BLASTX nr result

ID: Coptis23_contig00026649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026649
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266444.2| PREDICTED: endoglucanase 12-like [Vitis vini...   225   3e-57
emb|CBI18623.3| unnamed protein product [Vitis vinifera]              225   3e-57
gb|AFZ78629.1| korrigan [Populus tomentosa]                           208   4e-52
ref|XP_002312211.1| predicted protein [Populus trichocarpa] gi|2...   208   5e-52
ref|XP_002514768.1| endo-1,4-beta-glucanase, putative [Ricinus c...   207   6e-52

>ref|XP_002266444.2| PREDICTED: endoglucanase 12-like [Vitis vinifera]
          Length = 536

 Score =  225 bits (574), Expect = 3e-57
 Identities = 109/172 (63%), Positives = 127/172 (73%)
 Frame = +3

Query: 3   LQYVANAAFLASLFADYMNATGVPGWYCGPNFISSDKLRFFASSQVNYILGANPMNMSYL 182
           LQYVANAAFLASLF DYMNAT +PGWYCGPNFI ++ LR FA+SQ+NYILG NPM MSYL
Sbjct: 359 LQYVANAAFLASLFVDYMNATSIPGWYCGPNFIRAETLRSFATSQINYILGKNPMKMSYL 418

Query: 183 VGYGDKFPKYVYHRGASIRRPSSNTKNEKVYTCHGGWAWFDSAKPNPNEITGAMVGGPYK 362
           VGYG KFPK+V+HRGASI  P+ N K    Y+C GGW W DS  PNP+ ITGAMVGGP +
Sbjct: 419 VGYGTKFPKHVHHRGASI--PNDNKK----YSCTGGWKWRDSRNPNPHNITGAMVGGPIR 472

Query: 363 SDKFEDDRKDISHTEPTXXXXXXXXXXXXXXTTSGGIGIDRNTIFSNVSPFY 518
           +D F+D R + ++TEPT              T SGG+ ID+NTIFS V PFY
Sbjct: 473 TDNFQDIRTNYNYTEPTLAGNAGLVAALVSLTGSGGMSIDKNTIFSAVPPFY 524


>emb|CBI18623.3| unnamed protein product [Vitis vinifera]
          Length = 438

 Score =  225 bits (574), Expect = 3e-57
 Identities = 109/172 (63%), Positives = 127/172 (73%)
 Frame = +3

Query: 3   LQYVANAAFLASLFADYMNATGVPGWYCGPNFISSDKLRFFASSQVNYILGANPMNMSYL 182
           LQYVANAAFLASLF DYMNAT +PGWYCGPNFI ++ LR FA+SQ+NYILG NPM MSYL
Sbjct: 261 LQYVANAAFLASLFVDYMNATSIPGWYCGPNFIRAETLRSFATSQINYILGKNPMKMSYL 320

Query: 183 VGYGDKFPKYVYHRGASIRRPSSNTKNEKVYTCHGGWAWFDSAKPNPNEITGAMVGGPYK 362
           VGYG KFPK+V+HRGASI  P+ N K    Y+C GGW W DS  PNP+ ITGAMVGGP +
Sbjct: 321 VGYGTKFPKHVHHRGASI--PNDNKK----YSCTGGWKWRDSRNPNPHNITGAMVGGPIR 374

Query: 363 SDKFEDDRKDISHTEPTXXXXXXXXXXXXXXTTSGGIGIDRNTIFSNVSPFY 518
           +D F+D R + ++TEPT              T SGG+ ID+NTIFS V PFY
Sbjct: 375 TDNFQDIRTNYNYTEPTLAGNAGLVAALVSLTGSGGMSIDKNTIFSAVPPFY 426


>gb|AFZ78629.1| korrigan [Populus tomentosa]
          Length = 621

 Score =  208 bits (530), Expect = 4e-52
 Identities = 104/172 (60%), Positives = 125/172 (72%)
 Frame = +3

Query: 3   LQYVANAAFLASLFADYMNATGVPGWYCGPNFISSDKLRFFASSQVNYILGANPMNMSYL 182
           LQYVANAAFLASL+ DY+NAT VPG+ CGP FIS D LR FA+SQ+NYILG NPM MSY+
Sbjct: 444 LQYVANAAFLASLYVDYLNATRVPGFNCGPQFISLDVLRNFATSQINYILGDNPMKMSYV 503

