BLASTX nr result

ID: Coptis23_contig00026674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026674
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532988.1| conserved hypothetical protein [Ricinus comm...   184   6e-45
ref|XP_002278131.2| PREDICTED: probable LRR receptor-like serine...   183   1e-44
emb|CBI22045.3| unnamed protein product [Vitis vinifera]              183   1e-44
ref|XP_004140247.1| PREDICTED: probable LRR receptor-like serine...   183   1e-44
ref|XP_002306015.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42

>ref|XP_002532988.1| conserved hypothetical protein [Ricinus communis]
           gi|223527234|gb|EEF29396.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 941

 Score =  184 bits (467), Expect = 6e-45
 Identities = 86/122 (70%), Positives = 105/122 (86%)
 Frame = +3

Query: 3   SMPSEWATMQLEELSVMGNRLSGPFPKVLSSIITLKNLSIEGNHFSGILPAELGNLINLE 182
           S+PS+WATM+L +LS MGN+LSGPFPK L++I TLKNLSIEGN+FSG +P E+G LINLE
Sbjct: 39  SIPSQWATMRLVDLSFMGNQLSGPFPKALTNITTLKNLSIEGNNFSGPIPPEIGKLINLE 98

Query: 183 KLVISSNQFTGQLPKRLANLINLIDLRVSDNNISGRVPDFIRNWTQMQKLHIQGSSLEGP 362
           KL +SSN FTG+LP+ LA L+NL D+R+SD N SG++PDFI  W Q+QKLHIQGSSLEGP
Sbjct: 99  KLTLSSNAFTGKLPRELAKLVNLTDMRISDANFSGQIPDFISRWKQIQKLHIQGSSLEGP 158

Query: 363 IP 368
           IP
Sbjct: 159 IP 160


>ref|XP_002278131.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g07650 [Vitis vinifera]
          Length = 999

 Score =  183 bits (465), Expect = 1e-44
 Identities = 86/122 (70%), Positives = 106/122 (86%)
 Frame = +3

Query: 3   SMPSEWATMQLEELSVMGNRLSGPFPKVLSSIITLKNLSIEGNHFSGILPAELGNLINLE 182
           S+PS+WATM+L ELS+MGNRLSGPFPKVL++I TL+NLSIEGN FSG +P E+G LI +E
Sbjct: 128 SIPSQWATMRLVELSLMGNRLSGPFPKVLTNITTLRNLSIEGNLFSGPIPPEIGKLIRIE 187

Query: 183 KLVISSNQFTGQLPKRLANLINLIDLRVSDNNISGRVPDFIRNWTQMQKLHIQGSSLEGP 362
           K+V+SSN FTG+LP  LA L NL D+R++DN+ SGR+P+FI NWT +QKLHIQGSSLEGP
Sbjct: 188 KMVLSSNAFTGELPVALAKLTNLTDMRINDNHFSGRIPEFIGNWTHVQKLHIQGSSLEGP 247

Query: 363 IP 368
           IP
Sbjct: 248 IP 249


>emb|CBI22045.3| unnamed protein product [Vitis vinifera]
          Length = 1011

 Score =  183 bits (465), Expect = 1e-44
 Identities = 86/122 (70%), Positives = 106/122 (86%)
 Frame = +3

Query: 3   SMPSEWATMQLEELSVMGNRLSGPFPKVLSSIITLKNLSIEGNHFSGILPAELGNLINLE 182
           S+PS+WATM+L ELS+MGNRLSGPFPKVL++I TL+NLSIEGN FSG +P E+G LI +E
Sbjct: 122 SIPSQWATMRLVELSLMGNRLSGPFPKVLTNITTLRNLSIEGNLFSGPIPPEIGKLIRIE 181

Query: 183 KLVISSNQFTGQLPKRLANLINLIDLRVSDNNISGRVPDFIRNWTQMQKLHIQGSSLEGP 362
           K+V+SSN FTG+LP  LA L NL D+R++DN+ SGR+P+FI NWT +QKLHIQGSSLEGP
Sbjct: 182 KMVLSSNAFTGELPVALAKLTNLTDMRINDNHFSGRIPEFIGNWTHVQKLHIQGSSLEGP 241

Query: 363 IP 368
           IP
Sbjct: 242 IP 243


>ref|XP_004140247.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g07650-like [Cucumis sativus]
           gi|449481221|ref|XP_004156118.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g07650-like [Cucumis sativus]
          Length = 1028

 Score =  183 bits (464), Expect = 1e-44
 Identities = 85/121 (70%), Positives = 104/121 (85%)
 Frame = +3

Query: 6   MPSEWATMQLEELSVMGNRLSGPFPKVLSSIITLKNLSIEGNHFSGILPAELGNLINLEK 185
           +PS+WATM+L ELS MGN+LSGPFPKVL++I TL+NLSIEGN FSG +P E+G L+NLEK
Sbjct: 136 VPSQWATMRLVELSFMGNKLSGPFPKVLTNITTLRNLSIEGNQFSGRIPPEIGKLVNLEK 195

Query: 186 LVISSNQFTGQLPKRLANLINLIDLRVSDNNISGRVPDFIRNWTQMQKLHIQGSSLEGPI 365
           LV+SSN  TG+LPK LA L NL D+R+SDNN SG++P+FI NW Q++KLHIQG SLEGPI
Sbjct: 196 LVLSSNGLTGELPKGLAKLSNLTDMRISDNNFSGKIPEFISNWAQIEKLHIQGCSLEGPI 255

Query: 366 P 368
           P
Sbjct: 256 P 256


>ref|XP_002306015.1| predicted protein [Populus trichocarpa] gi|222848979|gb|EEE86526.1|
           predicted protein [Populus trichocarpa]
          Length = 977

 Score =  176 bits (445), Expect = 2e-42
 Identities = 79/121 (65%), Positives = 101/121 (83%)
 Frame = +3

Query: 6   MPSEWATMQLEELSVMGNRLSGPFPKVLSSIITLKNLSIEGNHFSGILPAELGNLINLEK 185
           +P +W T++LEE SVMGNRLSGPFPKVL+++ TL+NLSIEGNHFSG +P E+G LINL+K
Sbjct: 94  IPPQWGTLRLEEFSVMGNRLSGPFPKVLTNMTTLRNLSIEGNHFSGPIPPEIGRLINLQK 153

Query: 186 LVISSNQFTGQLPKRLANLINLIDLRVSDNNISGRVPDFIRNWTQMQKLHIQGSSLEGPI 365
           LV SSN  TG LP  L  L+NL D+R++DNN SG++P FI  WT++QKLH+QG+SL+GPI
Sbjct: 154 LVFSSNALTGNLPAELGKLVNLTDVRINDNNFSGKLPTFISKWTKVQKLHLQGTSLKGPI 213

Query: 366 P 368
           P
Sbjct: 214 P 214



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/88 (34%), Positives = 49/88 (55%)
 Frame = +3

Query: 105 LKNLSIEGNHFSGILPAELGNLINLEKLVISSNQFTGQLPKRLANLINLIDLRVSDNNIS 284
           L +++++  + SGI+P E      L++L +S N FTG +P +   L  L +  V  N +S
Sbjct: 56  LVSIALKSQNLSGIIPPEFSKFRYLKQLDLSRNLFTGVIPPQWGTL-RLEEFSVMGNRLS 114

Query: 285 GRVPDFIRNWTQMQKLHIQGSSLEGPIP 368
           G  P  + N T ++ L I+G+   GPIP
Sbjct: 115 GPFPKVLTNMTTLRNLSIEGNHFSGPIP 142


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