BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026666
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617724.1| Pentatricopeptide repeat-containing protein ...    65   8e-09
gb|ABD96889.1| hypothetical protein [Cleome spinosa]                   62   5e-08
emb|CBI26162.3| unnamed protein product [Vitis vinifera]               60   1e-07
ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519059|gb|AET00683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 861

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/74 (47%), Positives = 45/74 (60%)
 Frame = +1

Query: 1   PDSRCCNVVFDVLVQAKASKVAKMLIGDMDFVPDIGSLELFVVCLCEDGDVDEGFEFFLY 180
           PD   CN +FD LV A A K AK L+   DFVP   SLE +V  L E+G V+E F+ F+ 
Sbjct: 95  PDQSSCNALFDALVDAGAVKAAKSLLEYPDFVPKNDSLEGYVRLLGENGMVEEVFDVFVS 154

Query: 181 LRKAGYVPSLGVCN 222
           L+K G++PS    N
Sbjct: 155 LKKVGFLPSASSFN 168


>gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/76 (39%), Positives = 46/76 (60%)
 Frame = +1

Query: 1   PDSRCCNVVFDVLVQAKASKVAKMLIGDMDFVPDIGSLELFVVCLCEDGDVDEGFEFFLY 180
           PD    N++F+ L+ AKA + AKM+     F+PD  SLE +V CLC  G ++E  E +  
Sbjct: 122 PDPISSNMLFEALLDAKAVRAAKMVRDIAGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQ 181

Query: 181 LRKAGYVPSLGVCNNM 228
           L++AG   S+  CN++
Sbjct: 182 LKEAGIRISIVACNSI 197


>emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/76 (39%), Positives = 42/76 (55%)
 Frame = +1

Query: 1   PDSRCCNVVFDVLVQAKASKVAKMLIGDMDFVPDIGSLELFVVCLCEDGDVDEGFEFFLY 180
           PDS  CNV+FD LV+A A   AK  +   +F P   SLE ++ CLC+ G V+E    F  
Sbjct: 158 PDSSSCNVLFDALVEAGACNAAKSFLDSTNFNPKPASLEAYIRCLCKGGLVEEAISVFGQ 217

Query: 181 LRKAGYVPSLGVCNNM 228
           L+  G   S+   N++
Sbjct: 218 LKGIGVCASIATWNSV 233


>ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 638

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/74 (39%), Positives = 42/74 (56%)
 Frame = +1

Query: 1   PDSRCCNVVFDVLVQAKASKVAKMLIGDMDFVPDIGSLELFVVCLCEDGDVDEGFEFFLY 180
           P    CN +FD L++AKA   AK  +   +F P+  SLE ++ C+CE G V+E    F  
Sbjct: 157 PHPVSCNKLFDALLEAKACVPAKSFLYSFEFSPEPASLENYIRCVCEGGLVEEAVYTFDM 216

Query: 181 LRKAGYVPSLGVCN 222
           L++AGY P +   N
Sbjct: 217 LKEAGYRPYVETWN 230


>ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 602

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/74 (39%), Positives = 42/74 (56%)
 Frame = +1

Query: 1   PDSRCCNVVFDVLVQAKASKVAKMLIGDMDFVPDIGSLELFVVCLCEDGDVDEGFEFFLY 180
           P    CN +FD L++AKA   AK  +   +F P+  SLE ++ C+CE G V+E    F  
Sbjct: 121 PHPVSCNKLFDALLEAKACVPAKSFLYSFEFSPEPASLENYIRCVCEGGLVEEAVYTFDM 180

Query: 181 LRKAGYVPSLGVCN 222
           L++AGY P +   N
Sbjct: 181 LKEAGYRPYVETWN 194