Query: 183 VGYGDKFPKYVYHRGASIRRPSSNTKNEKVYTCHGGWAWFDSAKPNPNEITGAMVGGPYK 362
           VGYG KFP++V+HRGAS   PS N +    Y+C GGW W DS+KPNP+ ITGAMVGGP +
Sbjct: 504 VGYGTKFPRHVHHRGAS--TPSDNVR----YSCTGGWKWRDSSKPNPHNITGAMVGGPDR 557

Query: 363 SDKFEDDRKDISHTEPTXXXXXXXXXXXXXXTTSGGIGIDRNTIFSNVSPFY 518
            D+F D R + + TEPT              T+SGGIGI++N+IFS V P Y
Sbjct: 558 FDQFRDVRTNYNFTEPTLAGNAGLVAALVSLTSSGGIGINKNSIFSAVPPLY 609


>ref|XP_002312211.1| predicted protein [Populus trichocarpa] gi|222852031|gb|EEE89578.1|
           predicted protein [Populus trichocarpa]
           gi|347466549|gb|AEO97187.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466603|gb|AEO97214.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
          Length = 620

 Score =  208 bits (529), Expect = 5e-52
 Identities = 104/172 (60%), Positives = 124/172 (72%)
 Frame = +3

Query: 3   LQYVANAAFLASLFADYMNATGVPGWYCGPNFISSDKLRFFASSQVNYILGANPMNMSYL 182
           LQYVANAAFLASL+ DY+NAT VPG  CGP FIS D LR FA+SQ+NYILG NPM MSY+
Sbjct: 443 LQYVANAAFLASLYVDYLNATRVPGLNCGPKFISLDLLRSFATSQINYILGDNPMKMSYV 502

Query: 183 VGYGDKFPKYVYHRGASIRRPSSNTKNEKVYTCHGGWAWFDSAKPNPNEITGAMVGGPYK 362
           VGYG KFP++V+HRGAS   PS  T+    Y+C GGW W DS+KPNP+ ITGAMVGGP +
Sbjct: 503 VGYGTKFPRHVHHRGAS--TPSDKTR----YSCTGGWKWRDSSKPNPHNITGAMVGGPDR 556

Query: 363 SDKFEDDRKDISHTEPTXXXXXXXXXXXXXXTTSGGIGIDRNTIFSNVSPFY 518
            D+F D R + + TEPT              T+SGGIGID+N+IF+ V P Y
Sbjct: 557 FDQFRDVRTNYNFTEPTLAGNAGLVAALASLTSSGGIGIDKNSIFTAVPPLY 608


>ref|XP_002514768.1| endo-1,4-beta-glucanase, putative [Ricinus communis]
           gi|223545819|gb|EEF47322.1| endo-1,4-beta-glucanase,
           putative [Ricinus communis]
          Length = 624

 Score =  207 bits (528), Expect = 6e-52
 Identities = 103/172 (59%), Positives = 120/172 (69%)
 Frame = +3

Query: 3   LQYVANAAFLASLFADYMNATGVPGWYCGPNFISSDKLRFFASSQVNYILGANPMNMSYL 182
           LQYVANAAFL SLF DY+NA+G+PG  CGPNFIS   LR FA+SQ++YILG NPMNMSY+
Sbjct: 447 LQYVANAAFLTSLFVDYLNASGIPGLNCGPNFISLVDLRTFATSQIDYILGKNPMNMSYV 506

Query: 183 VGYGDKFPKYVYHRGASIRRPSSNTKNEKVYTCHGGWAWFDSAKPNPNEITGAMVGGPYK 362
           VGYG KFP++V+HR ASI        ++K Y+C GGW W DS  PNPN ITGAMVGGP +
Sbjct: 507 VGYGTKFPRHVHHRAASI------PHDKKRYSCTGGWKWRDSRNPNPNNITGAMVGGPDR 560

Query: 363 SDKFEDDRKDISHTEPTXXXXXXXXXXXXXXTTSGGIGIDRNTIFSNVSPFY 518
            DKF D R   ++TEPT              T SGG GID+NTIFS V P Y
Sbjct: 561 FDKFHDVRTSYNYTEPTLAGNAGLVAALASLTVSGGHGIDKNTIFSAVPPLY 612


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