BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026643
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38093.3| unnamed protein product [Vitis vinifera]               92   2e-20
ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    92   2e-20
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    91   7e-20
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    91   9e-20
ref|XP_002887803.1| hypothetical protein ARALYDRAFT_895889 [Arab...    91   1e-19

>emb|CBI38093.3| unnamed protein product [Vitis vinifera]
          Length = 2607

 Score = 92.4 bits (228), Expect(2) = 2e-20
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = -3

Query: 157  PLLQASFESIFPKDSPKNTRFSINYLTSIGLGGITENLREYLKSMPGLIMQQ 2
            P +Q SFESIFPKD+PKNTRFSIN+ TSIGLGGITENLREYLK+MP LIMQQ
Sbjct: 2506 PSMQDSFESIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQ 2557



 Score = 31.2 bits (69), Expect(2) = 2e-20
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = -1

Query: 216  QELTDVIGIRLLNKRLSDP 160
            QEL++ +GIRLLN+RL+DP
Sbjct: 2488 QELSEHLGIRLLNERLTDP 2506


>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
          Length = 785

 Score = 92.4 bits (228), Expect(2) = 2e-20
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = -3

Query: 157 PLLQASFESIFPKDSPKNTRFSINYLTSIGLGGITENLREYLKSMPGLIMQQ 2
           P +Q SFESIFPKD+PKNTRFSIN+ TSIGLGGITENLREYLK+MP LIMQQ
Sbjct: 684 PSMQDSFESIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQ 735



 Score = 31.2 bits (69), Expect(2) = 2e-20
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = -1

Query: 216 QELTDVIGIRLLNKRLSDP 160
           QEL++ +GIRLLN+RL+DP
Sbjct: 666 QELSEHLGIRLLNERLTDP 684


>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
          Length = 797

 Score = 90.9 bits (224), Expect(2) = 7e-20
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = -3

Query: 157 PLLQASFESIFPKDSPKNTRFSINYLTSIGLGGITENLREYLKSMPGLIMQQ 2
           P +Q SFESIFP+D+PKNTRFSIN+ TSIGLGG+TENLREYLK+MP LIMQQ
Sbjct: 697 PTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPRLIMQQ 748



 Score = 31.2 bits (69), Expect(2) = 7e-20
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = -1

Query: 216 QELTDVIGIRLLNKRLSDP 160
           QEL++ +GIRLLN+RL+DP
Sbjct: 679 QELSEHLGIRLLNERLTDP 697


>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 871

 Score = 90.5 bits (223), Expect(2) = 9e-20
 Identities = 42/52 (80%), Positives = 47/52 (90%)
 Frame = -3

Query: 157 PLLQASFESIFPKDSPKNTRFSINYLTSIGLGGITENLREYLKSMPGLIMQQ 2
           P +Q SFESIFPKD+PKNTRF IN+ TSIGLGG+TENLREYLK+MP LIMQQ
Sbjct: 774 PTMQESFESIFPKDNPKNTRFCINFFTSIGLGGLTENLREYLKNMPRLIMQQ 825



 Score = 31.2 bits (69), Expect(2) = 9e-20
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = -1

Query: 216 QELTDVIGIRLLNKRLSDP 160
           QEL++ +GIRLLN+RL+DP
Sbjct: 756 QELSEHLGIRLLNERLNDP 774


>ref|XP_002887803.1| hypothetical protein ARALYDRAFT_895889 [Arabidopsis lyrata subsp.
           lyrata] gi|297333644|gb|EFH64062.1| hypothetical protein
           ARALYDRAFT_895889 [Arabidopsis lyrata subsp. lyrata]
          Length = 897

 Score = 90.5 bits (223), Expect(2) = 1e-19
 Identities = 42/52 (80%), Positives = 47/52 (90%)
 Frame = -3

Query: 157 PLLQASFESIFPKDSPKNTRFSINYLTSIGLGGITENLREYLKSMPGLIMQQ 2
           P +Q S ESIFPKD+PKNTRF+IN+ TSIGLGGITENLREYLK+MP LIMQQ
Sbjct: 798 PTMQESLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPSLIMQQ 849



 Score = 30.8 bits (68), Expect(2) = 1e-19
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = -1

Query: 216 QELTDVIGIRLLNKRLSDP 160
           QEL++ +GIRLLN+RL DP
Sbjct: 780 QELSEHLGIRLLNERLQDP 798