BLASTX nr result

ID: Coptis23_contig00026633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026633
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269170.1| PREDICTED: probable WRKY transcription facto...   166   2e-39
emb|CAN68573.1| hypothetical protein VITISV_023886 [Vitis vinifera]   163   1e-38
emb|CBI31090.3| unnamed protein product [Vitis vinifera]              157   9e-37
ref|XP_003534796.1| PREDICTED: probable WRKY transcription facto...   121   7e-26
ref|XP_002317080.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23

>ref|XP_002269170.1| PREDICTED: probable WRKY transcription factor 14-like [Vitis
           vinifera]
          Length = 438

 Score =  166 bits (420), Expect = 2e-39
 Identities = 95/171 (55%), Positives = 116/171 (67%), Gaps = 1/171 (0%)
 Frame = +1

Query: 1   IEEPIDNFGDPFSNMHDPLLDELGIGSSSFFDRRNSSTSSGVVKMNIEENNPSSLNSTSH 180
           ++EP+D+FGDPFSNM DPLL ELGI  S FF    SS SS + + + E+ + + +     
Sbjct: 51  VDEPLDDFGDPFSNMRDPLLHELGIAGSGFF---GSSNSSELTQTSGEDTSSNLVGGGGM 107

Query: 181 LPRTIFNEDMRRPSNIFSRMLQISPISKMSTSPCDMISTVLSSPRVANKTTTTSCSSLA- 357
             + I +EDM+RP NIFSRMLQISP ++M  SPC+       S  VA   T    S+LA 
Sbjct: 108 FGQKILDEDMKRPCNIFSRMLQISPNARMPISPCE-------SQIVAASPTGIKTSALAP 160

Query: 358 NETIKSNSSTSCSMESVAMMQISSPRNPGIKRRKSQAKKVVCIPAPAAANS 510
           N+ I  NSS  C M+S A+ QISSPRNPGIKRRKSQAKKVVCIPAPAAANS
Sbjct: 161 NDMISGNSSKGCLMDSTAL-QISSPRNPGIKRRKSQAKKVVCIPAPAAANS 210


>emb|CAN68573.1| hypothetical protein VITISV_023886 [Vitis vinifera]
          Length = 426

 Score =  163 bits (413), Expect = 1e-38
 Identities = 94/171 (54%), Positives = 115/171 (67%), Gaps = 1/171 (0%)
 Frame = +1

Query: 1   IEEPIDNFGDPFSNMHDPLLDELGIGSSSFFDRRNSSTSSGVVKMNIEENNPSSLNSTSH 180
           ++EP+D+FGDPFSNM DPL  ELGI  S FF    SS SS + + + E+ + + +     
Sbjct: 43  VDEPLDDFGDPFSNMRDPLFHELGIAGSGFF---GSSNSSELTQTSGEDISSNLVGGGGM 99

Query: 181 LPRTIFNEDMRRPSNIFSRMLQISPISKMSTSPCDMISTVLSSPRVANKTTTTSCSSLA- 357
             + I +EDM+RP NIFSRMLQISP ++M  SPC+       S  VA   T    S+LA 
Sbjct: 100 FGQKILDEDMKRPCNIFSRMLQISPNARMPISPCE-------SQIVAASPTGIKTSALAP 152

Query: 358 NETIKSNSSTSCSMESVAMMQISSPRNPGIKRRKSQAKKVVCIPAPAAANS 510
           N+ I  NSS  C M+S A+ QISSPRNPGIKRRKSQAKKVVCIPAPAAANS
Sbjct: 153 NDMISGNSSKGCLMDSTAL-QISSPRNPGIKRRKSQAKKVVCIPAPAAANS 202


>emb|CBI31090.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score =  157 bits (397), Expect = 9e-37
 Identities = 95/171 (55%), Positives = 110/171 (64%), Gaps = 1/171 (0%)
 Frame = +1

