BLASTX nr result

ID: Coptis23_contig00026673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026673
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274395.1| PREDICTED: uncharacterized protein LOC100248...    99   7e-19
ref|XP_002309041.1| predicted protein [Populus trichocarpa] gi|2...    81   3e-13
ref|XP_002531334.1| conserved hypothetical protein [Ricinus comm...    79   8e-13
gb|EEC78398.1| hypothetical protein OsI_18185 [Oryza sativa Indi...    77   5e-12
gb|AAS75247.1| unknown protein [Oryza sativa Japonica Group] gi|...    74   3e-11

>ref|XP_002274395.1| PREDICTED: uncharacterized protein LOC100248230 isoform 3 [Vitis
           vinifera] gi|225439745|ref|XP_002274341.1| PREDICTED:
           uncharacterized protein LOC100248230 isoform 1 [Vitis
           vinifera] gi|147801762|emb|CAN77855.1| hypothetical
           protein VITISV_037693 [Vitis vinifera]
           gi|297741478|emb|CBI32610.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 74/186 (39%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
 Frame = +2

Query: 35  SEEKASNLVSLDEKDEVPDISLHMKSHTKSENLSAECPISLPTFTKPVSAMKGSREKVGI 214
           S  K S   S  E+D  PD +L      KS +       SLPT  K VSAMKGSR+K GI
Sbjct: 109 SSGKTSLAGSSGEEDGNPDATLQENYSLKSLSPDISRTASLPTPLKLVSAMKGSRDKEGI 168

Query: 215 PLKKLSVTWAPDVYDTPCNSISHMVKS--HSSQRSRNKKDSKHRHXXXXXXXXXXXXR-- 382
           PLKKL+VTWAPDVYD P   +SH V++     Q   N+K+ KH+             +  
Sbjct: 169 PLKKLNVTWAPDVYDPPPTIVSHTVRNCKKQQQSKNNRKNGKHKQKGKAARGSNGKDKKQ 228

Query: 383 YKKHAGKTDYRLKSSPTSVRL---SYPSSARLLYGDYN----QTKFGSSFLRTSLAEVHV 541
            +K  G  D   +S     +L   ++  S+R L  D+         GSSFLR S+A+VH 
Sbjct: 229 LRKIVGSGDRGFRSFEVRDKLIASNFIDSSREL-EDFEVGSPDGYCGSSFLRKSVAKVHF 287

Query: 542 TVAEAT 559
           +VAEAT
Sbjct: 288 SVAEAT 293


>ref|XP_002309041.1| predicted protein [Populus trichocarpa] gi|222855017|gb|EEE92564.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 61/182 (33%), Positives = 85/182 (46%), Gaps = 4/182 (2%)
 Frame = +2

Query: 23  PSSCSEEKASNLVSLDEKDEVPDISLHMKSHTKSENL-SAECPISLPTFTKPVSAMKGSR 199
           P     + +S++   DE+D  P+  L +    +  +L S   PI        VSAMKGSR
Sbjct: 55  PVKKRHDNSSSMAPSDEEDNEPETGLQLLFPEEFPHLNSTRLPI--------VSAMKGSR 106

Query: 200 EKVGIPLKKLSVTWAPDVYDTPCNSISHMVKSHSSQRSRNKKDSKHRHXXXXXXXXXXXX 379
           EK G   +KL+V+WAPDVYD   NS+SH VKS   + SR  +D  + H            
Sbjct: 107 EKQGGSPRKLTVSWAPDVYDPIPNSLSHSVKSKQKKSSRKDRDKDNNHNKKNGKKGQKGS 166

Query: 380 RYKKHAGKTDYRLKSSPTSVRLSY---PSSARLLYGDYNQTKFGSSFLRTSLAEVHVTVA 550
             K   GK   + + S       Y    +     +G  +    GSSFL+ S A+ H +VA
Sbjct: 167 SSKGLGGKDKKQFRKSGGRSDKCYKTMDAPEDTDFGVGSPDYCGSSFLKNSGAKFHYSVA 226

Query: 551 EA 556
           EA
Sbjct: 227 EA 228


>ref|XP_002531334.1| conserved hypothetical protein [Ricinus communis]
           gi|223529056|gb|EEF31041.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 234

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 65/188 (34%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
 Frame = +2

