BLASTX nr result

ID: Coptis23_contig00026635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026635
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514179.1| Charged multivesicular body protein 4b, puta...    55   6e-06
ref|XP_002283066.1| PREDICTED: vacuolar protein sorting-associat...    55   6e-06

>ref|XP_002514179.1| Charged multivesicular body protein 4b, putative [Ricinus communis]
           gi|223546635|gb|EEF48133.1| Charged multivesicular body
           protein 4b, putative [Ricinus communis]
          Length = 218

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/40 (70%), Positives = 30/40 (75%)
 Frame = -3

Query: 177 QFLQLATTAPAASAYVPAGRQPARPIAQKRTAEEEEFNLL 58
           Q LQ ATTAPAA   VPAGRQP RP AQK+TAEE+E   L
Sbjct: 173 QLLQPATTAPAAPVQVPAGRQPNRPAAQKQTAEEDELAAL 212


>ref|XP_002283066.1| PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2
           [Vitis vinifera] gi|147840660|emb|CAN61998.1|
           hypothetical protein VITISV_007873 [Vitis vinifera]
           gi|297738716|emb|CBI27961.3| unnamed protein product
           [Vitis vinifera]
          Length = 218

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/40 (70%), Positives = 30/40 (75%)
 Frame = -3

Query: 177 QFLQLATTAPAASAYVPAGRQPARPIAQKRTAEEEEFNLL 58
           Q LQ ATTAPAA  +VPAGRQPAR   QKRTAEE+E   L
Sbjct: 173 QLLQPATTAPAAPVHVPAGRQPARAAPQKRTAEEDELAAL 212


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