Query: 1   IEEPIDNFGDPFSNMHDPLLDELGIGSSSFFDRRNSSTSSGVVKMNIEENNPSSLNSTSH 180
           ++EP+D+FGDPFSNM DPLL ELGI  S FF    SS SSG +                 
Sbjct: 51  VDEPLDDFGDPFSNMRDPLLHELGIAGSGFF---GSSNSSGGM----------------- 90

Query: 181 LPRTIFNEDMRRPSNIFSRMLQISPISKMSTSPCDMISTVLSSPRVANKTTTTSCSSLA- 357
             + I +EDM+RP NIFSRMLQISP ++M  SPC+       S  VA   T    S+LA 
Sbjct: 91  FGQKILDEDMKRPCNIFSRMLQISPNARMPISPCE-------SQIVAASPTGIKTSALAP 143

Query: 358 NETIKSNSSTSCSMESVAMMQISSPRNPGIKRRKSQAKKVVCIPAPAAANS 510
           N+ I  NSS  C M+S A+ QISSPRNPGIKRRKSQAKKVVCIPAPAAANS
Sbjct: 144 NDMISGNSSKGCLMDSTAL-QISSPRNPGIKRRKSQAKKVVCIPAPAAANS 193


>ref|XP_003534796.1| PREDICTED: probable WRKY transcription factor 14-like [Glycine max]
          Length = 499

 Score =  121 bits (303), Expect = 7e-26
 Identities = 75/173 (43%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
 Frame = +1

Query: 19  NFGDPFSNMHDPLLDELGIGSSSFF------DRRNSSTSSGVVKMNIEENNPSSLNSTSH 180
           NFGDPFS M DP L EL + S+S +      +   ++T   V          +++ +T+H
Sbjct: 85  NFGDPFSTMRDPFLQELDMPSASAYFTGGALELEAAATFGSVTNNTTSSTTATTVFATAH 144

Query: 181 -LPRTIFNEDMRRP-SNIFSRMLQISPISKMSTSPCDMISTVLS-SPRVANKTTTTSCSS 351
            +     N +MRRP  NIFS M+QISP +K+  SP D  +T ++ SPR        S   
Sbjct: 145 KILEEHDNNNMRRPCKNIFSNMIQISPNAKLPISPYDSTNTAMAPSPRPIKPPALVS--- 201

Query: 352 LANETIKSNSSTSCSMESVAMMQISSPRNPGIKRRKSQAKKVVCIPAPAAANS 510
             N  + +N+S  C +++  + QISSPRNPG+KRRK+QAKKVVCIPAPAAANS
Sbjct: 202 -PNMVMNANTSKECLVDTTGV-QISSPRNPGLKRRKNQAKKVVCIPAPAAANS 252


>ref|XP_002317080.1| predicted protein [Populus trichocarpa] gi|222860145|gb|EEE97692.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  113 bits (282), Expect = 2e-23
 Identities = 73/179 (40%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
 Frame = +1

Query: 13  IDNFGDPFSNMHDPLLDELGIGSSSFFDRRNSSTSSGVVKMNIEENNPSSLNSTSHLPRT 192
           ++ FGDPF N+ DPLL EL + +SS+F  R SST   +   ++++++ S+    ++    
Sbjct: 50  VNAFGDPFCNLRDPLLHELNVAASSYFSSR-SSTDHMLSTTSVDQDHTSNNFVGANSATA 108

Query: 193 IFNE-DMRRPS--------NIFSRMLQISPIS---KMSTSPCDM-ISTVLSSPRVANKTT 333
           +F + +M + +        NIFSR +QISP +   K+  SPC+  +    SSPR    + 
Sbjct: 109 VFEDHEMHKAAAAATTSRRNIFSR-IQISPTTNPTKLPVSPCNSPVIAACSSPRGFRPSA 167

Query: 334 TTSCSSLANETIKSNSSTSCSMESVAMMQISSPRNPGIKRRKSQAKKVVCIPAPAAANS 510
             S     ++ I  N+S  C +++   +QISSP N GIKRRKSQAKKVVCIPAPAAANS
Sbjct: 168 MVS-----SDVINVNNSKGCLIDNAGSVQISSPTNLGIKRRKSQAKKVVCIPAPAAANS 221


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