Query: 26  SSCSEEKASNLVSLDEKDEVPDISLHMKSHTKSENLSAECPISLPTFTKPVSAMKGSREK 205
           + C E+   NL  L E+D+ P+        T  + LS+E PI        VSAMKGSREK
Sbjct: 62  TKCMEKFPGNL--LVEEDDEPE--------TAMQQLSSEGPIQPAVLL--VSAMKGSREK 109

Query: 206 VGIPLKKLSVTWAPDVYDTPCNSISHMVKSHSSQ----RSRNKKDSKHR-------HXXX 352
           +G  L+KL+V+WAPDVYD   NS+SH VKS   +    R R+K+ + ++           
Sbjct: 110 LGASLRKLTVSWAPDVYDPIPNSLSHTVKSKQKKSKKDRDRDKESNNYKKNGKRGQKGNS 169

Query: 353 XXXXXXXXXRYKKHAGKTDYRLKSSPTSVRLSYPSSARLLYGDYNQTKFGSSFLRTSLAE 532
                    + +K  G++D   K+   S          +   DY     GSSFL+ S A 
Sbjct: 170 RGGGGKDKKQLRKAGGRSDRGYKTLSISESPDNLDEFNVGSPDY----CGSSFLKKSPAN 225

Query: 533 VHVTVAEA 556
            H +VAEA
Sbjct: 226 FHYSVAEA 233


>gb|EEC78398.1| hypothetical protein OsI_18185 [Oryza sativa Indica Group]
          Length = 264

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 56/158 (35%), Positives = 80/158 (50%), Gaps = 18/158 (11%)
 Frame = +2

Query: 140 ECPISLPTFTKPVSAMKGSREKVGI--PLKKLSVTWAPDVYDTPCNSISHMVKSHSSQRS 313
           E  +SLP   K +SAMKGSR+K G+  P +   V WAPDVYD P  S+ H V +   +RS
Sbjct: 108 ERSVSLPPTLKIISAMKGSRQKNGMASPTESRHVKWAPDVYDPPVTSVCHSVNNSYQRRS 167

Query: 314 RNKKDSKHRHXXXXXXXXXXXXRYK---------KHAGKTDYRLKSSPTSVRLSYPSSAR 466
           +++K  K++              ++         +  G+ D RLK + T+   S P    
Sbjct: 168 KSRKKDKNKQKQKQKQKGRSKKNHQNAIQSSAVLQAPGEFD-RLKDAETTSSNSAPDDLN 226

Query: 467 ------LLYGDYNQ-TKFGSSFLRTSLAEVHVTVAEAT 559
                 L YG  +Q  K GSSFLR S A++H + AEA+
Sbjct: 227 KHETDILDYGISSQDAKCGSSFLRESAAKMHFSTAEAS 264


>gb|AAS75247.1| unknown protein [Oryza sativa Japonica Group]
           gi|215701500|dbj|BAG92924.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222629960|gb|EEE62092.1| hypothetical protein
           OsJ_16876 [Oryza sativa Japonica Group]
          Length = 264

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 56/158 (35%), Positives = 79/158 (50%), Gaps = 18/158 (11%)
 Frame = +2

Query: 140 ECPISLPTFTKPVSAMKGSREKVGIPLKKLS--VTWAPDVYDTPCNSISHMVKSHSSQRS 313
           E  +SLP   K +SAMKGSR+K G+     S  V WAPDVYD P  S+ H V +   +RS
Sbjct: 108 ERSVSLPPTLKIISAMKGSRQKNGMASSTESRHVKWAPDVYDPPVTSVCHSVNNSYQRRS 167

Query: 314 RNKKDSKHRHXXXXXXXXXXXXRYK---------KHAGKTDYRLKSSPTSVRLSYPSSAR 466
           +++K  K++              ++         +  G+ D RLK + T+   S P    
Sbjct: 168 KSRKKDKNKQKQKQKQKGRSKKNHQNAIQSSAVLQAPGEFD-RLKDAETTSSNSAPDDLN 226

Query: 467 ------LLYGDYNQ-TKFGSSFLRTSLAEVHVTVAEAT 559
                 L YG  +Q  K GSSFLR S A++H + AEA+
Sbjct: 227 KHETDILDYGISSQDAKCGSSFLRESAAKMHFSTAEAS 264


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