEGA+++LR+ME++GV +LY TH HVI  LL +G +  A EFVM   G+DK LD+E+FG
Sbjct: 225  KVEGAMVVLRRMEDDGVPILYSTHAHVINGLLKLGYYAQAVEFVMICGGKDKKLDEESFG 284

Query: 224  FLLNCLIKRRRVEEAKL 174
             L + LI  +R EEAKL
Sbjct: 285  ILGSRLINLKRFEEAKL 301


>emb|CBI25450.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  293 bits (750), Expect = 6e-77
 Identities = 154/314 (49%), Positives = 219/314 (69%), Gaps = 2/314 (0%)
 Frame = -1

Query: 1118 MFILRKTLLNPSTKIPSSPFHF--TSRFFSNETNFYPFTKTPKRFDTDIPTSAFYDKLID 945
            M ILRK     + K P+SPF    TSRFF+        T+ P  ++   PT A+YD LI+
Sbjct: 1    MSILRKL----ARKNPNSPFLLCNTSRFFN--------TQNPNPYE---PTVAYYDNLIN 45

Query: 944  EAGRSRDHTTLYHVLNKRYKDGCFNTSKTFKFLTETNAHFNTDLDDLVHIICKVDKGFAR 765
             AGR+RD  ++ ++LNKR +DGCFNT+ TF F+T T+A  +  LD+L   +  +DKGF R
Sbjct: 46   TAGRNRDFASVCNLLNKRVRDGCFNTNHTFDFITNTDAGLSV-LDELSQALAHLDKGFLR 104

Query: 764  KNAFDCLITCLCKSDCVNESVRVIESMIEKEVGVNAVTFWPLLNTLTRKRRIDEAWGVVE 585
            K+A+D LI  LC+   V+ES+R++++M++ + GVNA TF P+LN LTRKR+++EAW V+ 
Sbjct: 105  KSAYDSLIARLCRLKRVDESLRLVDTMVQSDHGVNACTFHPILNVLTRKRKMEEAWRVMT 164

Query: 584  KMREYNVCVDITAYNFILMGHCFEGDMKKAVEVLEKILEQGLKVDTRTYDALVMGACRAG 405
             MRE  V  D+TAYN++L  +CF G+++ AV VL ++ E+G+  D RTYDALV+GAC+AG
Sbjct: 165  IMRESGVSPDVTAYNYLLTAYCFTGNLEAAVGVLTEMEEEGMAADARTYDALVLGACKAG 224

Query: 404  KVEGALLLLRKMEEEGVRVLYCTHVHVITSLLGMGCFKLAFEFVMAFAGRDKALDKENFG 225
            KVEGA+++LR+ME++GV +LY TH HVI  LL +G +  A EFVM   G+DK LD+E+FG
Sbjct: 225  KVEGAMVVLRRMEDDGVPILYSTHAHVINGLLKLGYYAQAVEFVMICGGKDKKLDEESFG 284

Query: 224  FLLNCLIKRRRVEE 183
             L + LI  +R  E
Sbjct: 285  ILGSRLINLKRTME 298


>ref|NP_181553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75265350|sp|Q9S733.1|PP196_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g40240, mitochondrial; Flags: Precursor
           gi|4587998|gb|AAD25939.1|AF085279_12 hypothetical
           protein [Arabidopsis thaliana] gi|4586041|gb|AAD25659.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|28393486|gb|AAO42164.1| unknown protein [Arabidopsis
           thaliana] gi|28973567|gb|AAO64108.1| unknown protein
           [Arabidopsis thaliana] gi|110737021|dbj|BAF00465.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|330254707|gb|AEC09801.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 351

 Score =  292 bits (747), Expect = 1e-76
 Identities = 149/285 (52%), Positives = 204/285 (71%)
 Frame = -1

Query: 962 YDKLIDEAGRSRDHTTLYHVLNKRYKDGCFNTSKTFKFLTETNAHFNTDLDDLVHIICKV 783
           +DKLI+EAG S D  T+  +LN R   G FNTS TFKFLT T A +++ L+DL  ++ ++
Sbjct: 42  FDKLINEAGSSGDFETVRRLLNNRIVLGSFNTSDTFKFLTNT-ASYSSYLEDLRRVLPQI 100

Query: 782 DKGFARKNAFDCLITCLCKSDCVNESVRVIESMIEKEVGVNAVTFWPLLNTLTRKRRIDE 603
           D GF+RKNA+D LI+ LCK   +++++ VI  M    +G+   T+ P+L +LTRK +I+E
Sbjct: 101 DGGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEE 160

Query: 602 AWGVVEKMREYNVCVDITAYNFILMGHCFEGDMKKAVEVLEKILEQGLKVDTRTYDALVM 423
           AW VVE MR  +V +D+TAYN+ L  HC++G+++ A EV+ KI E G   D+R+YDALV+
Sbjct: 161 AWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVL 220

Query: 422 GACRAGKVEGALLLLRKMEEEGVRVLYCTHVHVITSLLGMGCFKLAFEFVMAFAGRDKAL 243
           GACRAGKVE A+ +LR+MEE+GV VLY TH HVIT L+  G + L  EFVMA+AG+D  L
Sbjct: 221 GACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYYALGLEFVMAYAGKDLRL 280

Query: 242 DKENFGFLLNCLIKRRRVEEAKLVFFEMEERGLAMGEKLMKEYEG 108
           D E+FGFL   L+KR+R EEA +V  EM  RGL MG++L + YEG
Sbjct: 281 DSESFGFLAGKLVKRKRYEEAMIVVKEMVMRGLRMGDELRQFYEG 325